RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 C15orf40Q8WUR7 153 aa12.18□□□□□ -0.46
RAB11FIP3-208ENST00000464263 DDB2Q92466 427 aa12.18□□□□□ -0.46
RAB11FIP3-208ENST00000464263 TET2Q6N021 2002 aaPredicted RBP12.18□□□□□ -0.46
RAB11FIP3-208ENST00000464263 LINC00473A8K010 186 aa12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 PEX14O75381 377 aa12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 APOA2P02652 100 aa12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 HLA-DMAP28067 261 aa12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 TAS2R46P59540 309 aa12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 TAGLNQ01995 201 aaKnown RBP12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 C5orf64Q2M2E5 130 aa12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 SLC35E3Q7Z769 313 aa12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 CENPVQ7Z7K6 275 aaPredicted RBP12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 OR5H2Q8NGV7 314 aa12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 OR52I2Q8NH67 350 aa12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 SGMS2Q8NHU3 365 aa12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 MCFD2Q8NI22 146 aa12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 ADTRPQ96IZ2 230 aa12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 HSPB9Q9BQS6 159 aa12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 C6orf62Q9GZU0 229 aaPredicted RBP12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 SLC35D1Q9NTN3 355 aa12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 EHFQ9NZC4 300 aa12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 KLK11Q9UBX7 282 aa12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 RBMX2Q9Y388 322 aaKnown RBP12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 PLXNB1O43157 2135 aa12.17□□□□□ -0.46
RAB11FIP3-208ENST00000464263 RRHO14718 337 aa12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 CD28P10747 220 aa12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 TNFSF8P32971 234 aa12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 RCVRNP35243 200 aa12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 HRH1P35367 487 aa12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 RPS16P62249 146 aaKnown RBP12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 HIST2H2BDQ6DRA6 164 aa12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 LIN54Q6MZP7 749 aa12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 C11orf44Q8N8P7 122 aa12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 BVESQ8NE79 360 aa12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 OR5AU1Q8NGC0 362 aa12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 SECTM1Q8WVN6 248 aa12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 FCAMRQ8WWV6 532 aa12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 FLYWCH2Q96CP2 140 aaKnown RBP12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 DIRAS2Q96HU8 199 aa12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 NOL4LQ96MY1 436 aaPredicted RBP12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 SOSTQ9BQB4 213 aa12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 DCUN1D5Q9BTE7 237 aa12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 CCL28Q9NRJ3 127 aa12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 MTFP1Q9UDX5 166 aa12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 ZNF107Q9UII5 783 aaPredicted RBP12.16□□□□□ -0.46
RAB11FIP3-208ENST00000464263 GABARAPH6UMI1 98 aa12.15□□□□□ -0.46
RAB11FIP3-208ENST00000464263 HLA-DRB1P01911 266 aa12.15□□□□□ -0.46
RAB11FIP3-208ENST00000464263 RRASP10301 218 aa12.15□□□□□ -0.46
RAB11FIP3-208ENST00000464263 RPL30P62888 115 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-208ENST00000464263 PSG5Q15238 335 aa12.15□□□□□ -0.46
RAB11FIP3-208ENST00000464263 MSMO1Q15800 293 aa12.15□□□□□ -0.46
RAB11FIP3-208ENST00000464263 RNASE12Q5GAN4 147 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-208ENST00000464263 C10orf99Q6UWK7 81 aa12.15□□□□□ -0.46
RAB11FIP3-208ENST00000464263 DGCR14Q96DF8 476 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-208ENST00000464263 MMP27Q9H306 513 aa12.15□□□□□ -0.46
RAB11FIP3-208ENST00000464263 FBXL15Q9H469 300 aa12.15□□□□□ -0.46
RAB11FIP3-208ENST00000464263 KIAA1456Q9P272 454 aa12.15□□□□□ -0.46
RAB11FIP3-208ENST00000464263 RABL2AQ9UBK7 228 aaPredicted RBP12.15□□□□□ -0.46
RAB11FIP3-208ENST00000464263 LINC00527Q9UJ94 153 aa12.15□□□□□ -0.46
RAB11FIP3-208ENST00000464263 RABL2BQ9UNT1 228 aa12.15□□□□□ -0.46
RAB11FIP3-208ENST00000464263 DPPA5A6NC42 116 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 FCN1O00602 326 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 CTDSPLO15194 276 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 KCNAB3O43448 404 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 FBXO24O75426 580 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 IGLV2-23P01705 113 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 LGALS7P47929 136 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 FXYD4P59646 89 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 TMEM177Q53S58 311 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 TCTEX1D4Q5JR98 221 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 PYHIN1Q6K0P9 492 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 FOXRED2Q8IWF2 684 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 STPG2Q8N412 459 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 MFSD4AQ8N468 514 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 ZBTB34Q8NCN2 500 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 OR6F1Q8NGZ6 308 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 CHPT1Q8WUD6 406 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 MOB3AQ96BX8 217 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 TSNAXQ99598 290 aaKnown RBP12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 HSD17B10Q99714 261 aaKnown RBP12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 ZNF2Q9BSG1 426 aaPredicted RBP12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 SLC5A7Q9GZV3 580 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 NDUFA13Q9P0J0 144 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 A3GALT2U3KPV4 340 aa12.14□□□□□ -0.47
RAB11FIP3-208ENST00000464263 IGHV7-81A0A0B4J1V7 117 aa12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 PSMB11A5LHX3 300 aa12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 SRRM4A7MD48 611 aaKnown RBP12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 AP4M1O00189 453 aa12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 IGF1P05019 195 aa12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 CRYGBP07316 175 aa12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 GNRHRP30968 328 aa12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 BRWD1-AS2P59051 145 aa12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 MRPS10P82664 201 aaKnown RBP12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 DGCR2P98153 550 aa12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 CD83Q01151 205 aa12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 IL18Q14116 193 aa12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 RTL8BQ17RB0 113 aa12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 PRR31Q5SQ13 230 aa12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 VAX1Q5SQQ9 334 aa12.13□□□□□ -0.47
RAB11FIP3-208ENST00000464263 ZNF66Q6ZN08 573 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms