RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 APOA2P02652 100 aa11.04□□□□□ -0.64
CCHCR1-211ENST00000467553 NFYAP23511 347 aaPredicted RBP11.04□□□□□ -0.64
CCHCR1-211ENST00000467553 MYCNOSP40205 109 aa11.04□□□□□ -0.64
CCHCR1-211ENST00000467553 THBS3P49746 956 aa11.04□□□□□ -0.64
CCHCR1-211ENST00000467553 RPL23AP62750 156 aaKnown RBP11.04□□□□□ -0.64
CCHCR1-211ENST00000467553 C5orf64Q2M2E5 130 aa11.04□□□□□ -0.64
CCHCR1-211ENST00000467553 UBE2NLQ5JXB2 153 aa11.04□□□□□ -0.64
CCHCR1-211ENST00000467553 VAX1Q5SQQ9 334 aa11.04□□□□□ -0.64
CCHCR1-211ENST00000467553 ANKRD13BQ86YJ7 626 aa11.04□□□□□ -0.64
CCHCR1-211ENST00000467553 NPBQ8NG41 125 aa11.04□□□□□ -0.64
CCHCR1-211ENST00000467553 CLCC1Q96S66 551 aa11.04□□□□□ -0.64
CCHCR1-211ENST00000467553 ANXA10Q9UJ72 324 aa11.04□□□□□ -0.64
CCHCR1-211ENST00000467553 GAB2Q9UQC2 676 aa11.04□□□□□ -0.64
CCHCR1-211ENST00000467553 MEIS3P1A6NDR6 274 aa11.03□□□□□ -0.64
CCHCR1-211ENST00000467553 K7EIL1 84 aa11.03□□□□□ -0.64
CCHCR1-211ENST00000467553 RRHO14718 337 aa11.03□□□□□ -0.64
CCHCR1-211ENST00000467553 XRCC3O43542 346 aa11.03□□□□□ -0.64
CCHCR1-211ENST00000467553 RBBP9O75884 186 aa11.03□□□□□ -0.64
CCHCR1-211ENST00000467553 NDUFA3O95167 84 aa11.03□□□□□ -0.64
CCHCR1-211ENST00000467553 LUMP51884 338 aaPredicted RBP11.03□□□□□ -0.64
CCHCR1-211ENST00000467553 ARPC4P59998 168 aa11.03□□□□□ -0.64
CCHCR1-211ENST00000467553 TEX38Q6PEX7 206 aa11.03□□□□□ -0.64
CCHCR1-211ENST00000467553 GPR141Q7Z602 305 aa11.03□□□□□ -0.64
CCHCR1-211ENST00000467553 MRPL41Q8IXM3 137 aaKnown RBP11.03□□□□□ -0.64
CCHCR1-211ENST00000467553 BEST4Q8NFU0 473 aa11.03□□□□□ -0.64
CCHCR1-211ENST00000467553 FLYWCH2Q96CP2 140 aaKnown RBP11.03□□□□□ -0.64
CCHCR1-211ENST00000467553 RNF5Q99942 180 aa11.03□□□□□ -0.64
CCHCR1-211ENST00000467553 SLC35D1Q9NTN3 355 aa11.03□□□□□ -0.64
CCHCR1-211ENST00000467553 OR2W1Q9Y3N9 320 aa11.03□□□□□ -0.64
CCHCR1-211ENST00000467553 WSB1Q9Y6I7 421 aa11.03□□□□□ -0.64
CCHCR1-211ENST00000467553 FCN1O00602 326 aa11.02□□□□□ -0.65
CCHCR1-211ENST00000467553 HLA-DRB1P01911 266 aa11.02□□□□□ -0.65
CCHCR1-211ENST00000467553 IGKV1-16P04430 117 aa11.02□□□□□ -0.65
CCHCR1-211ENST00000467553 VDAC1P21796 283 aa11.02□□□□□ -0.65
CCHCR1-211ENST00000467553 RORCP51449 518 aa11.02□□□□□ -0.65
CCHCR1-211ENST00000467553 PSG5Q15238 335 aa11.02□□□□□ -0.65
CCHCR1-211ENST00000467553 TMEM69Q5SWH9 247 aa11.02□□□□□ -0.65
CCHCR1-211ENST00000467553 LCNL1Q6ZST4 164 aa11.02□□□□□ -0.65
CCHCR1-211ENST00000467553 HOGA1Q86XE5 327 aa11.02□□□□□ -0.65
CCHCR1-211ENST00000467553 PDPNQ86YL7 162 aa11.02□□□□□ -0.65
CCHCR1-211ENST00000467553 BVESQ8NE79 360 aa11.02□□□□□ -0.65
CCHCR1-211ENST00000467553 KCTD12Q96CX2 325 aaKnown RBP11.02□□□□□ -0.65
CCHCR1-211ENST00000467553 C5orf30Q96GV9 206 aa11.02□□□□□ -0.65
CCHCR1-211ENST00000467553 TSNAXQ99598 290 aaKnown RBP11.02□□□□□ -0.65
CCHCR1-211ENST00000467553 OR51J1Q9H342 316 aa11.02□□□□□ -0.65
CCHCR1-211ENST00000467553 PARP11Q9NR21 331 aa11.02□□□□□ -0.65
CCHCR1-211ENST00000467553 METTL1Q9UBP6 276 aaKnown RBP11.02□□□□□ -0.65
CCHCR1-211ENST00000467553 IGHV7-81A0A0B4J1V7 117 aa11.01□□□□□ -0.65
CCHCR1-211ENST00000467553 SMIM31A0A1B0GVY4 71 aa11.01□□□□□ -0.65
CCHCR1-211ENST00000467553 NUDT19A8MXV4 375 aa11.01□□□□□ -0.65
CCHCR1-211ENST00000467553 ATP6V0E1O15342 81 aa11.01□□□□□ -0.65
CCHCR1-211ENST00000467553 HLA-DQB1P01920 261 aa11.01□□□□□ -0.65
CCHCR1-211ENST00000467553 EIF4EP06730 217 aaKnown RBP11.01□□□□□ -0.65
CCHCR1-211ENST00000467553 CBX5P45973 191 aa11.01□□□□□ -0.65
CCHCR1-211ENST00000467553 ALDH3B2P48448 385 aa11.01□□□□□ -0.65
CCHCR1-211ENST00000467553 TAS2R20P59543 309 aa11.01□□□□□ -0.65
CCHCR1-211ENST00000467553 CBX3Q13185 183 aa11.01□□□□□ -0.65
CCHCR1-211ENST00000467553 CTF1Q16619 201 aa11.01□□□□□ -0.65
CCHCR1-211ENST00000467553 DEFB121Q5J5C9 76 aa11.01□□□□□ -0.65
CCHCR1-211ENST00000467553 ETV3LQ6ZN32 361 aa11.01□□□□□ -0.65
CCHCR1-211ENST00000467553 ABHD5Q8WTS1 349 aa11.01□□□□□ -0.65
CCHCR1-211ENST00000467553 IFT46Q9NQC8 304 aa11.01□□□□□ -0.65
CCHCR1-211ENST00000467553 MRPS7Q9Y2R9 242 aaKnown RBP11.01□□□□□ -0.65
CCHCR1-211ENST00000467553 IGKV1D-13A0A0B4J2D9 117 aa11□□□□□ -0.65
CCHCR1-211ENST00000467553 G3V318 75 aa11□□□□□ -0.65
CCHCR1-211ENST00000467553 HPGDSO60760 199 aa11□□□□□ -0.65
CCHCR1-211ENST00000467553 RAMP3O60896 148 aa11□□□□□ -0.65
CCHCR1-211ENST00000467553 TUSC2O75896 110 aa11□□□□□ -0.65
CCHCR1-211ENST00000467553 GABARAPO95166 117 aa11□□□□□ -0.65
CCHCR1-211ENST00000467553 IGF1P05019 195 aa11□□□□□ -0.65
CCHCR1-211ENST00000467553 RPLP1P05386 114 aaKnown RBP11□□□□□ -0.65
CCHCR1-211ENST00000467553 IGKV1-13P0DP09 117 aa11□□□□□ -0.65
CCHCR1-211ENST00000467553 DUTP33316 252 aaKnown RBP11□□□□□ -0.65
CCHCR1-211ENST00000467553 KRTAP10-11P60412 298 aa11□□□□□ -0.65
CCHCR1-211ENST00000467553 TAGLNQ01995 201 aaKnown RBP11□□□□□ -0.65
CCHCR1-211ENST00000467553 CXorf66Q5JRM2 361 aaPredicted RBP11□□□□□ -0.65
CCHCR1-211ENST00000467553 ZNF660Q6AZW8 331 aaPredicted RBP11□□□□□ -0.65
CCHCR1-211ENST00000467553 MZT2AQ6P582 158 aa11□□□□□ -0.65
CCHCR1-211ENST00000467553 C18orf65Q6ZTR6 163 aa11□□□□□ -0.65
CCHCR1-211ENST00000467553 ZNF695Q8IW36 515 aa11□□□□□ -0.65
CCHCR1-211ENST00000467553 ZNF645Q8N7E2 425 aa11□□□□□ -0.65
CCHCR1-211ENST00000467553 ACOT12Q8WYK0 555 aa11□□□□□ -0.65
CCHCR1-211ENST00000467553 P2RX4Q99571 388 aa11□□□□□ -0.65
CCHCR1-211ENST00000467553 B9D2Q9BPU9 175 aa11□□□□□ -0.65
CCHCR1-211ENST00000467553 ZNF580Q9UK33 172 aa11□□□□□ -0.65
CCHCR1-211ENST00000467553 TRAV41A0A0B4J266 112 aa10.99□□□□□ -0.65
CCHCR1-211ENST00000467553 WI2-2373I1.2A0A1W2PRP0 233 aa10.99□□□□□ -0.65
CCHCR1-211ENST00000467553 LINC00473A8K010 186 aa10.99□□□□□ -0.65
CCHCR1-211ENST00000467553 SHOXO15266 292 aa10.99□□□□□ -0.65
CCHCR1-211ENST00000467553 SLC25A17O43808 307 aa10.99□□□□□ -0.65
CCHCR1-211ENST00000467553 SLC22A5O76082 557 aa10.99□□□□□ -0.65
CCHCR1-211ENST00000467553 ELANEP08246 267 aa10.99□□□□□ -0.65
CCHCR1-211ENST00000467553 OR5H8P0DN80 308 aa10.99□□□□□ -0.65
CCHCR1-211ENST00000467553 RRASP10301 218 aa10.99□□□□□ -0.65
CCHCR1-211ENST00000467553 FCGR2CP31995 323 aa10.99□□□□□ -0.65
CCHCR1-211ENST00000467553 PRSS3P35030 304 aa10.99□□□□□ -0.65
CCHCR1-211ENST00000467553 LGALS7P47929 136 aa10.99□□□□□ -0.65
CCHCR1-211ENST00000467553 CX3CL1P78423 397 aa10.99□□□□□ -0.65
CCHCR1-211ENST00000467553 RTL8BQ17RB0 113 aa10.99□□□□□ -0.65
CCHCR1-211ENST00000467553 CLVS1Q8IUQ0 354 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms