RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 FGF20Q9NP95 211 aaPredicted RBP0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 SDR39U1Q9NRG7 319 aaPredicted RBP0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 CYTL1Q9NRR1 136 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 PHPT1Q9NRX4 125 aaPredicted RBP0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 SPANXB1Q9NS25 103 aaPredicted RBP0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 C20orf141Q9NUB4 165 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 ACER3Q9NUN7 267 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 TMEM100Q9NV29 134 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 TMEM30AQ9NV96 361 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 RBM22Q9NW64 420 aaKnown RBP eCLIP0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 C21orf62Q9NYP8 219 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 CISD1Q9NZ45 108 aaKnown RBP0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 NUDT4Q9NZJ9 180 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 RNF181Q9P0P0 153 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 ZNF581Q9P0T4 197 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 TAAR3PQ9P1P4 343 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 KLK11Q9UBX7 282 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 TP73-AS1Q9UF72 201 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 TRMT112Q9UI30 125 aaKnown RBP0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 PRSS50Q9UI38 385 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 LSM7Q9UK45 103 aaKnown RBP0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 PRNDQ9UKY0 176 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 RARRES3Q9UL19 164 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 FZR1Q9UM11 496 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 VSIG4Q9Y279 399 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 SIGLEC7Q9Y286 467 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 RCL1Q9Y2P8 373 aaKnown RBP0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 ZNF257Q9Y2Q1 563 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 MRPS17Q9Y2R5 130 aaKnown RBP0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 POLR1DQ9Y2S0 133 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 POLDIP2Q9Y2S7 368 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 ZBTB32Q9Y2Y4 487 aaPredicted RBP0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 KLK5Q9Y337 293 aaPredicted RBP0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 TMED7Q9Y3B3 224 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 RPL36Q9Y3U8 105 aaKnown RBP0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 TIMM8BQ9Y5J9 83 aaPredicted RBP0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 IER3IP1Q9Y5U9 82 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 U3KQE9 123 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 PXDNLA1KZ92 1463 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 NUP153P49790 1475 aaKnown RBP0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 NFAT5O94916 1531 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 DLC1Q96QB1 1528 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 DIP2BQ9P265 1576 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 SETBP1Q9Y6X0 1596 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 SIGLEC1Q9BZZ2 1709 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 SIPA1L3O60292 1781 aaPredicted RBP0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 TSC2P49815 1807 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 TSPOAP1O95153 1857 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 TRPM7Q96QT4 1865 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 KIF26AQ9ULI4 1882 aaPredicted RBP0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 SCN9AQ15858 1988 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 TNRC6AQ8NDV7 1962 aaKnown RBP0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 EVPLQ92817 2033 aa0.77□□□□□ -2.29
RPL39P28-201ENST00000465655 DOCK3Q8IZD9 2030 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 CCDC88CQ9P219 2028 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 ATG2AQ2TAZ0 1938 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 PDCD11Q14690 1871 aaKnown RBP0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 XIRP1Q702N8 1843 aaKnown RBP0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 ZNF236Q9UL36 1845 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 RGPD3A6NKT7 1758 aaPredicted RBP0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 RGPD4Q7Z3J3 1758 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 UBR2Q8IWV8 1755 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 SHANK3Q9BYB0 1731 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 TNKS1BP1Q9C0C2 1729 aaKnown RBP0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 KIAA1210Q9ULL0 1709 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 TOGARAM1Q9Y4F4 1720 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 SCN7AQ01118 1682 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 USP32Q8NFA0 1604 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 MED1Q15648 1581 aaPredicted RBP0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 COL3A1P02461 1466 aaPredicted RBP0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 C1orf167Q5SNV9 1468 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 TECPR2O15040 1411 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 USP6P35125 1406 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 TNS2Q63HR2 1409 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 PLIN4Q96Q06 1357 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 TRBV24-1A0A075B6N3 115 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 A0A087WV48 116 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 TMSB15BA0A087X1C1 80 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 A0A096LPE4 126 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 TMED7-TICAM2A0A0A6YYA0 188 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 NSG1A0A0A6YYJ2 146 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 TRAV8-2A0A0B4J237 113 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 TRAV13-1A0A0B4J241 112 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 TRAV8-4A0A0B4J246 113 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 TRBV4-1A0A0J9YWV2 114 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 LOC102723971A0A1B0GUV8 181 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 A0A1B0GX51 115 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 A0A1W2PPK0 400 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 A0A1W2PPV9 198 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 A0A1W2PPZ6 126 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 A0A1W2PR77 199 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 TCRBV5S4A2TA0A5A2 114 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 hDV102S1A0JD36 115 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 SHISA3A0PJX4 238 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 A1L4Q6 167 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 FAM90A10PA6NDY2 464 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 ARRDC5A6NEK1 342 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 DPRXA6NFQ7 191 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 ZFP92A6NM28 416 aa0.76□□□□□ -2.29
RPL39P28-201ENST00000465655 NEURL1BA8MQ27 555 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms