RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 UFD1Q92890 307 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 PTX4Q96A99 478 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 RHOVQ96L33 236 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 GON7Q9BXV9 100 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 CCDC90BQ9GZT6 254 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 PLGRKTQ9HBL7 147 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 C8orf4Q9NR00 106 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 PGPEP1Q9NXJ5 209 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 RDH8Q9NYR8 311 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 ABRACLQ9P1F3 81 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 SELENOKQ9Y6D0 94 aa6.2□□□□□ -1.42
USP48-207ENST00000471752 TRDCB7Z8K6 153 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 LINC01619G3V211 115 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 M0R1X1 148 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 BET1O15155 118 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 DENRO43583 198 aaKnown RBP6.19□□□□□ -1.42
USP48-207ENST00000471752 RGS10O43665 173 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 RAMP3O60896 148 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 RGS11O94810 467 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 PRH1P02810 166 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 GSTP1P09211 210 aaKnown RBP6.19□□□□□ -1.42
USP48-207ENST00000471752 LGALS1P09382 135 aaKnown RBP6.19□□□□□ -1.42
USP48-207ENST00000471752 CPEP16870 476 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 EDN2P20800 178 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 TAGLNQ01995 201 aaKnown RBP6.19□□□□□ -1.42
USP48-207ENST00000471752 PLGLAQ15195 96 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 ACTBL2Q562R1 376 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 ACSM6Q6P461 480 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 CD200R1LQ6Q8B3 271 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 ZNF562Q6V9R5 426 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 GRPEL2Q8TAA5 225 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 GPHA2Q96T91 129 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 MGLLQ99685 303 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 CMSS1Q9BQ75 279 aaKnown RBP6.19□□□□□ -1.42
USP48-207ENST00000471752 GPR61Q9BZJ8 451 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 ISYNA1Q9NPH2 558 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 SDHAF2Q9NX18 166 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 PIPOXQ9P0Z9 390 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 KIAA1456Q9P272 454 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 STEAP1Q9UHE8 339 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 HSF4Q9ULV5 492 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 FOXA2Q9Y261 457 aaPredicted RBP6.19□□□□□ -1.42
USP48-207ENST00000471752 WASHC3Q9Y3C0 194 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 LRRC42Q9Y546 428 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 DNAH10Q8IVF4 4471 aa6.19□□□□□ -1.42
USP48-207ENST00000471752 ALMS1Q8TCU4 4167 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 IZUMO1RA6ND01 250 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 OR5H14A6NHG9 310 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 LINC00473A8K010 186 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 RAB27BO00194 218 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 HSPA12AO43301 675 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 TRGV3P03979 118 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 OR8U8P0C7N1 319 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 FRMD6-AS1P0C7T7 363 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 PTHLHP12272 177 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 ZBTB25P24278 435 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 BRWD1-AS2P59051 145 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 FXYD3Q14802 87 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 AKIRIN2Q53H80 203 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 ADAMTSL5Q6ZMM2 481 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 IDO2Q6ZQW0 420 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 BVESQ8NE79 360 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 CHCHD6Q9BRQ6 235 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 RNF167Q9H6Y7 350 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 RAB9BQ9NP90 201 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 SCN3BQ9NY72 215 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 V9GY05 133 aa6.18□□□□□ -1.42
USP48-207ENST00000471752 TRBV6-7A0A0A0MS04 114 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 E7EUB6 86 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 ITGB1BP1O14713 200 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 FABP7O15540 132 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 HSPB1P04792 205 aaKnown RBP6.17□□□□□ -1.42
USP48-207ENST00000471752 TFAP2AP05549 437 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 FCGR3AP08637 254 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 CLEC2LP0C7M8 214 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 NHLRC4P0CG21 123 aaPredicted RBP6.17□□□□□ -1.42
USP48-207ENST00000471752 OR5H8P0DN80 308 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 GP9P14770 177 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 MYOD1P15172 320 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 MC5RP33032 325 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 TPPP2P59282 170 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 RPL30P62888 115 aaKnown RBP6.17□□□□□ -1.42
USP48-207ENST00000471752 MLLT11Q13015 90 aaPredicted RBP6.17□□□□□ -1.42
USP48-207ENST00000471752 DYRK1AQ13627 763 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 SRSF7Q16629 238 aaKnown RBP eCLIP6.17□□□□□ -1.423e-8■□□□□ 10.9
USP48-207ENST00000471752 C10orf55Q5SWW7 151 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 FAM71F2Q6NXP2 309 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 IZUMO2Q6UXV1 221 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 PRSS48Q7RTY5 328 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 ZNF429Q86V71 674 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 OR10R2Q8NGX6 335 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 EDARADDQ8WWZ3 215 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 CNBD2Q96M20 576 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 URM1Q9BTM9 101 aaKnown RBP6.17□□□□□ -1.42
USP48-207ENST00000471752 OR2D2Q9H210 308 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 RIMS4Q9H426 269 aaPredicted RBP6.17□□□□□ -1.42
USP48-207ENST00000471752 C12orf4Q9NQ89 552 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.17□□□□□ -1.42
USP48-207ENST00000471752 ZNF355PQ9NSJ1 428 aa6.17□□□□□ -1.42
USP48-207ENST00000471752 SLC35D1Q9NTN3 355 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms