RNA–Protein interactions for RNA: ENST00000470543.1

HIGD1A-205, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2

Gene HIGD1A, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-205ENST00000470543 MAP2K4P45985 399 aa9.37□□□□□ -0.91
HIGD1A-205ENST00000470543 APOC4P55056 127 aa9.37□□□□□ -0.91
HIGD1A-205ENST00000470543 EWSR1Q01844 656 aaKnown RBP eCLIP9.37□□□□□ -0.91
HIGD1A-205ENST00000470543 PJVKQ0ZLH3 352 aa9.37□□□□□ -0.91
HIGD1A-205ENST00000470543 DEFB135Q30KP9 77 aa9.37□□□□□ -0.91
HIGD1A-205ENST00000470543 Q499Y3 187 aa9.37□□□□□ -0.91
HIGD1A-205ENST00000470543 C1orf146Q5VVC0 180 aa9.37□□□□□ -0.91
HIGD1A-205ENST00000470543 ZNF57Q68EA5 555 aaPredicted RBP9.37□□□□□ -0.91
HIGD1A-205ENST00000470543 SVOPQ8N4V2 548 aa9.37□□□□□ -0.91
HIGD1A-205ENST00000470543 ZNF383Q8NA42 475 aa9.37□□□□□ -0.91
HIGD1A-205ENST00000470543 PHLDA1Q8WV24 401 aaPredicted RBP9.37□□□□□ -0.91
HIGD1A-205ENST00000470543 RPL36Q9Y3U8 105 aaKnown RBP9.37□□□□□ -0.91
HIGD1A-205ENST00000470543 A0A1W2PPK0 400 aa9.36□□□□□ -0.91
HIGD1A-205ENST00000470543 EI24O14681 340 aa9.36□□□□□ -0.91
HIGD1A-205ENST00000470543 ITGB1BP1O14713 200 aa9.36□□□□□ -0.91
HIGD1A-205ENST00000470543 SCAF4O95104 1147 aaKnown RBP9.36□□□□□ -0.91
HIGD1A-205ENST00000470543 TNXAQ16473 311 aa9.36□□□□□ -0.91
HIGD1A-205ENST00000470543 FAM209BQ5JX69 171 aa9.36□□□□□ -0.91
HIGD1A-205ENST00000470543 TMEM61Q8N0U2 210 aa9.36□□□□□ -0.91
HIGD1A-205ENST00000470543 NKAIN3Q8N8D7 197 aa9.36□□□□□ -0.91
HIGD1A-205ENST00000470543 ADAD2Q8NCV1 583 aaKnown RBP9.36□□□□□ -0.91
HIGD1A-205ENST00000470543 KCNG3Q8TAE7 436 aa9.36□□□□□ -0.91
HIGD1A-205ENST00000470543 ACOT12Q8WYK0 555 aa9.36□□□□□ -0.91
HIGD1A-205ENST00000470543 FAAP24Q9BTP7 215 aa9.36□□□□□ -0.91
HIGD1A-205ENST00000470543 C11orf54Q9H0W9 315 aaPredicted RBP9.36□□□□□ -0.91
HIGD1A-205ENST00000470543 AKIP1Q9NQ31 210 aa9.36□□□□□ -0.91
HIGD1A-205ENST00000470543 OR1A1Q9P1Q5 309 aa9.36□□□□□ -0.91
HIGD1A-205ENST00000470543 ZNF230Q9UIE0 474 aaPredicted RBP9.36□□□□□ -0.91
HIGD1A-205ENST00000470543 TP53TG1Q9Y2A0 90 aa9.36□□□□□ -0.91
HIGD1A-205ENST00000470543 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 TRBV5-5A0A0J9YX44 114 aa9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 MSGN1A6NI15 193 aa9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 PPP5D1E7EU14 171 aa9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 DYNC1I1O14576 645 aa9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 SHOXO15266 292 aa9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 PRH1P02810 166 aa9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 ALPLP05186 524 aa9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 LIMS3P0CW19 117 aa9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 LIMS4P0CW20 117 aa9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 MYL12AP19105 171 aa9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 EDN2P20800 178 aa9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 HLA-DRB3P79483 266 aa9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 SSBP2P81877 361 aaPredicted RBP9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 YIF1BQ5BJH7 314 aa9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 OR2G6Q5TZ20 316 aa9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 C6orf201Q7Z4U5 140 aa9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 WFDC3Q8IUB2 231 aa9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 CACNG8Q8WXS5 425 aa9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 AGMATQ9BSE5 352 aa9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 EXOSC1Q9Y3B2 195 aaKnown RBP9.35□□□□□ -0.91
HIGD1A-205ENST00000470543 KIAA1109Q2LD37 5005 aa9.34□□□□□ -0.91
HIGD1A-205ENST00000470543 ZNF320A2RRD8 509 aa9.34□□□□□ -0.91
HIGD1A-205ENST00000470543 GGCTO75223 188 aaKnown RBP9.34□□□□□ -0.91
HIGD1A-205ENST00000470543 RBMXL2O75526 392 aaKnown RBP9.34□□□□□ -0.91
HIGD1A-205ENST00000470543 ACTL6BO94805 426 aa9.34□□□□□ -0.91
HIGD1A-205ENST00000470543 IGLV2-23P01705 113 aa9.34□□□□□ -0.91
HIGD1A-205ENST00000470543 ATF4P18848 351 aaPredicted RBP9.34□□□□□ -0.91
HIGD1A-205ENST00000470543 LINC00205P59089 165 aa9.34□□□□□ -0.91
HIGD1A-205ENST00000470543 RTL8BQ17RB0 113 aa9.34□□□□□ -0.91
HIGD1A-205ENST00000470543 VMA21Q3ZAQ7 101 aa9.34□□□□□ -0.91
HIGD1A-205ENST00000470543 GLT8D1Q68CQ7 371 aa9.34□□□□□ -0.91
HIGD1A-205ENST00000470543 Q6ZWC4 215 aa9.34□□□□□ -0.91
HIGD1A-205ENST00000470543 CDH26Q8IXH8 852 aa9.34□□□□□ -0.91
HIGD1A-205ENST00000470543 SRSF12Q8WXF0 261 aaKnown RBP9.34□□□□□ -0.91
HIGD1A-205ENST00000470543 TMEM59Q9BXS4 323 aa9.34□□□□□ -0.91
HIGD1A-205ENST00000470543 GHRLQ9UBU3 117 aa9.34□□□□□ -0.91
HIGD1A-205ENST00000470543 MGAT4AQ9UM21 535 aa9.34□□□□□ -0.91
HIGD1A-205ENST00000470543 HECTD4Q9Y4D8 3996 aa9.34□□□□□ -0.91
HIGD1A-205ENST00000470543 RYR1P21817 5038 aa9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 ATP8B1O43520 1251 aa9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 HLA-AP01891 365 aaKnown RBP9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 UBBP0CG47 229 aa9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 GABRB1P18505 474 aa9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 CBLN1P23435 193 aa9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 ETV1P50549 477 aa9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 MED22Q15528 200 aa9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 C15orf32Q32M92 178 aa9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 TM4SF20Q53R12 229 aa9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 RBPMS2Q6ZRY4 209 aaKnown RBP9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 STPG3Q8N7X2 389 aa9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 ZFP41Q8N8Y5 198 aa9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 NECAP1Q8NC96 275 aa9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 OR1L6Q8NGR2 347 aa9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 SLC7A6OSQ96CW6 309 aaPredicted RBP9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 UQCC2Q9BRT2 126 aa9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 PLEKHJ1Q9NW61 149 aa9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 BABAM2Q9NXR7 383 aa9.33□□□□□ -0.92
HIGD1A-205ENST00000470543 PNMA8CA0A1B0GUJ8 204 aa9.32□□□□□ -0.92
HIGD1A-205ENST00000470543 LGALS9O00182 355 aa9.32□□□□□ -0.92
HIGD1A-205ENST00000470543 UBE2CO00762 179 aa9.32□□□□□ -0.92
HIGD1A-205ENST00000470543 OGG1O15527 345 aa9.32□□□□□ -0.92
HIGD1A-205ENST00000470543 CREBL2O60519 120 aaPredicted RBP9.32□□□□□ -0.92
HIGD1A-205ENST00000470543 OR2J3O76001 311 aa9.32□□□□□ -0.92
HIGD1A-205ENST00000470543 OR2C1O95371 312 aa9.32□□□□□ -0.92
HIGD1A-205ENST00000470543 NAPSAO96009 420 aa9.32□□□□□ -0.92
HIGD1A-205ENST00000470543 IFNA4P05014 189 aa9.32□□□□□ -0.92
HIGD1A-205ENST00000470543 ARL3P36405 182 aa9.32□□□□□ -0.92
HIGD1A-205ENST00000470543 MED21Q13503 144 aa9.32□□□□□ -0.92
HIGD1A-205ENST00000470543 FAM106AQ4KMX7 169 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms