RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 PRUNE2Q8WUY3 3088 aa16.6■□□□□ 0.25
SDF4-205ENST00000465727 MRPL33O75394 65 aaKnown RBP16.6■□□□□ 0.25
SDF4-205ENST00000465727 IL6RP08887 468 aaPredicted RBP16.6■□□□□ 0.25
SDF4-205ENST00000465727 MRPS11P82912 194 aaKnown RBP16.6■□□□□ 0.25
SDF4-205ENST00000465727 ARF1P84077 181 aaKnown RBP16.6■□□□□ 0.25
SDF4-205ENST00000465727 ARSJQ5FYB0 599 aaPredicted RBP16.6■□□□□ 0.25
SDF4-205ENST00000465727 OR5AU1Q8NGC0 362 aa16.6■□□□□ 0.25
SDF4-205ENST00000465727 ABHD3Q8WU67 409 aa16.6■□□□□ 0.25
SDF4-205ENST00000465727 OR2J1Q9GZK6 312 aa16.6■□□□□ 0.25
SDF4-205ENST00000465727 WIPI2Q9Y4P8 454 aa16.6■□□□□ 0.25
SDF4-205ENST00000465727 A6NNC1 897 aa16.59■□□□□ 0.25
SDF4-205ENST00000465727 J3QT63 122 aa16.59■□□□□ 0.25
SDF4-205ENST00000465727 GALR2O43603 387 aaPredicted RBP16.59■□□□□ 0.25
SDF4-205ENST00000465727 CRISP2P16562 243 aa16.59■□□□□ 0.25
SDF4-205ENST00000465727 IGFBP4P22692 258 aa16.59■□□□□ 0.25
SDF4-205ENST00000465727 ATP5G3P48201 142 aa16.59■□□□□ 0.25
SDF4-205ENST00000465727 CATR1Q13166 79 aa16.59■□□□□ 0.25
SDF4-205ENST00000465727 COL5A1-AS1Q5SY13 56 aa16.59■□□□□ 0.25
SDF4-205ENST00000465727 GUSBP11Q6P575 273 aa16.59■□□□□ 0.25
SDF4-205ENST00000465727 TCTEX1D1Q8N7M0 179 aa16.59■□□□□ 0.25
SDF4-205ENST00000465727 TP53TG3Q9ULZ0 132 aa16.59■□□□□ 0.25
SDF4-205ENST00000465727 IGKV3D-15A0A087WSY6 115 aa16.58■□□□□ 0.25
SDF4-205ENST00000465727 LNP1A1A4G5 178 aa16.58■□□□□ 0.25
SDF4-205ENST00000465727 RBFOX2O43251 390 aaKnown RBP eCLIP16.58■□□□□ 0.252e-6■■□□□ 13.5
SDF4-205ENST00000465727 CRYAAP02489 173 aa16.58■□□□□ 0.25
SDF4-205ENST00000465727 TIMP3P35625 211 aa16.58■□□□□ 0.25
SDF4-205ENST00000465727 PLA2G5P39877 138 aa16.58■□□□□ 0.25
SDF4-205ENST00000465727 LHX2P50458 406 aa16.58■□□□□ 0.25
SDF4-205ENST00000465727 SLC23A3Q6PIS1 610 aa16.58■□□□□ 0.25
SDF4-205ENST00000465727 Q8IYB0 196 aa16.58■□□□□ 0.25
SDF4-205ENST00000465727 AGBL5Q8NDL9 886 aa16.58■□□□□ 0.25
SDF4-205ENST00000465727 YLPM1P49750 1951 aaKnown RBP16.58■□□□□ 0.24
SDF4-205ENST00000465727 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.58■□□□□ 0.24
SDF4-205ENST00000465727 ZG16O60844 167 aa16.58■□□□□ 0.24
SDF4-205ENST00000465727 G6PCP35575 357 aa16.58■□□□□ 0.24
SDF4-205ENST00000465727 TCF23Q7RTU1 214 aa16.58■□□□□ 0.24
SDF4-205ENST00000465727 OR4B1Q8NGF8 309 aa16.58■□□□□ 0.24
SDF4-205ENST00000465727 OR10G8Q8NGN5 311 aa16.58■□□□□ 0.24
SDF4-205ENST00000465727 HSPB9Q9BQS6 159 aa16.58■□□□□ 0.24
SDF4-205ENST00000465727 DERL1Q9BUN8 251 aa16.58■□□□□ 0.24
SDF4-205ENST00000465727 DUSP23Q9BVJ7 150 aa16.58■□□□□ 0.24
SDF4-205ENST00000465727 PATZ1Q9HBE1 687 aaKnown RBP16.58■□□□□ 0.24
SDF4-205ENST00000465727 WDR83OSQ9Y284 106 aa16.58■□□□□ 0.24
SDF4-205ENST00000465727 ARHGAP21Q5T5U3 1957 aa16.58■□□□□ 0.24
SDF4-205ENST00000465727 SPEGQ15772 3267 aa16.58■□□□□ 0.24
SDF4-205ENST00000465727 NCKAP5O14513 1909 aa16.57■□□□□ 0.24
SDF4-205ENST00000465727 A0A1W2PPV4 95 aa16.57■□□□□ 0.24
SDF4-205ENST00000465727 GRIFINA4D1Z8 144 aa16.57■□□□□ 0.24
SDF4-205ENST00000465727 RAB29O14966 203 aa16.57■□□□□ 0.24
SDF4-205ENST00000465727 MPDU1O75352 247 aa16.57■□□□□ 0.24
SDF4-205ENST00000465727 CCL2P13500 99 aa16.57■□□□□ 0.24
SDF4-205ENST00000465727 Q0VG73 95 aa16.57■□□□□ 0.24
SDF4-205ENST00000465727 SDK2Q58EX2 2172 aa16.57■□□□□ 0.24
SDF4-205ENST00000465727 SPTBN5Q9NRC6 3674 aaKnown RBP16.57■□□□□ 0.24
SDF4-205ENST00000465727 CLDN14O95500 239 aa16.57■□□□□ 0.24
SDF4-205ENST00000465727 IGHV3-9P01782 118 aa16.57■□□□□ 0.24
SDF4-205ENST00000465727 LINC00310P59036 64 aa16.57■□□□□ 0.24
SDF4-205ENST00000465727 IL11RAQ14626 422 aa16.57■□□□□ 0.24
SDF4-205ENST00000465727 TRIP6Q15654 476 aaKnown RBP16.57■□□□□ 0.24
SDF4-205ENST00000465727 Q8N7P7 452 aa16.57■□□□□ 0.24
SDF4-205ENST00000465727 ZNF114Q8NC26 417 aa16.57■□□□□ 0.24
SDF4-205ENST00000465727 PRRG4Q9BZD6 226 aa16.57■□□□□ 0.24
SDF4-205ENST00000465727 AURKAIP1Q9NWT8 199 aaPredicted RBP16.57■□□□□ 0.24
SDF4-205ENST00000465727 PAM16Q9Y3D7 125 aa16.57■□□□□ 0.24
SDF4-205ENST00000465727 DOCK11Q5JSL3 2073 aa16.56■□□□□ 0.24
SDF4-205ENST00000465727 TRBV9A0A0B4J1U6 114 aa16.56■□□□□ 0.24
SDF4-205ENST00000465727 A0A1W2PR80 420 aa16.56■□□□□ 0.24
SDF4-205ENST00000465727 RAMP3O60896 148 aa16.56■□□□□ 0.24
SDF4-205ENST00000465727 SERF1AO75920 110 aa16.56■□□□□ 0.24
SDF4-205ENST00000465727 RAC2P15153 192 aa16.56■□□□□ 0.24
SDF4-205ENST00000465727 EGR1P18146 543 aa16.56■□□□□ 0.24
SDF4-205ENST00000465727 CD82P27701 267 aa16.56■□□□□ 0.24
SDF4-205ENST00000465727 ARR3P36575 388 aa16.56■□□□□ 0.24
SDF4-205ENST00000465727 UBE2G2P60604 165 aa16.56■□□□□ 0.24
SDF4-205ENST00000465727 POM121L2Q96KW2 1035 aa16.56■□□□□ 0.24
SDF4-205ENST00000465727 MRPL18Q9H0U6 180 aaKnown RBP16.56■□□□□ 0.24
SDF4-205ENST00000465727 IL36BQ9NZH7 164 aa16.56■□□□□ 0.24
SDF4-205ENST00000465727 ZFP30Q9Y2G7 519 aa16.56■□□□□ 0.24
SDF4-205ENST00000465727 BRWD1Q9NSI6 2320 aa16.56■□□□□ 0.24
SDF4-205ENST00000465727 TRBV20OR9-2A0A075B6H5 130 aa16.55■□□□□ 0.24
SDF4-205ENST00000465727 TRAV39A0A0B4J263 110 aa16.55■□□□□ 0.24
SDF4-205ENST00000465727 A0A0G2JMM0 328 aa16.55■□□□□ 0.24
SDF4-205ENST00000465727 A0A1W2PPB8 328 aa16.55■□□□□ 0.24
SDF4-205ENST00000465727 A0A1W2PRS3 328 aa16.55■□□□□ 0.24
SDF4-205ENST00000465727 KIR3DP1A8MWS1 328 aa16.55■□□□□ 0.24
SDF4-205ENST00000465727 OR2H2O95918 312 aa16.55■□□□□ 0.24
SDF4-205ENST00000465727 NGFP01138 241 aa16.55■□□□□ 0.24
SDF4-205ENST00000465727 SRFP11831 508 aa16.55■□□□□ 0.24
SDF4-205ENST00000465727 ZNF90Q03938 601 aa16.55■□□□□ 0.24
SDF4-205ENST00000465727 EIF4EBP1Q13541 118 aaPredicted RBP16.55■□□□□ 0.24
SDF4-205ENST00000465727 TDRG1Q3Y452 100 aa16.55■□□□□ 0.24
SDF4-205ENST00000465727 QTRT1Q9BXR0 403 aaKnown RBP16.55■□□□□ 0.24
SDF4-205ENST00000465727 OCIAD1Q9NX40 245 aa16.55■□□□□ 0.24
SDF4-205ENST00000465727 A0A096LPE4 126 aa16.55■□□□□ 0.24
SDF4-205ENST00000465727 A0A1W2PPZ6 126 aa16.55■□□□□ 0.24
SDF4-205ENST00000465727 KLF7O75840 302 aaPredicted RBP16.55■□□□□ 0.24
SDF4-205ENST00000465727 WIPI1Q5MNZ9 446 aaPredicted RBP16.55■□□□□ 0.24
SDF4-205ENST00000465727 VN1R17PQ8TDU5 208 aa16.55■□□□□ 0.24
SDF4-205ENST00000465727 TMEM204Q9BSN7 226 aa16.55■□□□□ 0.24
SDF4-205ENST00000465727 RHBDL1O75783 438 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms