RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 CRYBA1P05813 215 aa15.42■□□□□ 0.06
CAPN3-209ENST00000466222 PPT1P50897 306 aa15.42■□□□□ 0.06
CAPN3-209ENST00000466222 NHLH2Q02577 135 aa15.42■□□□□ 0.06
CAPN3-209ENST00000466222 BAXQ07812 192 aa15.42■□□□□ 0.06
CAPN3-209ENST00000466222 RNF212Q495C1 297 aa15.42■□□□□ 0.06
CAPN3-209ENST00000466222 ZNF788Q6ZQV5 615 aa15.42■□□□□ 0.06
CAPN3-209ENST00000466222 CMTM1Q8IZ96 169 aa15.42■□□□□ 0.06
CAPN3-209ENST00000466222 LYRM2Q9NU23 88 aaPredicted RBP15.42■□□□□ 0.06
CAPN3-209ENST00000466222 USF3Q68DE3 2245 aa15.42■□□□□ 0.06
CAPN3-209ENST00000466222 SVEP1Q4LDE5 3571 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 TRAV38-1A0A0B4J264 116 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 BTBD17A6NE02 478 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 K7N7A8 449 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 OVOL3O00110 214 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 HSPA12AO43301 675 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 WNT2P09544 360 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 VDAC1P21796 283 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 RAB5BP61020 215 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 VAMP2P63027 116 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 CLEC9AQ6UXN8 241 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 PRR18Q8N4B5 295 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 OR5D13Q8NGL4 314 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 IGFBPL1Q8WX77 278 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 SDSLQ96GA7 329 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 H0Y980 276 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 TNFRSF13BO14836 293 aaPredicted RBP15.41■□□□□ 0.06
CAPN3-209ENST00000466222 KRTAP10-9P60411 292 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 KRBOX4Q5JUW0 171 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 GAPTQ8N292 157 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 NEU4Q8WWR8 484 aaPredicted RBP15.41■□□□□ 0.06
CAPN3-209ENST00000466222 PSMG3-AS1Q96PY0 264 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 TRAPPC2LQ9UL33 140 aa15.41■□□□□ 0.06
CAPN3-209ENST00000466222 MAP1AP78559 2803 aaPredicted RBP15.4■□□□□ 0.06
CAPN3-209ENST00000466222 IGKV1-6A0A0C4DH72 117 aa15.4■□□□□ 0.06
CAPN3-209ENST00000466222 GOSR1O95249 250 aa15.4■□□□□ 0.06
CAPN3-209ENST00000466222 HERPUD1Q15011 391 aa15.4■□□□□ 0.06
CAPN3-209ENST00000466222 NMSQ5H8A3 153 aa15.4■□□□□ 0.06
CAPN3-209ENST00000466222 SHEQ5VZ18 495 aa15.4■□□□□ 0.06
CAPN3-209ENST00000466222 ZNF818PQ6ZRF7 136 aa15.4■□□□□ 0.06
CAPN3-209ENST00000466222 HSD17B11Q8NBQ5 300 aa15.4■□□□□ 0.06
CAPN3-209ENST00000466222 SNX22Q96L94 193 aa15.4■□□□□ 0.06
CAPN3-209ENST00000466222 EIF5A2Q9GZV4 153 aaKnown RBP15.4■□□□□ 0.06
CAPN3-209ENST00000466222 CTSZQ9UBR2 303 aa15.4■□□□□ 0.06
CAPN3-209ENST00000466222 SLC25A6P12236 298 aa15.39■□□□□ 0.05
CAPN3-209ENST00000466222 EDDM3BP56851 147 aa15.39■□□□□ 0.05
CAPN3-209ENST00000466222 RHEBQ15382 184 aa15.39■□□□□ 0.05
CAPN3-209ENST00000466222 FAM53AQ6NSI3 398 aaPredicted RBP15.39■□□□□ 0.05
CAPN3-209ENST00000466222 ZNF880Q6PDB4 577 aa15.39■□□□□ 0.05
CAPN3-209ENST00000466222 ZNF561Q8N587 486 aa15.39■□□□□ 0.05
CAPN3-209ENST00000466222 MRGPRDQ8TDS7 321 aa15.39■□□□□ 0.05
CAPN3-209ENST00000466222 GNPNAT1Q96EK6 184 aaPredicted RBP15.39■□□□□ 0.05
CAPN3-209ENST00000466222 CCL19Q99731 98 aa15.39■□□□□ 0.05
CAPN3-209ENST00000466222 SLC35B3Q9H1N7 401 aa15.39■□□□□ 0.05
CAPN3-209ENST00000466222 ZNF665Q9H7R5 613 aa15.39■□□□□ 0.05
CAPN3-209ENST00000466222 IGSF23A1L1A6 192 aa15.39■□□□□ 0.05
CAPN3-209ENST00000466222 FAM24AA6NFZ4 105 aa15.39■□□□□ 0.05
CAPN3-209ENST00000466222 MDH2P40926 338 aaKnown RBP15.39■□□□□ 0.05
CAPN3-209ENST00000466222 ID3Q02535 119 aa15.39■□□□□ 0.05
CAPN3-209ENST00000466222 TMEM252Q8N6L7 170 aa15.39■□□□□ 0.05
CAPN3-209ENST00000466222 OR13A1Q8NGR1 328 aa15.39■□□□□ 0.05
CAPN3-209ENST00000466222 SH3BGRL3Q9H299 93 aa15.39■□□□□ 0.05
CAPN3-209ENST00000466222 RPS10P5Q9NQ39 176 aa15.39■□□□□ 0.05
CAPN3-209ENST00000466222 SPG11Q96JI7 2443 aa15.38■□□□□ 0.05
CAPN3-209ENST00000466222 TMEM30CPA0ZSE6 113 aa15.38■□□□□ 0.05
CAPN3-209ENST00000466222 PPIHO43447 177 aaKnown RBP15.38■□□□□ 0.05
CAPN3-209ENST00000466222 ADAM20O43506 726 aa15.38■□□□□ 0.05
CAPN3-209ENST00000466222 MT-ND4LP03901 98 aa15.38■□□□□ 0.05
CAPN3-209ENST00000466222 AWAT1Q58HT5 328 aa15.38■□□□□ 0.05
CAPN3-209ENST00000466222 SLC35E4Q6ICL7 350 aa15.38■□□□□ 0.05
CAPN3-209ENST00000466222 TMEM182Q6ZP80 229 aaPredicted RBP15.38■□□□□ 0.05
CAPN3-209ENST00000466222 ZNF525Q8N782 197 aa15.38■□□□□ 0.05
CAPN3-209ENST00000466222 CABLES2Q9BTV7 478 aa15.38■□□□□ 0.05
CAPN3-209ENST00000466222 PARP12Q9H0J9 701 aaKnown RBP15.38■□□□□ 0.05
CAPN3-209ENST00000466222 UNKLQ9H9P5 680 aaKnown RBP15.38■□□□□ 0.05
CAPN3-209ENST00000466222 SEBOXQ9HB31 216 aaPredicted RBP15.38■□□□□ 0.05
CAPN3-209ENST00000466222 DYSFO75923 2080 aa15.38■□□□□ 0.05
CAPN3-209ENST00000466222 C1orf196B1AJZ1 125 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 IGHV2-70P01814 119 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 EFNA4P52798 201 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 POLR2GP62487 172 aaKnown RBP eCLIP15.37■□□□□ 0.05
CAPN3-209ENST00000466222 DPPA3Q6W0C5 159 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 FAM213BQ8TBF2 198 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 IL1F10Q8WWZ1 152 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 C14orf79Q96F83 325 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 MBNL3Q9NUK0 354 aaKnown RBP15.37■□□□□ 0.05
CAPN3-209ENST00000466222 POLQO75417 2590 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 C7orf77A4D0Y5 90 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 NPIPB11E5RHQ5 1161 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 MGST3O14880 152 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 SSSCA1O60232 199 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 IGHV4-39P01824 125 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 ATP6V0CP27449 155 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 SSTR5P35346 364 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 HLA-DRB3P79483 266 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 OR2G3Q8NGZ4 309 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 RFESDQ8TAC1 157 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 HIPK2Q9H2X6 1198 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 CCL28Q9NRJ3 127 aa15.37■□□□□ 0.05
CAPN3-209ENST00000466222 IGKV1D-13A0A0B4J2D9 117 aa15.36■□□□□ 0.05
CAPN3-209ENST00000466222 ZNF98A6NK75 572 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms