RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 TUSC2O75896 110 aa11.08□□□□□ -0.64
TOP3B-215ENST00000470338 SPDEFO95238 335 aa11.08□□□□□ -0.64
TOP3B-215ENST00000470338 NFYAP23511 347 aaPredicted RBP11.08□□□□□ -0.64
TOP3B-215ENST00000470338 PPIFP30405 207 aaKnown RBP11.08□□□□□ -0.64
TOP3B-215ENST00000470338 ALDH3B2P48448 385 aa11.08□□□□□ -0.64
TOP3B-215ENST00000470338 THBS3P49746 956 aa11.08□□□□□ -0.64
TOP3B-215ENST00000470338 LUMP51884 338 aaPredicted RBP11.08□□□□□ -0.64
TOP3B-215ENST00000470338 CRIP2P52943 208 aaPredicted RBP11.08□□□□□ -0.64
TOP3B-215ENST00000470338 RPS16P62249 146 aaKnown RBP11.08□□□□□ -0.64
TOP3B-215ENST00000470338 CTF1Q16619 201 aa11.08□□□□□ -0.64
TOP3B-215ENST00000470338 GVQW1Q8N7I0 195 aa11.08□□□□□ -0.64
TOP3B-215ENST00000470338 SAMD12Q8N8I0 201 aa11.08□□□□□ -0.64
TOP3B-215ENST00000470338 DDB2Q92466 427 aa11.08□□□□□ -0.64
TOP3B-215ENST00000470338 FLYWCH2Q96CP2 140 aaKnown RBP11.08□□□□□ -0.64
TOP3B-215ENST00000470338 TSNAXQ99598 290 aaKnown RBP11.08□□□□□ -0.64
TOP3B-215ENST00000470338 TNCP24821 2201 aa11.08□□□□□ -0.64
TOP3B-215ENST00000470338 G3V318 75 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 G3V4G9 280 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 SLC22A5O76082 557 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 GABARAPO95166 117 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 RPLP1P05386 114 aaKnown RBP11.07□□□□□ -0.64
TOP3B-215ENST00000470338 RRASP10301 218 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 PTHLHP12272 177 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 PSMB8P28062 276 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 DUTP33316 252 aaKnown RBP11.07□□□□□ -0.64
TOP3B-215ENST00000470338 CBX5P45973 191 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 CDX1P47902 265 aaPredicted RBP11.07□□□□□ -0.64
TOP3B-215ENST00000470338 LGALS7P47929 136 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 CX3CL1P78423 397 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 PLGLAQ15195 96 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 BEAN1Q3B7T3 259 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 TMEM177Q53S58 311 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 C19orf54Q5BKX5 351 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 CXorf66Q5JRM2 361 aaPredicted RBP11.07□□□□□ -0.64
TOP3B-215ENST00000470338 KPRPQ5T749 579 aaPredicted RBP11.07□□□□□ -0.64
TOP3B-215ENST00000470338 ETV3LQ6ZN32 361 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 C18orf65Q6ZTR6 163 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 C1QL4Q86Z23 238 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 ZNF645Q8N7E2 425 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 MINDY2Q8NBR6 621 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 ADTRPQ96IZ2 230 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 CMTM3Q96MX0 182 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 NAA50Q9GZZ1 169 aaKnown RBP11.07□□□□□ -0.64
TOP3B-215ENST00000470338 PARP11Q9NR21 331 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 METTL1Q9UBP6 276 aaKnown RBP11.07□□□□□ -0.64
TOP3B-215ENST00000470338 NUBP2Q9Y5Y2 271 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 WSB1Q9Y6I7 421 aa11.07□□□□□ -0.64
TOP3B-215ENST00000470338 TRAV41A0A0B4J266 112 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 IGKV1D-13A0A0B4J2D9 117 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 LINC00473A8K010 186 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 WIPF1O43516 503 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 IGLV1-40P01703 118 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 IGLV2-14P01704 120 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 IGLV2-23P01705 113 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 PF4P02776 101 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 CRYGBP07316 175 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 IGKV1-13P0DP09 117 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 EGR2P11161 476 aaPredicted RBP11.06□□□□□ -0.64
TOP3B-215ENST00000470338 CD33P20138 364 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 NDPQ00604 133 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 ZNF562Q6V9R5 426 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 LCNL1Q6ZST4 164 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 ZNF695Q8IW36 515 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 BVESQ8NE79 360 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 MYOZ3Q8TDC0 251 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 ACOT12Q8WYK0 555 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 SNAPC3Q92966 411 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 COMMD3Q9UBI1 195 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 FBXO7Q9Y3I1 522 aa11.06□□□□□ -0.64
TOP3B-215ENST00000470338 DNAH3Q8TD57 4116 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 J3QRK9 145 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 SLC25A17O43808 307 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 APOA1P02647 267 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 EIF4EP06730 217 aaKnown RBP11.05□□□□□ -0.64
TOP3B-215ENST00000470338 MYCNOSP40205 109 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 RORCP51449 518 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 TAS2R20P59543 309 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 ARPC4P59998 168 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 KIAA0141Q14154 515 aaPredicted RBP11.05□□□□□ -0.64
TOP3B-215ENST00000470338 RTL8BQ17RB0 113 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 OXLD1Q5BKU9 147 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 TMEM69Q5SWH9 247 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 GPR107Q5VW38 600 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 C8orf86Q6ZUL3 223 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 LINC00482Q8N8I6 264 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 KLHL30-AS1Q8NEE0 82 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 OR5AP2Q8NGF4 316 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 CLCC1Q96S66 551 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 NECAP2Q9NVZ3 263 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 ANAPC10Q9UM13 185 aa11.05□□□□□ -0.64
TOP3B-215ENST00000470338 RBMX2Q9Y388 322 aaKnown RBP11.05□□□□□ -0.64
TOP3B-215ENST00000470338 SRRM4A7MD48 611 aaKnown RBP11.04□□□□□ -0.64
TOP3B-215ENST00000470338 NUDT19A8MXV4 375 aa11.04□□□□□ -0.64
TOP3B-215ENST00000470338 FCGR2CP31995 323 aa11.04□□□□□ -0.64
TOP3B-215ENST00000470338 CBX3Q13185 183 aa11.04□□□□□ -0.64
TOP3B-215ENST00000470338 EIF4EBP1Q13541 118 aaPredicted RBP11.04□□□□□ -0.64
TOP3B-215ENST00000470338 AKIRIN2Q53H80 203 aa11.04□□□□□ -0.64
TOP3B-215ENST00000470338 GPR141Q7Z602 305 aa11.04□□□□□ -0.64
TOP3B-215ENST00000470338 PPP1R27Q86WC6 154 aa11.04□□□□□ -0.64
TOP3B-215ENST00000470338 MRPL41Q8IXM3 137 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms