RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 BPIFB6Q8NFQ5 453 aa17.25■□□□□ 0.35
USP4-208ENST00000464168 OR9G4Q8NGQ1 327 aa17.25■□□□□ 0.35
USP4-208ENST00000464168 THAP7Q9BT49 309 aaPredicted RBP17.25■□□□□ 0.35
USP4-208ENST00000464168 MGAT4AQ9UM21 535 aa17.25■□□□□ 0.35
USP4-208ENST00000464168 IGKV1-6A0A0C4DH72 117 aa17.24■□□□□ 0.35
USP4-208ENST00000464168 CNIH1O95406 144 aa17.24■□□□□ 0.35
USP4-208ENST00000464168 IGLV2-23P01705 113 aa17.24■□□□□ 0.35
USP4-208ENST00000464168 SYNJ2BPP57105 145 aa17.24■□□□□ 0.35
USP4-208ENST00000464168 MOGAT2Q3SYC2 334 aa17.24■□□□□ 0.35
USP4-208ENST00000464168 CEACAM19Q7Z692 300 aa17.24■□□□□ 0.35
USP4-208ENST00000464168 C8orf4Q9NR00 106 aa17.24■□□□□ 0.35
USP4-208ENST00000464168 FOXI3A8MTJ6 420 aaPredicted RBP17.23■□□□□ 0.35
USP4-208ENST00000464168 H0Y980 276 aa17.23■□□□□ 0.35
USP4-208ENST00000464168 APOA2P02652 100 aa17.23■□□□□ 0.35
USP4-208ENST00000464168 CRYGBP07316 175 aa17.23■□□□□ 0.35
USP4-208ENST00000464168 TMEM50BP56557 158 aa17.23■□□□□ 0.35
USP4-208ENST00000464168 HSD17B12Q53GQ0 312 aa17.23■□□□□ 0.35
USP4-208ENST00000464168 OR6M1Q8NGM8 313 aa17.23■□□□□ 0.35
USP4-208ENST00000464168 URM1Q9BTM9 101 aaKnown RBP17.23■□□□□ 0.35
USP4-208ENST00000464168 C12orf4Q9NQ89 552 aa17.23■□□□□ 0.35
USP4-208ENST00000464168 ADAM30Q9UKF2 790 aa17.23■□□□□ 0.35
USP4-208ENST00000464168 HSF4Q9ULV5 492 aa17.23■□□□□ 0.35
USP4-208ENST00000464168 M0R1X1 148 aa17.22■□□□□ 0.35
USP4-208ENST00000464168 BRI3O95415 125 aa17.22■□□□□ 0.35
USP4-208ENST00000464168 UCHL1P09936 223 aa17.22■□□□□ 0.35
USP4-208ENST00000464168 P2RY14Q15391 338 aa17.22■□□□□ 0.35
USP4-208ENST00000464168 TINAGL1Q9GZM7 467 aaPredicted RBP17.22■□□□□ 0.35
USP4-208ENST00000464168 SLC35D1Q9NTN3 355 aa17.22■□□□□ 0.35
USP4-208ENST00000464168 RDH8Q9NYR8 311 aa17.22■□□□□ 0.35
USP4-208ENST00000464168 TRBV12-3P01733 135 aa17.21■□□□□ 0.35
USP4-208ENST00000464168 CSN3P07498 182 aa17.21■□□□□ 0.35
USP4-208ENST00000464168 LGALS7P47929 136 aa17.21■□□□□ 0.35
USP4-208ENST00000464168 DEFA5Q01523 94 aa17.21■□□□□ 0.35
USP4-208ENST00000464168 RNLSQ5VYX0 342 aa17.21■□□□□ 0.35
USP4-208ENST00000464168 ZNF343Q6P1L6 599 aa17.21■□□□□ 0.35
USP4-208ENST00000464168 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.21■□□□□ 0.35
USP4-208ENST00000464168 ARHGAP5-AS1Q96IT6 56 aa17.21■□□□□ 0.35
USP4-208ENST00000464168 TMEM68Q96MH6 324 aa17.21■□□□□ 0.35
USP4-208ENST00000464168 GFI1Q99684 422 aa17.21■□□□□ 0.35
USP4-208ENST00000464168 MND1Q9BWT6 205 aa17.21■□□□□ 0.35
USP4-208ENST00000464168 PEF1Q9UBV8 284 aaKnown RBP17.21■□□□□ 0.35
USP4-208ENST00000464168 LSM2Q9Y333 95 aaKnown RBP17.21■□□□□ 0.35
USP4-208ENST00000464168 TUBA4BQ9H853 241 aa17.2■□□□□ 0.34
USP4-208ENST00000464168 SIGLEC8Q9NYZ4 499 aa17.2■□□□□ 0.34
USP4-208ENST00000464168 HYDINQ4G0P3 5121 aa17.2■□□□□ 0.34
USP4-208ENST00000464168 IZUMO1RA6ND01 250 aa17.19■□□□□ 0.34
USP4-208ENST00000464168 TRDCB7Z8K6 153 aa17.19■□□□□ 0.34
USP4-208ENST00000464168 SLC17A2O00624 439 aa17.19■□□□□ 0.34
USP4-208ENST00000464168 RBMXL2O75526 392 aaKnown RBP17.19■□□□□ 0.34
USP4-208ENST00000464168 IFNA6P05013 189 aa17.19■□□□□ 0.34
USP4-208ENST00000464168 CDK1P06493 297 aa17.19■□□□□ 0.34
USP4-208ENST00000464168 AADACP22760 399 aa17.19■□□□□ 0.34
USP4-208ENST00000464168 DYRK1AQ13627 763 aa17.19■□□□□ 0.34
USP4-208ENST00000464168 SPHARQ15513 63 aa17.19■□□□□ 0.34
USP4-208ENST00000464168 CMSS1Q9BQ75 279 aaKnown RBP17.19■□□□□ 0.34
USP4-208ENST00000464168 PECRQ9BY49 303 aa17.19■□□□□ 0.34
USP4-208ENST00000464168 SRRM4A7MD48 611 aaKnown RBP17.18■□□□□ 0.34
USP4-208ENST00000464168 MRGPRG-AS1Q2M3A8 158 aa17.18■□□□□ 0.34
USP4-208ENST00000464168 PLAC9Q5JTB6 97 aa17.18■□□□□ 0.34
USP4-208ENST00000464168 LCN12Q6JVE5 192 aa17.18■□□□□ 0.34
USP4-208ENST00000464168 GTSCR1Q86UQ5 136 aa17.18■□□□□ 0.34
USP4-208ENST00000464168 BVESQ8NE79 360 aa17.18■□□□□ 0.34
USP4-208ENST00000464168 USMG5Q96IX5 58 aa17.18■□□□□ 0.34
USP4-208ENST00000464168 PLGRKTQ9HBL7 147 aa17.18■□□□□ 0.34
USP4-208ENST00000464168 CD3GP09693 182 aa17.17■□□□□ 0.34
USP4-208ENST00000464168 MECP2P51608 486 aaKnown RBP17.17■□□□□ 0.34
USP4-208ENST00000464168 TATDN3Q17R31 274 aa17.17■□□□□ 0.34
USP4-208ENST00000464168 TMEM91Q6ZNR0 172 aa17.17■□□□□ 0.34
USP4-208ENST00000464168 Q8N402 240 aa17.17■□□□□ 0.34
USP4-208ENST00000464168 TMEM203Q969S6 136 aa17.17■□□□□ 0.34
USP4-208ENST00000464168 HARBI1Q96MB7 349 aa17.17■□□□□ 0.34
USP4-208ENST00000464168 SDHAF2Q9NX18 166 aa17.17■□□□□ 0.34
USP4-208ENST00000464168 PLECQ15149 4684 aaKnown RBP17.17■□□□□ 0.34
USP4-208ENST00000464168 PTGES3LE9PB15 166 aa17.16■□□□□ 0.34
USP4-208ENST00000464168 APELAP0DMC3 54 aa17.16■□□□□ 0.34
USP4-208ENST00000464168 SERPINB10P48595 397 aa17.16■□□□□ 0.34
USP4-208ENST00000464168 RPEL1Q2QD12 228 aa17.16■□□□□ 0.34
USP4-208ENST00000464168 TMEM177Q53S58 311 aa17.16■□□□□ 0.34
USP4-208ENST00000464168 OR4A4PQ8NGN8 299 aa17.16■□□□□ 0.34
USP4-208ENST00000464168 C5orf30Q96GV9 206 aa17.16■□□□□ 0.34
USP4-208ENST00000464168 OR2D2Q9H210 308 aa17.16■□□□□ 0.34
USP4-208ENST00000464168 COA4Q9NYJ1 87 aa17.16■□□□□ 0.34
USP4-208ENST00000464168 AK6Q9Y3D8 172 aaKnown RBP17.16■□□□□ 0.34
USP4-208ENST00000464168 MSGN1A6NI15 193 aa17.15■□□□□ 0.34
USP4-208ENST00000464168 OR2A4O95047 310 aa17.15■□□□□ 0.34
USP4-208ENST00000464168 CLDN12P56749 244 aa17.15■□□□□ 0.34
USP4-208ENST00000464168 MED22Q15528 200 aa17.15■□□□□ 0.34
USP4-208ENST00000464168 RAB11BQ15907 218 aa17.15■□□□□ 0.34
USP4-208ENST00000464168 IGSF11Q5DX21 431 aa17.15■□□□□ 0.34
USP4-208ENST00000464168 LIPKQ5VXJ0 399 aa17.15■□□□□ 0.34
USP4-208ENST00000464168 LINC00322Q6ZN03 302 aaPredicted RBP17.15■□□□□ 0.34
USP4-208ENST00000464168 ADAD2Q8NCV1 583 aaKnown RBP17.15■□□□□ 0.34
USP4-208ENST00000464168 RETNQ9HD89 108 aa17.15■□□□□ 0.34
USP4-208ENST00000464168 EBAG9O00559 213 aa17.14■□□□□ 0.33
USP4-208ENST00000464168 BET1O15155 118 aa17.14■□□□□ 0.33
USP4-208ENST00000464168 SHOXO15266 292 aa17.14■□□□□ 0.33
USP4-208ENST00000464168 FABP7O15540 132 aa17.14■□□□□ 0.33
USP4-208ENST00000464168 RCN1Q15293 331 aa17.14■□□□□ 0.33
USP4-208ENST00000464168 OR56B1Q8NGI3 324 aa17.14■□□□□ 0.33
USP4-208ENST00000464168 SNAPC3Q92966 411 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms