RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 GNG10P50151 68 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 ARHGDIBP52566 201 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 RPL23AP62750 156 aaKnown RBP11.19□□□□□ -0.62
UBE4B-206ENST00000466379 SWI5Q1ZZU3 235 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 FBXL19-AS1Q494R0 122 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 CT45A1Q5HYN5 189 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 PRAMEF5Q5TYX0 476 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 LYPD2Q6UXB3 125 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 CT45A3Q8NHU0 189 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 PRORYQ9H606 182 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 GFOD1Q9NXC2 390 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 PSENENQ9NZ42 101 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 CISD1Q9NZ45 108 aaKnown RBP11.19□□□□□ -0.62
UBE4B-206ENST00000466379 PPIAL4AQ9Y536 164 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 YLPM1P49750 1951 aaKnown RBP11.19□□□□□ -0.62
UBE4B-206ENST00000466379 TRAV38-1A0A0B4J264 116 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 TXNL1O43396 289 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 ZNF273Q14593 569 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 TMEM182Q6ZP80 229 aaPredicted RBP11.19□□□□□ -0.62
UBE4B-206ENST00000466379 CA5BP1Q8WTZ4 195 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 SAT2Q96F10 170 aaPredicted RBP11.19□□□□□ -0.62
UBE4B-206ENST00000466379 RAB40CQ96S21 281 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 ABHD14AQ9BUJ0 271 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 RBKSQ9H477 322 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 MMP26Q9NRE1 261 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 C19orf12Q9NSK7 152 aa11.19□□□□□ -0.62
UBE4B-206ENST00000466379 SLC25A10Q9UBX3 287 aaPredicted RBP11.19□□□□□ -0.62
UBE4B-206ENST00000466379 SEC11BP0C7V7 166 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 METTL15P1P0C7V9 234 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 ATP6V0CP27449 155 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 MIDNQ504T8 468 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 SPINK9Q5DT21 86 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 C17orf50Q8WW18 174 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 NCOR1P1Q9H4R4 102 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 IDI2-AS1Q9NZ38 188 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 ZNRD1Q9P1U0 126 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 ARFGEF3Q5TH69 2177 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 TOR1AO14656 332 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 CRYZL1O95825 349 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 RUNX1Q01196 453 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 BAXQ07812 192 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 ARL16Q0P5N6 197 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 SSX9Q7RTT3 188 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 H2BFWTQ7Z2G1 175 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 STX12Q86Y82 276 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 C1orf87Q8N0U7 546 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 FAM212BQ9NTI7 297 aaPredicted RBP11.18□□□□□ -0.62
UBE4B-206ENST00000466379 FAM96BQ9Y3D0 163 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 WSB1Q9Y6I7 421 aa11.18□□□□□ -0.62
UBE4B-206ENST00000466379 RAB19A4D1S5 217 aa11.17□□□□□ -0.62
UBE4B-206ENST00000466379 LYNX1G3V0Z9 82 aa11.17□□□□□ -0.62
UBE4B-206ENST00000466379 LYNX1P0DP58 116 aa11.17□□□□□ -0.62
UBE4B-206ENST00000466379 SULT1A1P50225 295 aa11.17□□□□□ -0.62
UBE4B-206ENST00000466379 UBE2KP61086 200 aa11.17□□□□□ -0.62
UBE4B-206ENST00000466379 TNFRSF9Q07011 255 aa11.17□□□□□ -0.62
UBE4B-206ENST00000466379 ZNF616Q08AN1 781 aa11.17□□□□□ -0.62
UBE4B-206ENST00000466379 PJVKQ0ZLH3 352 aa11.17□□□□□ -0.62
UBE4B-206ENST00000466379 ZNF266Q14584 549 aa11.17□□□□□ -0.62
UBE4B-206ENST00000466379 SPANXN5Q5MJ07 72 aa11.17□□□□□ -0.62
UBE4B-206ENST00000466379 BTNL8Q6UX41 500 aa11.17□□□□□ -0.62
UBE4B-206ENST00000466379 VKORC1L1Q8N0U8 176 aa11.17□□□□□ -0.62
UBE4B-206ENST00000466379 R3HDM4Q96D70 268 aa11.17□□□□□ -0.62
UBE4B-206ENST00000466379 MS4A5Q9H3V2 200 aa11.17□□□□□ -0.62
UBE4B-206ENST00000466379 ITPR1Q14643 2758 aa11.17□□□□□ -0.62
UBE4B-206ENST00000466379 SAA2-SAA4A0A096LPE2 208 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 ZNF729A6NN14 1252 aaPredicted RBP11.16□□□□□ -0.62
UBE4B-206ENST00000466379 MARCH11A6NNE9 402 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 RBMXL2O75526 392 aaKnown RBP11.16□□□□□ -0.62
UBE4B-206ENST00000466379 APOC3P02656 99 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 PRH1P02810 166 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 DANCRP0C864 163 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 SAA2P0DJI9 122 aaPredicted RBP11.16□□□□□ -0.62
UBE4B-206ENST00000466379 CCL3L1P16619 93 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 BLOC1S1P78537 153 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 EFNB3Q15768 340 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 HAPLN4Q86UW8 402 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 LYG1Q8N1E2 194 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.16□□□□□ -0.62
UBE4B-206ENST00000466379 H1FXQ92522 213 aaKnown RBP11.16□□□□□ -0.62
UBE4B-206ENST00000466379 ZDHHC16Q969W1 377 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 PARP11Q9NR21 331 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 COA4Q9NYJ1 87 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 CTSZQ9UBR2 303 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 CACFD1Q9UGQ2 172 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 A0A1B0GV50 99 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 B9A039 149 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 RAB29O14966 203 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 OR9G9P0C7N8 305 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 CAMLGP49069 296 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 OR2B8PP59922 312 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 RPS16P62249 146 aaKnown RBP11.16□□□□□ -0.62
UBE4B-206ENST00000466379 ZNF439Q8NDP4 499 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 OR2G3Q8NGZ4 309 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 ATP5SQ99766 215 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.16□□□□□ -0.62
UBE4B-206ENST00000466379 HSPB7Q9UBY9 170 aa11.16□□□□□ -0.62
UBE4B-206ENST00000466379 IGHV1-69-2A0A0G2JMI3 117 aa11.15□□□□□ -0.62
UBE4B-206ENST00000466379 hADV38S2A0JD32 116 aa11.15□□□□□ -0.62
UBE4B-206ENST00000466379 RPL31P62899 125 aaKnown RBP11.15□□□□□ -0.62
UBE4B-206ENST00000466379 UQCC3Q6UW78 93 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms