RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 PSMB8P28062 276 aa9.02□□□□□ -0.97
CDHR3-205ENST00000468143 MYCNOSP40205 109 aa9.02□□□□□ -0.97
CDHR3-205ENST00000468143 RAB25P57735 213 aa9.02□□□□□ -0.97
CDHR3-205ENST00000468143 NDPQ00604 133 aa9.02□□□□□ -0.97
CDHR3-205ENST00000468143 SRSF7Q16629 238 aaKnown RBP eCLIP9.02□□□□□ -0.97
CDHR3-205ENST00000468143 ECSCRQ19T08 205 aa9.02□□□□□ -0.97
CDHR3-205ENST00000468143 TMEM65Q6PI78 240 aa9.02□□□□□ -0.97
CDHR3-205ENST00000468143 Q6ZS49 121 aa9.02□□□□□ -0.97
CDHR3-205ENST00000468143 PDPNQ86YL7 162 aa9.02□□□□□ -0.97
CDHR3-205ENST00000468143 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.02□□□□□ -0.97
CDHR3-205ENST00000468143 BVESQ8NE79 360 aa9.02□□□□□ -0.97
CDHR3-205ENST00000468143 CASTOR1Q8WTX7 329 aa9.02□□□□□ -0.97
CDHR3-205ENST00000468143 OR5B12Q96R08 314 aa9.02□□□□□ -0.97
CDHR3-205ENST00000468143 RNF5Q99942 180 aa9.02□□□□□ -0.97
CDHR3-205ENST00000468143 VCX3AQ9NNX9 186 aa9.02□□□□□ -0.97
CDHR3-205ENST00000468143 TPSG1Q9NRR2 321 aa9.02□□□□□ -0.97
CDHR3-205ENST00000468143 CMYA5Q8N3K9 4069 aa9.02□□□□□ -0.97
CDHR3-205ENST00000468143 A0A1W2PN81 502 aa9.01□□□□□ -0.97
CDHR3-205ENST00000468143 SLC25A17O43808 307 aa9.01□□□□□ -0.97
CDHR3-205ENST00000468143 SCGNO76038 276 aa9.01□□□□□ -0.97
CDHR3-205ENST00000468143 CA2P00918 260 aa9.01□□□□□ -0.97
CDHR3-205ENST00000468143 HOXD3P31249 432 aaPredicted RBP9.01□□□□□ -0.97
CDHR3-205ENST00000468143 CHRNA7P36544 502 aa9.01□□□□□ -0.97
CDHR3-205ENST00000468143 CDX1P47902 265 aaPredicted RBP9.01□□□□□ -0.97
CDHR3-205ENST00000468143 PITPNAQ00169 270 aa9.01□□□□□ -0.97
CDHR3-205ENST00000468143 TIMM50Q3ZCQ8 353 aa9.01□□□□□ -0.97
CDHR3-205ENST00000468143 ZNF660Q6AZW8 331 aaPredicted RBP9.01□□□□□ -0.97
CDHR3-205ENST00000468143 GVQW1Q8N7I0 195 aa9.01□□□□□ -0.97
CDHR3-205ENST00000468143 RNF152Q8N8N0 203 aa9.01□□□□□ -0.97
CDHR3-205ENST00000468143 RCC1LQ96I51 464 aaKnown RBP9.01□□□□□ -0.97
CDHR3-205ENST00000468143 P2RX4Q99571 388 aa9.01□□□□□ -0.97
CDHR3-205ENST00000468143 TSNAXQ99598 290 aaKnown RBP9.01□□□□□ -0.97
CDHR3-205ENST00000468143 DCSTAMPQ9H295 470 aa9.01□□□□□ -0.97
CDHR3-205ENST00000468143 NECAP2Q9NVZ3 263 aa9.01□□□□□ -0.97
CDHR3-205ENST00000468143 AURKAIP1Q9NWT8 199 aaPredicted RBP9.01□□□□□ -0.97
CDHR3-205ENST00000468143 ETV7Q9Y603 341 aa9.01□□□□□ -0.97
CDHR3-205ENST00000468143 MEIS3P1A6NDR6 274 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 SOX15O60248 233 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 DIRAS3O95661 229 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 IGLV1-40P01703 118 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 IGLV2-23P01705 113 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 RAB9AP51151 201 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 SCAND1P57086 179 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 KRTAP10-11P60412 298 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 GNB1P62873 340 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 KIAA0141Q14154 515 aaPredicted RBP9□□□□□ -0.97
CDHR3-205ENST00000468143 UNQ5815/PRO19632Q6UWF5 114 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 PPP1R27Q86WC6 154 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 ZNF491Q8N8L2 437 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 MINDY2Q8NBR6 621 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 MRAPQ8TCY5 172 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 MS4A10Q96PG2 267 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 GNB4Q9HAV0 340 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 DIABLOQ9NR28 239 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 ANXA10Q9UJ72 324 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 ZNF580Q9UK33 172 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 SPATA2Q9UM82 520 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 OR2W1Q9Y3N9 320 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 NUBP2Q9Y5Y2 271 aa9□□□□□ -0.97
CDHR3-205ENST00000468143 IGKV1D-13A0A0B4J2D9 117 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 SRRM4A7MD48 611 aaKnown RBP8.99□□□□□ -0.97
CDHR3-205ENST00000468143 LINC00473A8K010 186 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 ARPC1BO15143 372 aaKnown RBP8.99□□□□□ -0.97
CDHR3-205ENST00000468143 SHOXO15266 292 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 TUSC2O75896 110 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 CTXN2P0C2S0 81 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 IGKV1-13P0DP09 117 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 SLC6A1P30531 599 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 DUTP33316 252 aaKnown RBP8.99□□□□□ -0.97
CDHR3-205ENST00000468143 LUMP51884 338 aaPredicted RBP8.99□□□□□ -0.97
CDHR3-205ENST00000468143 VBP1P61758 197 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 NCS1P62166 190 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 PJVKQ0ZLH3 352 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 FXYD3Q14802 87 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 CNIH2Q6PI25 160 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 ZNF562Q6V9R5 426 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 LFNGQ8NES3 379 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 BEST4Q8NFU0 473 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 OR11H1Q8NG94 326 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 GRPEL2Q8TAA5 225 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 C4orf3Q8WVX3 66 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 HARBI1Q96MB7 349 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 FUNDC2Q9BWH2 189 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 AUNIPQ9H7T9 357 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 PLXNB1O43157 2135 aa8.99□□□□□ -0.97
CDHR3-205ENST00000468143 TRIM64CA6NLI5 447 aa8.98□□□□□ -0.97
CDHR3-205ENST00000468143 SPDEFO95238 335 aa8.98□□□□□ -0.97
CDHR3-205ENST00000468143 CNIH1O95406 144 aa8.98□□□□□ -0.97
CDHR3-205ENST00000468143 DUS4LO95620 317 aaKnown RBP8.98□□□□□ -0.97
CDHR3-205ENST00000468143 CRYZL1O95825 349 aa8.98□□□□□ -0.97
CDHR3-205ENST00000468143 HLA-DQB1P01920 261 aa8.98□□□□□ -0.97
CDHR3-205ENST00000468143 CRYGBP07316 175 aa8.98□□□□□ -0.97
CDHR3-205ENST00000468143 LGALS7P47929 136 aa8.98□□□□□ -0.97
CDHR3-205ENST00000468143 ARPC4P59998 168 aa8.98□□□□□ -0.97
CDHR3-205ENST00000468143 RPL30P62888 115 aaKnown RBP8.98□□□□□ -0.97
CDHR3-205ENST00000468143 TMEM267Q0VDI3 215 aaPredicted RBP8.98□□□□□ -0.97
CDHR3-205ENST00000468143 CBX3Q13185 183 aa8.98□□□□□ -0.97
CDHR3-205ENST00000468143 RTL8BQ17RB0 113 aa8.98□□□□□ -0.97
CDHR3-205ENST00000468143 TMEM177Q53S58 311 aa8.98□□□□□ -0.97
CDHR3-205ENST00000468143 C19orf54Q5BKX5 351 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms