RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 RAB2AP61019 212 aa12.22□□□□□ -0.45
CBWD3-205ENST00000469687 MSMO1Q15800 293 aa12.22□□□□□ -0.45
CBWD3-205ENST00000469687 NCR3LG1Q68D85 454 aa12.22□□□□□ -0.45
CBWD3-205ENST00000469687 ZNF343Q6P1L6 599 aa12.22□□□□□ -0.45
CBWD3-205ENST00000469687 MUCL1Q96DR8 90 aa12.22□□□□□ -0.45
CBWD3-205ENST00000469687 OR2V2Q96R30 315 aa12.22□□□□□ -0.45
CBWD3-205ENST00000469687 C12orf57Q99622 126 aa12.22□□□□□ -0.45
CBWD3-205ENST00000469687 UNKLQ9H9P5 680 aaKnown RBP12.22□□□□□ -0.45
CBWD3-205ENST00000469687 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.22□□□□□ -0.45
CBWD3-205ENST00000469687 ZFHX2Q9C0A1 2572 aaPredicted RBP12.21□□□□□ -0.45
CBWD3-205ENST00000469687 TM4SF5O14894 197 aa12.21□□□□□ -0.45
CBWD3-205ENST00000469687 HMGB3O15347 200 aaKnown RBP12.21□□□□□ -0.45
CBWD3-205ENST00000469687 RBMXL2O75526 392 aaKnown RBP12.21□□□□□ -0.45
CBWD3-205ENST00000469687 CLDN14O95500 239 aa12.21□□□□□ -0.45
CBWD3-205ENST00000469687 SELLP14151 372 aa12.21□□□□□ -0.45
CBWD3-205ENST00000469687 TUBG1P23258 451 aa12.21□□□□□ -0.45
CBWD3-205ENST00000469687 RAB11AP62491 216 aa12.21□□□□□ -0.45
CBWD3-205ENST00000469687 TLE1Q04724 770 aa12.21□□□□□ -0.45
CBWD3-205ENST00000469687 EIF2S3LQ2VIR3 472 aaKnown RBP12.21□□□□□ -0.45
CBWD3-205ENST00000469687 FAM90A2PQ658T7 463 aa12.21□□□□□ -0.45
CBWD3-205ENST00000469687 C22orf34Q6ZV56 151 aa12.21□□□□□ -0.45
CBWD3-205ENST00000469687 H2BFWTQ7Z2G1 175 aa12.21□□□□□ -0.45
CBWD3-205ENST00000469687 MOGAT3Q86VF5 341 aa12.21□□□□□ -0.45
CBWD3-205ENST00000469687 ZNF561Q8N587 486 aa12.21□□□□□ -0.45
CBWD3-205ENST00000469687 DTD1Q8TEA8 209 aa12.21□□□□□ -0.45
CBWD3-205ENST00000469687 MBD3L1Q8WWY6 194 aa12.21□□□□□ -0.45
CBWD3-205ENST00000469687 TUBG2Q9NRH3 451 aa12.21□□□□□ -0.45
CBWD3-205ENST00000469687 RAI1Q7Z5J4 1906 aaPredicted RBP12.21□□□□□ -0.46
CBWD3-205ENST00000469687 C5orf52A6NGY3 159 aa12.2□□□□□ -0.46
CBWD3-205ENST00000469687 SPINT2O43291 252 aa12.2□□□□□ -0.46
CBWD3-205ENST00000469687 SPRY3O43610 288 aa12.2□□□□□ -0.46
CBWD3-205ENST00000469687 OR8U8P0C7N1 319 aa12.2□□□□□ -0.46
CBWD3-205ENST00000469687 BCL2P10415 239 aa12.2□□□□□ -0.46
CBWD3-205ENST00000469687 TMEM41BQ5BJD5 291 aa12.2□□□□□ -0.46
CBWD3-205ENST00000469687 ACSM6Q6P461 480 aa12.2□□□□□ -0.46
CBWD3-205ENST00000469687 IGF2-ASQ6U949 168 aa12.2□□□□□ -0.46
CBWD3-205ENST00000469687 RPP25LQ8N5L8 163 aaKnown RBP12.2□□□□□ -0.46
CBWD3-205ENST00000469687 FAM234AQ9H0X4 552 aa12.2□□□□□ -0.46
CBWD3-205ENST00000469687 MARCH11A6NNE9 402 aa12.2□□□□□ -0.46
CBWD3-205ENST00000469687 SERF2P84101 59 aa12.2□□□□□ -0.46
CBWD3-205ENST00000469687 NIPSNAP3BQ9BS92 247 aa12.2□□□□□ -0.46
CBWD3-205ENST00000469687 URGCP-MRPS24S4R325 110 aa12.2□□□□□ -0.46
CBWD3-205ENST00000469687 TANC2Q9HCD6 1990 aa12.2□□□□□ -0.46
CBWD3-205ENST00000469687 ADGRG4Q8IZF6 3080 aa12.2□□□□□ -0.46
CBWD3-205ENST00000469687 MAP1LC3B2A6NCE7 125 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 RAB29O14966 203 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 OR9G9P0C7N8 305 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 DEFA4P12838 97 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 ZNF134P52741 427 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 HTD2P86397 168 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 TFF3Q07654 80 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 HEPN1Q6WQI6 88 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 RBMS3Q6XE24 437 aaKnown RBP12.19□□□□□ -0.46
CBWD3-205ENST00000469687 SSX9Q7RTT3 188 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 CA5BP1Q8WTZ4 195 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 MAP1LC3BQ9GZQ8 125 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 CISD1Q9NZ45 108 aaKnown RBP12.19□□□□□ -0.46
CBWD3-205ENST00000469687 GNG12Q9UBI6 72 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 WASF3Q9UPY6 502 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 DUTP33316 252 aaKnown RBP12.19□□□□□ -0.46
CBWD3-205ENST00000469687 MORN2Q502X0 79 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 RPL39P5Q59GN2 51 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 DUX4L9Q6RFH8 374 aaPredicted RBP12.19□□□□□ -0.46
CBWD3-205ENST00000469687 ZNF66Q6ZN08 573 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 ZGRF1Q86YA3 2104 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 FAM90A1Q86YD7 464 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 VKORC1L1Q8N0U8 176 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 FAM169BQ8N8A8 192 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 Q8TCH9 128 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 ITLN1Q8WWA0 313 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 LEAP2Q969E1 77 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 TVP23CQ96ET8 276 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 MEGF10Q96KG7 1140 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 HSD17B10Q99714 261 aaKnown RBP12.19□□□□□ -0.46
CBWD3-205ENST00000469687 QTRT1Q9BXR0 403 aaKnown RBP12.19□□□□□ -0.46
CBWD3-205ENST00000469687 PARD6GQ9BYG4 376 aaPredicted RBP12.19□□□□□ -0.46
CBWD3-205ENST00000469687 SPTBN2O15020 2390 aa12.19□□□□□ -0.46
CBWD3-205ENST00000469687 CUL9Q8IWT3 2517 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 ANKRD11Q6UB99 2663 aaPredicted RBP12.18□□□□□ -0.46
CBWD3-205ENST00000469687 YLPM1P49750 1951 aaKnown RBP12.18□□□□□ -0.46
CBWD3-205ENST00000469687 FCGR3BO75015 233 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 IFNA4P05014 189 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 S100A6P06703 90 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 CXCL1P09341 107 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 GPR12P47775 334 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 EDDM3BP56851 147 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 ERVFRD-1P60508 538 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 PAX5Q02548 391 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 TIMM23BQ5SRD1 257 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 C1orf229Q6ZS94 237 aaPredicted RBP12.18□□□□□ -0.46
CBWD3-205ENST00000469687 Q8WTZ3 238 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 R3HDM4Q96D70 268 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 TMPRSS5Q9H3S3 457 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 SLC25A22Q9H936 323 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 GVINP1Q7Z2Y8 2422 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 CEBPZOSA8MTT3 80 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 SLC31A2O15432 143 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 ADH4P08319 380 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 MAS1LP35410 378 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 LOXL3P58215 753 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms