RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 CITED1Q99966 193 aa11.51□□□□□ -0.57
SQSTM1-205ENST00000464493 WNT10AQ9GZT5 417 aa11.51□□□□□ -0.57
SQSTM1-205ENST00000464493 EHFQ9NZC4 300 aa11.51□□□□□ -0.57
SQSTM1-205ENST00000464493 RABL2AQ9UBK7 228 aaPredicted RBP11.51□□□□□ -0.57
SQSTM1-205ENST00000464493 RABL2BQ9UNT1 228 aa11.51□□□□□ -0.57
SQSTM1-205ENST00000464493 NBR2O15453 112 aa11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 RBBP9O75884 186 aa11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 PPYP01298 95 aa11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 IGKV1-16P04430 117 aa11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 TNFSF8P32971 234 aa11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 DUTP33316 252 aaKnown RBP11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 HRH1P35367 487 aa11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 TAGLNQ01995 201 aaKnown RBP11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 IL18Q14116 193 aa11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 RNASE12Q5GAN4 147 aaKnown RBP11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 PYHIN1Q6K0P9 492 aa11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 PDPNQ86YL7 162 aa11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 NPBQ8NG41 125 aa11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 SECTM1Q8WVN6 248 aa11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 FCAMRQ8WWV6 532 aa11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 FLYWCH2Q96CP2 140 aaKnown RBP11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 MMP27Q9H306 513 aa11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 SLC35D1Q9NTN3 355 aa11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 KIAA1456Q9P272 454 aa11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 KLK11Q9UBX7 282 aa11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 RBMX2Q9Y388 322 aaKnown RBP11.5□□□□□ -0.57
SQSTM1-205ENST00000464493 DPPA5A6NC42 116 aa11.49□□□□□ -0.57
SQSTM1-205ENST00000464493 IGHG2P01859 326 aa11.49□□□□□ -0.57
SQSTM1-205ENST00000464493 RRASP10301 218 aa11.49□□□□□ -0.57
SQSTM1-205ENST00000464493 FXYD4P59646 89 aa11.49□□□□□ -0.57
SQSTM1-205ENST00000464493 RPS16P62249 146 aaKnown RBP11.49□□□□□ -0.57
SQSTM1-205ENST00000464493 MRPS10P82664 201 aaKnown RBP11.49□□□□□ -0.57
SQSTM1-205ENST00000464493 ZNF660Q6AZW8 331 aaPredicted RBP11.49□□□□□ -0.57
SQSTM1-205ENST00000464493 SLC35E3Q7Z769 313 aa11.49□□□□□ -0.57
SQSTM1-205ENST00000464493 CENPVQ7Z7K6 275 aaPredicted RBP11.49□□□□□ -0.57
SQSTM1-205ENST00000464493 OR6F1Q8NGZ6 308 aa11.49□□□□□ -0.57
SQSTM1-205ENST00000464493 ZNF2Q9BSG1 426 aaPredicted RBP11.49□□□□□ -0.57
SQSTM1-205ENST00000464493 MTFP1Q9UDX5 166 aa11.49□□□□□ -0.57
SQSTM1-205ENST00000464493 A3GALT2U3KPV4 340 aa11.49□□□□□ -0.57
SQSTM1-205ENST00000464493 LINC01548A6NM66 108 aa11.48□□□□□ -0.57
SQSTM1-205ENST00000464493 LINC00473A8K010 186 aa11.48□□□□□ -0.57
SQSTM1-205ENST00000464493 GABARAPH6UMI1 98 aa11.48□□□□□ -0.57
SQSTM1-205ENST00000464493 NDUFA3O95167 84 aa11.48□□□□□ -0.57
SQSTM1-205ENST00000464493 HERV-K104P61576 105 aa11.48□□□□□ -0.57
SQSTM1-205ENST00000464493 TSPAN5P62079 268 aa11.48□□□□□ -0.57
SQSTM1-205ENST00000464493 CBX3Q13185 183 aa11.48□□□□□ -0.57
SQSTM1-205ENST00000464493 MSMO1Q15800 293 aa11.48□□□□□ -0.57
SQSTM1-205ENST00000464493 RTL8BQ17RB0 113 aa11.48□□□□□ -0.57
SQSTM1-205ENST00000464493 C5orf64Q2M2E5 130 aa11.48□□□□□ -0.57
SQSTM1-205ENST00000464493 FOXRED2Q8IWF2 684 aa11.48□□□□□ -0.57
SQSTM1-205ENST00000464493 BVESQ8NE79 360 aa11.48□□□□□ -0.57
SQSTM1-205ENST00000464493 WIPF2Q8TF74 440 aaPredicted RBP11.48□□□□□ -0.57
SQSTM1-205ENST00000464493 DDB2Q92466 427 aa11.48□□□□□ -0.57
SQSTM1-205ENST00000464493 TSNAXQ99598 290 aaKnown RBP11.48□□□□□ -0.57
SQSTM1-205ENST00000464493 HSD17B10Q99714 261 aaKnown RBP11.48□□□□□ -0.57
SQSTM1-205ENST00000464493 SLC5A7Q9GZV3 580 aa11.48□□□□□ -0.57
SQSTM1-205ENST00000464493 CCL28Q9NRJ3 127 aa11.48□□□□□ -0.57
SQSTM1-205ENST00000464493 FABP12A6NFH5 140 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 RRHO14718 337 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 CTDSPLO15194 276 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 KCNAB3O43448 404 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 S100A5P33763 92 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 LGALS7P47929 136 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 DGCR2P98153 550 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 EIF4EBP1Q13541 118 aaPredicted RBP11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 PSG5Q15238 335 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 ACTBL2Q562R1 376 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 LIN54Q6MZP7 749 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 ZNF66Q6ZN08 573 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 TMEM17Q86X19 198 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 C11orf44Q8N8P7 122 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 ZBTB34Q8NCN2 500 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 OR5AU1Q8NGC0 362 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 SGMS2Q8NHU3 365 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 MOB3AQ96BX8 217 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 NOL4LQ96MY1 436 aaPredicted RBP11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 SOSTQ9BQB4 213 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 HSPB9Q9BQS6 159 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 TAS2R8Q9NYW2 309 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 ZNF107Q9UII5 783 aaPredicted RBP11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 PRELID3BQ9Y3B1 194 aa11.47□□□□□ -0.57
SQSTM1-205ENST00000464493 AP4M1O00189 453 aa11.46□□□□□ -0.57
SQSTM1-205ENST00000464493 FCGR3BO75015 233 aa11.46□□□□□ -0.57
SQSTM1-205ENST00000464493 FBXO24O75426 580 aa11.46□□□□□ -0.57
SQSTM1-205ENST00000464493 SPDEFO95238 335 aa11.46□□□□□ -0.57
SQSTM1-205ENST00000464493 HLA-DRB1P01911 266 aa11.46□□□□□ -0.57
SQSTM1-205ENST00000464493 GNRHRP30968 328 aa11.46□□□□□ -0.57
SQSTM1-205ENST00000464493 RPL30P62888 115 aaKnown RBP11.46□□□□□ -0.57
SQSTM1-205ENST00000464493 SSBP1Q04837 148 aaKnown RBP11.46□□□□□ -0.57
SQSTM1-205ENST00000464493 PLGLAQ15195 96 aa11.46□□□□□ -0.57
SQSTM1-205ENST00000464493 TMEM177Q53S58 311 aa11.46□□□□□ -0.57
SQSTM1-205ENST00000464493 VAX1Q5SQQ9 334 aa11.46□□□□□ -0.57
SQSTM1-205ENST00000464493 FOXB2Q5VYV0 432 aa11.46□□□□□ -0.57
SQSTM1-205ENST00000464493 KCTD9Q7L273 389 aa11.46□□□□□ -0.57
SQSTM1-205ENST00000464493 MFSD4AQ8N468 514 aa11.46□□□□□ -0.57
SQSTM1-205ENST00000464493 TMEM229BQ8NBD8 167 aa11.46□□□□□ -0.57
SQSTM1-205ENST00000464493 CHPT1Q8WUD6 406 aa11.46□□□□□ -0.57
SQSTM1-205ENST00000464493 SMIM4Q8WVI0 70 aa11.46□□□□□ -0.57
SQSTM1-205ENST00000464493 BORCS5Q969J3 196 aa11.46□□□□□ -0.57
SQSTM1-205ENST00000464493 FBXL15Q9H469 300 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms