RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 MYCNOSP40205 109 aa12.29□□□□□ -0.44
HDAC6-218ENST00000470942 PSG5Q15238 335 aa12.29□□□□□ -0.44
HDAC6-218ENST00000470942 ECSCRQ19T08 205 aa12.29□□□□□ -0.44
HDAC6-218ENST00000470942 ZNF660Q6AZW8 331 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-218ENST00000470942 TMEM65Q6PI78 240 aa12.29□□□□□ -0.44
HDAC6-218ENST00000470942 ETV3LQ6ZN32 361 aa12.29□□□□□ -0.44
HDAC6-218ENST00000470942 CROCCP3Q8IVE0 287 aa12.29□□□□□ -0.44
HDAC6-218ENST00000470942 MRPL41Q8IXM3 137 aaKnown RBP12.29□□□□□ -0.44
HDAC6-218ENST00000470942 LINC00482Q8N8I6 264 aa12.29□□□□□ -0.44
HDAC6-218ENST00000470942 RCC1LQ96I51 464 aaKnown RBP12.29□□□□□ -0.44
HDAC6-218ENST00000470942 DUX3Q96PT4 197 aa12.29□□□□□ -0.44
HDAC6-218ENST00000470942 DIABLOQ9NR28 239 aa12.29□□□□□ -0.44
HDAC6-218ENST00000470942 SPATA2Q9UM82 520 aa12.29□□□□□ -0.44
HDAC6-218ENST00000470942 A3GALT2U3KPV4 340 aa12.29□□□□□ -0.44
HDAC6-218ENST00000470942 SSX5O60225 188 aa12.28□□□□□ -0.44
HDAC6-218ENST00000470942 RPS19P39019 145 aaKnown RBP12.28□□□□□ -0.44
HDAC6-218ENST00000470942 CDX1P47902 265 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-218ENST00000470942 CX3CL1P78423 397 aa12.28□□□□□ -0.44
HDAC6-218ENST00000470942 CBX3Q13185 183 aa12.28□□□□□ -0.44
HDAC6-218ENST00000470942 CNIH2Q6PI25 160 aa12.28□□□□□ -0.44
HDAC6-218ENST00000470942 RNF152Q8N8N0 203 aa12.28□□□□□ -0.44
HDAC6-218ENST00000470942 C5orf30Q96GV9 206 aa12.28□□□□□ -0.44
HDAC6-218ENST00000470942 A0A0A6YYH2 397 aa12.27□□□□□ -0.45
HDAC6-218ENST00000470942 A6NJ64 397 aa12.27□□□□□ -0.45
HDAC6-218ENST00000470942 TMEM127O75204 238 aa12.27□□□□□ -0.45
HDAC6-218ENST00000470942 SPDEFO95238 335 aa12.27□□□□□ -0.45
HDAC6-218ENST00000470942 NFYAP23511 347 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-218ENST00000470942 PSMB8P28062 276 aa12.27□□□□□ -0.45
HDAC6-218ENST00000470942 PPIFP30405 207 aaKnown RBP12.27□□□□□ -0.45
HDAC6-218ENST00000470942 LUMP51884 338 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-218ENST00000470942 RAB25P57735 213 aa12.27□□□□□ -0.45
HDAC6-218ENST00000470942 NDPQ00604 133 aa12.27□□□□□ -0.45
HDAC6-218ENST00000470942 TAGLNQ01995 201 aaKnown RBP12.27□□□□□ -0.45
HDAC6-218ENST00000470942 DEFB136Q30KP8 78 aa12.27□□□□□ -0.45
HDAC6-218ENST00000470942 FOXB2Q5VYV0 432 aa12.27□□□□□ -0.45
HDAC6-218ENST00000470942 BVESQ8NE79 360 aa12.27□□□□□ -0.45
HDAC6-218ENST00000470942 RAX2Q96IS3 184 aa12.27□□□□□ -0.45
HDAC6-218ENST00000470942 NECAP2Q9NVZ3 263 aa12.27□□□□□ -0.45
HDAC6-218ENST00000470942 ANXA10Q9UJ72 324 aa12.27□□□□□ -0.45
HDAC6-218ENST00000470942 OR2W1Q9Y3N9 320 aa12.27□□□□□ -0.45
HDAC6-218ENST00000470942 A0A1W2PN81 502 aa12.26□□□□□ -0.45
HDAC6-218ENST00000470942 CCL24O00175 119 aa12.26□□□□□ -0.45
HDAC6-218ENST00000470942 SLC25A17O43808 307 aa12.26□□□□□ -0.45
HDAC6-218ENST00000470942 DUS4LO95620 317 aaKnown RBP12.26□□□□□ -0.45
HDAC6-218ENST00000470942 CA2P00918 260 aa12.26□□□□□ -0.45
HDAC6-218ENST00000470942 CHRNA7P36544 502 aa12.26□□□□□ -0.45
HDAC6-218ENST00000470942 ARPC4P59998 168 aa12.26□□□□□ -0.45
HDAC6-218ENST00000470942 TMEM267Q0VDI3 215 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-218ENST00000470942 RTL8BQ17RB0 113 aa12.26□□□□□ -0.45
HDAC6-218ENST00000470942 PPP1R27Q86WC6 154 aa12.26□□□□□ -0.45
HDAC6-218ENST00000470942 S100A16Q96FQ6 103 aaKnown RBP12.26□□□□□ -0.45
HDAC6-218ENST00000470942 ADTRPQ96IZ2 230 aa12.26□□□□□ -0.45
HDAC6-218ENST00000470942 P2RX4Q99571 388 aa12.26□□□□□ -0.45
HDAC6-218ENST00000470942 FAM103A1Q9BTL3 118 aaKnown RBP12.26□□□□□ -0.45
HDAC6-218ENST00000470942 KLK15Q9H2R5 256 aa12.26□□□□□ -0.45
HDAC6-218ENST00000470942 AUNIPQ9H7T9 357 aa12.26□□□□□ -0.45
HDAC6-218ENST00000470942 FBXO7Q9Y3I1 522 aa12.26□□□□□ -0.45
HDAC6-218ENST00000470942 TRIM64CA6NLI5 447 aa12.25□□□□□ -0.45
HDAC6-218ENST00000470942 SHOXO15266 292 aa12.25□□□□□ -0.45
HDAC6-218ENST00000470942 IGLV1-40P01703 118 aa12.25□□□□□ -0.45
HDAC6-218ENST00000470942 RRASP10301 218 aa12.25□□□□□ -0.45
HDAC6-218ENST00000470942 DUTP33316 252 aaKnown RBP12.25□□□□□ -0.45
HDAC6-218ENST00000470942 LGALS7P47929 136 aa12.25□□□□□ -0.45
HDAC6-218ENST00000470942 UNQ5815/PRO19632Q6UWF5 114 aa12.25□□□□□ -0.45
HDAC6-218ENST00000470942 ZNF562Q6V9R5 426 aa12.25□□□□□ -0.45
HDAC6-218ENST00000470942 REC114Q7Z4M0 266 aa12.25□□□□□ -0.45
HDAC6-218ENST00000470942 GVQW1Q8N7I0 195 aa12.25□□□□□ -0.45
HDAC6-218ENST00000470942 MINDY2Q8NBR6 621 aa12.25□□□□□ -0.45
HDAC6-218ENST00000470942 BEST4Q8NFU0 473 aa12.25□□□□□ -0.45
HDAC6-218ENST00000470942 HARBI1Q96MB7 349 aa12.25□□□□□ -0.45
HDAC6-218ENST00000470942 FUNDC2Q9BWH2 189 aa12.25□□□□□ -0.45
HDAC6-218ENST00000470942 TPSG1Q9NRR2 321 aa12.25□□□□□ -0.45
HDAC6-218ENST00000470942 NUBP2Q9Y5Y2 271 aa12.25□□□□□ -0.45
HDAC6-218ENST00000470942 TUSC2O75896 110 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 CNIH1O95406 144 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 HLA-DQB1P01920 261 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 FCER2P06734 321 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 EGR2P11161 476 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-218ENST00000470942 PTHLHP12272 177 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 RAB9AP51151 201 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 CRIP2P52943 208 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-218ENST00000470942 GNB1P62873 340 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 TMEM177Q53S58 311 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 UBE2NLQ5JXB2 153 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 HOGA1Q86XE5 327 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 ZNF645Q8N7E2 425 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 TCTEX1D1Q8N7M0 179 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 SAMD12Q8N8I0 201 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 ZNF491Q8N8L2 437 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 LFNGQ8NES3 379 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 DNAH3Q8TD57 4116 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 C4orf3Q8WVX3 66 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 OR5B12Q96R08 314 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 MCRIP2Q9BUT9 160 aaKnown RBP12.24□□□□□ -0.45
HDAC6-218ENST00000470942 GPR61Q9BZJ8 451 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 AURKAIP1Q9NWT8 199 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-218ENST00000470942 FOXA2Q9Y261 457 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-218ENST00000470942 VSIG4Q9Y279 399 aa12.24□□□□□ -0.45
HDAC6-218ENST00000470942 PRKDCP78527 4128 aaKnown RBP12.23□□□□□ -0.45
HDAC6-218ENST00000470942 LINC00473A8K010 186 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms