RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 PACRGLQ8N7B6 248 aa0.76□□□□□ -2.29
SMC4-207ENST00000467263 RNASEH2CQ8TDP1 164 aaKnown RBP0.76□□□□□ -2.29
SMC4-207ENST00000467263 PPWD1Q96BP3 646 aaKnown RBP0.76□□□□□ -2.29
SMC4-207ENST00000467263 EIF5A2Q9GZV4 153 aaKnown RBP0.76□□□□□ -2.29
SMC4-207ENST00000467263 UBQLN4Q9NRR5 601 aa0.76□□□□□ -2.29
SMC4-207ENST00000467263 NRBP2Q9NSY0 501 aa0.76□□□□□ -2.29
SMC4-207ENST00000467263 TAAR3PQ9P1P4 343 aa0.76□□□□□ -2.29
SMC4-207ENST00000467263 F5H5K5 113 aa0.75□□□□□ -2.29
SMC4-207ENST00000467263 PRB4P10163 310 aaPredicted RBP0.75□□□□□ -2.29
SMC4-207ENST00000467263 AKR1C3P42330 323 aa0.75□□□□□ -2.29
SMC4-207ENST00000467263 DLX6P56179 175 aa0.75□□□□□ -2.29
SMC4-207ENST00000467263 CTAG1AP78358 180 aa0.75□□□□□ -2.29
SMC4-207ENST00000467263 GNA12Q03113 381 aa0.75□□□□□ -2.29
SMC4-207ENST00000467263 LGALS9BQ3B8N2 356 aa0.75□□□□□ -2.29
SMC4-207ENST00000467263 FP248Q71RG6 208 aaPredicted RBP0.75□□□□□ -2.29
SMC4-207ENST00000467263 SIKE1Q9BRV8 207 aa0.75□□□□□ -2.29
SMC4-207ENST00000467263 TTTY13Q9BZ97 58 aa0.75□□□□□ -2.29
SMC4-207ENST00000467263 POLEQ07864 2286 aa0.75□□□□□ -2.29
SMC4-207ENST00000467263 NPYP01303 97 aa0.74□□□□□ -2.29
SMC4-207ENST00000467263 IFNGR2P38484 337 aa0.74□□□□□ -2.29
SMC4-207ENST00000467263 RBM11P57052 281 aaKnown RBP0.74□□□□□ -2.29
SMC4-207ENST00000467263 DAD1P61803 113 aa0.74□□□□□ -2.29
SMC4-207ENST00000467263 HOXC5Q00444 222 aa0.74□□□□□ -2.29
SMC4-207ENST00000467263 TMEM267Q0VDI3 215 aaPredicted RBP0.74□□□□□ -2.29
SMC4-207ENST00000467263 EXOC3L4Q17RC7 722 aa0.74□□□□□ -2.29
SMC4-207ENST00000467263 KTN1-AS1Q86SY8 53 aa0.74□□□□□ -2.29
SMC4-207ENST00000467263 NAA40Q86UY6 237 aa0.74□□□□□ -2.29
SMC4-207ENST00000467263 SLC13A5Q86YT5 568 aaPredicted RBP0.74□□□□□ -2.29
SMC4-207ENST00000467263 C1orf174Q8IYL3 243 aa0.74□□□□□ -2.29
SMC4-207ENST00000467263 LRRC34Q8IZ02 419 aa0.74□□□□□ -2.29
SMC4-207ENST00000467263 DYNC2LI1Q8TCX1 351 aa0.74□□□□□ -2.29
SMC4-207ENST00000467263 SMIM12Q96EX1 92 aa0.74□□□□□ -2.29
SMC4-207ENST00000467263 OR7D2Q96RA2 312 aa0.74□□□□□ -2.29
SMC4-207ENST00000467263 TMEM208Q9BTX3 173 aa0.74□□□□□ -2.29
SMC4-207ENST00000467263 CST9LQ9H4G1 147 aa0.74□□□□□ -2.29
SMC4-207ENST00000467263 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.74□□□□□ -2.29
SMC4-207ENST00000467263 HEATR5BQ9P2D3 2071 aa0.74□□□□□ -2.29
SMC4-207ENST00000467263 GRIN2BQ13224 1484 aa0.73□□□□□ -2.29
SMC4-207ENST00000467263 CPAMD8Q8IZJ3 1885 aa0.73□□□□□ -2.29
SMC4-207ENST00000467263 NAV1Q8NEY1 1877 aa0.73□□□□□ -2.29
SMC4-207ENST00000467263 NPATQ14207 1427 aa0.73□□□□□ -2.29
SMC4-207ENST00000467263 NDUFB2O95178 105 aa0.73□□□□□ -2.29
SMC4-207ENST00000467263 APOA1P02647 267 aa0.73□□□□□ -2.29
SMC4-207ENST00000467263 PVALBP20472 110 aaPredicted RBP0.73□□□□□ -2.29
SMC4-207ENST00000467263 SYT1P21579 422 aa0.73□□□□□ -2.29
SMC4-207ENST00000467263 GABRA2P47869 451 aa0.73□□□□□ -2.29
SMC4-207ENST00000467263 PLCXD2Q0VAA5 305 aa0.73□□□□□ -2.29
SMC4-207ENST00000467263 CDK5R1Q15078 307 aa0.73□□□□□ -2.29
SMC4-207ENST00000467263 BAP18Q8IXM2 172 aa0.73□□□□□ -2.29
SMC4-207ENST00000467263 RNASE6Q93091 150 aaKnown RBP0.73□□□□□ -2.29
SMC4-207ENST00000467263 SFRP2Q96HF1 295 aa0.73□□□□□ -2.29
SMC4-207ENST00000467263 CYTH2Q99418 400 aa0.73□□□□□ -2.29
SMC4-207ENST00000467263 DOHHQ9BU89 302 aa0.73□□□□□ -2.29
SMC4-207ENST00000467263 AGPAT3Q9NRZ7 376 aa0.73□□□□□ -2.29
SMC4-207ENST00000467263 KLK5Q9Y337 293 aaPredicted RBP0.73□□□□□ -2.29
SMC4-207ENST00000467263 BRWD1Q9NSI6 2320 aa0.73□□□□□ -2.29
SMC4-207ENST00000467263 TECTAO75443 2155 aa0.73□□□□□ -2.29
SMC4-207ENST00000467263 ARFGEF3Q5TH69 2177 aa0.73□□□□□ -2.29
SMC4-207ENST00000467263 GOLGA8QA0A0J9YX86 632 aa0.72□□□□□ -2.29
SMC4-207ENST00000467263 F8W036 122 aa0.72□□□□□ -2.29
SMC4-207ENST00000467263 M0R381 172 aa0.72□□□□□ -2.29
SMC4-207ENST00000467263 COPEO14579 308 aa0.72□□□□□ -2.29
SMC4-207ENST00000467263 KLRC4O43908 158 aa0.72□□□□□ -2.29
SMC4-207ENST00000467263 CIAO1O76071 339 aa0.72□□□□□ -2.29
SMC4-207ENST00000467263 IL9P15248 144 aa0.72□□□□□ -2.29
SMC4-207ENST00000467263 CRATP43155 626 aa0.72□□□□□ -2.29
SMC4-207ENST00000467263 RPL27AP46776 148 aaKnown RBP0.72□□□□□ -2.29
SMC4-207ENST00000467263 KCNJ3P48549 501 aa0.72□□□□□ -2.29
SMC4-207ENST00000467263 SURF2Q15527 256 aaPredicted RBP0.72□□□□□ -2.29
SMC4-207ENST00000467263 FBXO48Q5FWF7 155 aa0.72□□□□□ -2.29
SMC4-207ENST00000467263 RBM48Q5RL73 367 aaKnown RBP0.72□□□□□ -2.29
SMC4-207ENST00000467263 LCN8Q6JVE9 175 aa0.72□□□□□ -2.29
SMC4-207ENST00000467263 C15orf53Q8NAA6 179 aa0.72□□□□□ -2.29
SMC4-207ENST00000467263 OR1L8Q8NGR8 309 aa0.72□□□□□ -2.29
SMC4-207ENST00000467263 TLCD1Q96CP7 247 aa0.72□□□□□ -2.29
SMC4-207ENST00000467263 NMNAT3Q96T66 252 aa0.72□□□□□ -2.29
SMC4-207ENST00000467263 ASCL3Q9NQ33 180 aa0.72□□□□□ -2.29
SMC4-207ENST00000467263 POLR3HQ9Y535 204 aaPredicted RBP0.72□□□□□ -2.29
SMC4-207ENST00000467263 MEIKINA0A087WXM9 373 aa0.71□□□□□ -2.3
SMC4-207ENST00000467263 LOC100506127A0A0U1RQW1 187 aa0.71□□□□□ -2.3
SMC4-207ENST00000467263 SYNGR1O43759 233 aa0.71□□□□□ -2.3
SMC4-207ENST00000467263 MRPS14O60783 128 aaKnown RBP0.71□□□□□ -2.3
SMC4-207ENST00000467263 BRI3O95415 125 aa0.71□□□□□ -2.3
SMC4-207ENST00000467263 IVLP07476 585 aa0.71□□□□□ -2.3
SMC4-207ENST00000467263 CCR7P32248 378 aa0.71□□□□□ -2.3
SMC4-207ENST00000467263 AQP4P55087 323 aa0.71□□□□□ -2.3
SMC4-207ENST00000467263 Q3ZCU0 254 aa0.71□□□□□ -2.3
SMC4-207ENST00000467263 ZNF705AQ6ZN79 300 aaPredicted RBP0.71□□□□□ -2.3
SMC4-207ENST00000467263 SLC36A1Q7Z2H8 476 aa0.71□□□□□ -2.3
SMC4-207ENST00000467263 OR13C8Q8NGS7 320 aa0.71□□□□□ -2.3
SMC4-207ENST00000467263 CPNE2Q96FN4 548 aaPredicted RBP0.71□□□□□ -2.3
SMC4-207ENST00000467263 ADAT1Q9BUB4 502 aaKnown RBP0.71□□□□□ -2.3
SMC4-207ENST00000467263 NUP153P49790 1475 aaKnown RBP0.71□□□□□ -2.3
SMC4-207ENST00000467263 TRAV8-1A0A0A6YYK1 113 aa0.7□□□□□ -2.3
SMC4-207ENST00000467263 HMSDA8MTL9 139 aa0.7□□□□□ -2.3
SMC4-207ENST00000467263 PLA2G10O15496 165 aa0.7□□□□□ -2.3
SMC4-207ENST00000467263 ADAP1O75689 374 aa0.7□□□□□ -2.3
SMC4-207ENST00000467263 S100A9P06702 114 aaKnown RBP0.7□□□□□ -2.3
SMC4-207ENST00000467263 DEFA4P12838 97 aa0.7□□□□□ -2.3
SMC4-207ENST00000467263 CFL1P23528 166 aaKnown RBP0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms