RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 RAB39BQ96DA2 213 aa15.56■□□□□ 0.08
TSPAN4-210ENST00000464987 RBMXL1Q96E39 390 aaKnown RBP15.56■□□□□ 0.08
TSPAN4-210ENST00000464987 WASF3Q9UPY6 502 aa15.56■□□□□ 0.08
TSPAN4-210ENST00000464987 TANC2Q9HCD6 1990 aa15.56■□□□□ 0.08
TSPAN4-210ENST00000464987 IGKV1D-33P01593 117 aa15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 IGKV1-33P01594 117 aa15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 HBE1P02100 147 aa15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 HSPB1P04792 205 aaKnown RBP15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 NCR3LG1Q68D85 454 aa15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 ZNF787Q6DD87 383 aa15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 IGFL3Q6UXB1 125 aa15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 MOGAT3Q86VF5 341 aa15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 FAM122AQ96E09 287 aa15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 RCC1LQ96I51 464 aaKnown RBP15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 PSMG3Q9BT73 122 aaPredicted RBP15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 LOC102723971A0A1B0GUV8 181 aa15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 SPRY3O43610 288 aa15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 SELLP14151 372 aa15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 Q6ZS92 163 aa15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 ZNF429Q86V71 674 aa15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 RBMXL3Q8N7X1 1067 aaKnown RBP15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 SNIP1Q8TAD8 396 aaKnown RBP15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 TAF15Q92804 592 aaKnown RBP eCLIP15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.55■□□□□ 0.08
TSPAN4-210ENST00000464987 YLPM1P49750 1951 aaKnown RBP15.54■□□□□ 0.08
TSPAN4-210ENST00000464987 PMS2P5A8MQ11 134 aa15.54■□□□□ 0.08
TSPAN4-210ENST00000464987 SNRPEP62304 92 aaKnown RBP15.54■□□□□ 0.08
TSPAN4-210ENST00000464987 MSMO1Q15800 293 aa15.54■□□□□ 0.08
TSPAN4-210ENST00000464987 TIMM23BQ5SRD1 257 aa15.54■□□□□ 0.08
TSPAN4-210ENST00000464987 FAM169BQ8N8A8 192 aa15.54■□□□□ 0.08
TSPAN4-210ENST00000464987 SPTBN2O15020 2390 aa15.54■□□□□ 0.08
TSPAN4-210ENST00000464987 TRAV1-1A0A0B4J248 108 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 SPINT2O43291 252 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 CLDN14O95500 239 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 RAB5AP20339 215 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 RAB5BP61020 215 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 FAM234AQ9H0X4 552 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 PCNX1Q96RV3 2341 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 MARCH11A6NNE9 402 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 C1orf196B1AJZ1 125 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 LINC00587B1AMM8 73 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 RBMXL2O75526 392 aaKnown RBP15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 S100A6P06703 90 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 ZNF134P52741 427 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 RAB2AP61019 212 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 DLK1P80370 383 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 HTD2P86397 168 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 RNF212Q495C1 297 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 KHDC3LQ587J8 217 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 ADAM5Q6NVV9 412 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 DUX4L9Q6RFH8 374 aaPredicted RBP15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 H2BFWTQ7Z2G1 175 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 DTD1Q8TEA8 209 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 ITLN1Q8WWA0 313 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 MEGF10Q96KG7 1140 aa15.53■□□□□ 0.08
TSPAN4-210ENST00000464987 OR2C1O95371 312 aa15.52■□□□□ 0.08
TSPAN4-210ENST00000464987 CRYAAP02489 173 aa15.52■□□□□ 0.08
TSPAN4-210ENST00000464987 OR8U8P0C7N1 319 aa15.52■□□□□ 0.08
TSPAN4-210ENST00000464987 OR9G9P0C7N8 305 aa15.52■□□□□ 0.08
TSPAN4-210ENST00000464987 EDDM3BP56851 147 aa15.52■□□□□ 0.08
TSPAN4-210ENST00000464987 NKX6-1P78426 367 aaPredicted RBP15.52■□□□□ 0.08
TSPAN4-210ENST00000464987 NHLH1Q02575 133 aa15.52■□□□□ 0.08
TSPAN4-210ENST00000464987 FAM27E3Q08E93 113 aa15.52■□□□□ 0.08
TSPAN4-210ENST00000464987 MORN2Q502X0 79 aa15.52■□□□□ 0.08
TSPAN4-210ENST00000464987 MBD3L1Q8WWY6 194 aa15.52■□□□□ 0.08
TSPAN4-210ENST00000464987 YPEL4Q96NS1 127 aa15.52■□□□□ 0.08
TSPAN4-210ENST00000464987 GNG12Q9UBI6 72 aa15.52■□□□□ 0.08
TSPAN4-210ENST00000464987 ANKRD11Q6UB99 2663 aaPredicted RBP15.52■□□□□ 0.08
TSPAN4-210ENST00000464987 ADGRG4Q8IZF6 3080 aa15.52■□□□□ 0.08
TSPAN4-210ENST00000464987 RAB29O14966 203 aa15.52■□□□□ 0.07
TSPAN4-210ENST00000464987 HMGB3O15347 200 aaKnown RBP15.52■□□□□ 0.07
TSPAN4-210ENST00000464987 AGAP20933 346 aa15.52■□□□□ 0.07
TSPAN4-210ENST00000464987 DUTP33316 252 aaKnown RBP15.52■□□□□ 0.07
TSPAN4-210ENST00000464987 TAGLN2P37802 199 aaKnown RBP15.52■□□□□ 0.07
TSPAN4-210ENST00000464987 OR2B8PP59922 312 aa15.52■□□□□ 0.07
TSPAN4-210ENST00000464987 SERF2P84101 59 aa15.52■□□□□ 0.07
TSPAN4-210ENST00000464987 RPL39P5Q59GN2 51 aa15.52■□□□□ 0.07
TSPAN4-210ENST00000464987 C1orf185Q5T7R7 199 aa15.52■□□□□ 0.07
TSPAN4-210ENST00000464987 ACSM6Q6P461 480 aa15.52■□□□□ 0.07
TSPAN4-210ENST00000464987 ZNF66Q6ZN08 573 aa15.52■□□□□ 0.07
TSPAN4-210ENST00000464987 C1orf229Q6ZS94 237 aaPredicted RBP15.52■□□□□ 0.07
TSPAN4-210ENST00000464987 RPP25LQ8N5L8 163 aaKnown RBP15.52■□□□□ 0.07
TSPAN4-210ENST00000464987 GVINP1Q7Z2Y8 2422 aa15.51■□□□□ 0.07
TSPAN4-210ENST00000464987 KLK10O43240 276 aa15.51■□□□□ 0.07
TSPAN4-210ENST00000464987 ADH4P08319 380 aa15.51■□□□□ 0.07
TSPAN4-210ENST00000464987 GLRXP35754 106 aa15.51■□□□□ 0.07
TSPAN4-210ENST00000464987 GPR12P47775 334 aa15.51■□□□□ 0.07
TSPAN4-210ENST00000464987 KLF3P57682 345 aaPredicted RBP15.51■□□□□ 0.07
TSPAN4-210ENST00000464987 RAB11AP62491 216 aa15.51■□□□□ 0.07
TSPAN4-210ENST00000464987 PAX5Q02548 391 aa15.51■□□□□ 0.07
TSPAN4-210ENST00000464987 TLE1Q04724 770 aa15.51■□□□□ 0.07
TSPAN4-210ENST00000464987 TMEM41BQ5BJD5 291 aa15.51■□□□□ 0.07
TSPAN4-210ENST00000464987 FAM90A2PQ658T7 463 aa15.51■□□□□ 0.07
TSPAN4-210ENST00000464987 ZNF343Q6P1L6 599 aa15.51■□□□□ 0.07
TSPAN4-210ENST00000464987 SSX9Q7RTT3 188 aa15.51■□□□□ 0.07
TSPAN4-210ENST00000464987 FAM90A1Q86YD7 464 aa15.51■□□□□ 0.07
TSPAN4-210ENST00000464987 Q8TCH9 128 aa15.51■□□□□ 0.07
TSPAN4-210ENST00000464987 LEAP2Q969E1 77 aa15.51■□□□□ 0.07
TSPAN4-210ENST00000464987 HSD17B10Q99714 261 aaKnown RBP15.51■□□□□ 0.07
TSPAN4-210ENST00000464987 QTRT1Q9BXR0 403 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms