RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 OVOL1O14753 267 aa14.59□□□□□ -0.07
SF3A1-205ENST00000463818 FABP7O15540 132 aa14.59□□□□□ -0.07
SF3A1-205ENST00000463818 NHLRC4P0CG21 123 aaPredicted RBP14.59□□□□□ -0.07
SF3A1-205ENST00000463818 SERPINB10P48595 397 aa14.59□□□□□ -0.07
SF3A1-205ENST00000463818 ACTBL2Q562R1 376 aa14.59□□□□□ -0.07
SF3A1-205ENST00000463818 IGSF11Q5DX21 431 aa14.59□□□□□ -0.07
SF3A1-205ENST00000463818 LFNGQ8NES3 379 aa14.59□□□□□ -0.07
SF3A1-205ENST00000463818 OR10R2Q8NGX6 335 aa14.59□□□□□ -0.07
SF3A1-205ENST00000463818 DLX4Q92988 240 aaPredicted RBP14.59□□□□□ -0.07
SF3A1-205ENST00000463818 FLYWCH2Q96CP2 140 aaKnown RBP14.59□□□□□ -0.07
SF3A1-205ENST00000463818 MS4A10Q96PG2 267 aa14.59□□□□□ -0.07
SF3A1-205ENST00000463818 TPSG1Q9NRR2 321 aa14.59□□□□□ -0.07
SF3A1-205ENST00000463818 ZNF256Q9Y2P7 627 aaPredicted RBP14.59□□□□□ -0.07
SF3A1-205ENST00000463818 COL7A1Q02388 2944 aa14.58□□□□□ -0.08
SF3A1-205ENST00000463818 LINC01619G3V211 115 aa14.58□□□□□ -0.08
SF3A1-205ENST00000463818 BET1O15155 118 aa14.58□□□□□ -0.08
SF3A1-205ENST00000463818 CA2P00918 260 aa14.58□□□□□ -0.08
SF3A1-205ENST00000463818 APOA2P02652 100 aa14.58□□□□□ -0.08
SF3A1-205ENST00000463818 FCGR3AP08637 254 aa14.58□□□□□ -0.08
SF3A1-205ENST00000463818 OR8U9P0C7N5 309 aa14.58□□□□□ -0.08
SF3A1-205ENST00000463818 GSTT2P0CG29 244 aa14.58□□□□□ -0.08
SF3A1-205ENST00000463818 GSTT2BP0CG30 244 aa14.58□□□□□ -0.08
SF3A1-205ENST00000463818 GNB3P16520 340 aa14.58□□□□□ -0.08
SF3A1-205ENST00000463818 SLURP1P55000 103 aa14.58□□□□□ -0.08
SF3A1-205ENST00000463818 ZNF429Q86V71 674 aa14.58□□□□□ -0.08
SF3A1-205ENST00000463818 PDPNQ86YL7 162 aa14.58□□□□□ -0.08
SF3A1-205ENST00000463818 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.58□□□□□ -0.08
SF3A1-205ENST00000463818 WWC2-AS2Q96NR7 200 aa14.58□□□□□ -0.08
SF3A1-205ENST00000463818 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.58□□□□□ -0.08
SF3A1-205ENST00000463818 SLC35D1Q9NTN3 355 aa14.58□□□□□ -0.08
SF3A1-205ENST00000463818 A0A075B6Q4 140 aa14.57□□□□□ -0.08
SF3A1-205ENST00000463818 TRDV1A0A1B0GX56 115 aa14.57□□□□□ -0.08
SF3A1-205ENST00000463818 TRIM64CA6NLI5 447 aa14.57□□□□□ -0.08
SF3A1-205ENST00000463818 IFITM5A6NNB3 132 aa14.57□□□□□ -0.08
SF3A1-205ENST00000463818 RAB27BO00194 218 aa14.57□□□□□ -0.08
SF3A1-205ENST00000463818 SPDEFO95238 335 aa14.57□□□□□ -0.08
SF3A1-205ENST00000463818 TNFAIP8O95379 198 aa14.57□□□□□ -0.08
SF3A1-205ENST00000463818 LY86O95711 162 aa14.57□□□□□ -0.08
SF3A1-205ENST00000463818 IGHV3-11P01762 117 aa14.57□□□□□ -0.08
SF3A1-205ENST00000463818 LGALS1P09382 135 aaKnown RBP14.57□□□□□ -0.08
SF3A1-205ENST00000463818 GADD45AP24522 165 aa14.57□□□□□ -0.08
SF3A1-205ENST00000463818 FXYD3Q14802 87 aa14.57□□□□□ -0.08
SF3A1-205ENST00000463818 PYHIN1Q6K0P9 492 aa14.57□□□□□ -0.08
SF3A1-205ENST00000463818 OR10J5Q8NHC4 309 aa14.57□□□□□ -0.08
SF3A1-205ENST00000463818 MAFIPQ8WZ33 124 aa14.57□□□□□ -0.08
SF3A1-205ENST00000463818 RHOVQ96L33 236 aa14.57□□□□□ -0.08
SF3A1-205ENST00000463818 ZNF230Q9UIE0 474 aaPredicted RBP14.57□□□□□ -0.08
SF3A1-205ENST00000463818 IGHV4OR15-8A0A075B7B6 117 aa14.56□□□□□ -0.08
SF3A1-205ENST00000463818 A0A087WW49 117 aa14.56□□□□□ -0.08
SF3A1-205ENST00000463818 TRBV6-7A0A0A0MS04 114 aa14.56□□□□□ -0.08
SF3A1-205ENST00000463818 A0A0B4J203 849 aa14.56□□□□□ -0.08
SF3A1-205ENST00000463818 SLC25A17O43808 307 aa14.56□□□□□ -0.08
SF3A1-205ENST00000463818 RAB3BP20337 219 aa14.56□□□□□ -0.08
SF3A1-205ENST00000463818 RAB6AP20340 208 aa14.56□□□□□ -0.08
SF3A1-205ENST00000463818 MYL9P24844 172 aa14.56□□□□□ -0.08
SF3A1-205ENST00000463818 CD40LGP29965 261 aa14.56□□□□□ -0.08
SF3A1-205ENST00000463818 FGF9P31371 208 aaPredicted RBP14.56□□□□□ -0.08
SF3A1-205ENST00000463818 ARPC1AQ92747 370 aa14.56□□□□□ -0.08
SF3A1-205ENST00000463818 CABLES2Q9BTV7 478 aa14.56□□□□□ -0.08
SF3A1-205ENST00000463818 SDHAF2Q9NX18 166 aa14.56□□□□□ -0.08
SF3A1-205ENST00000463818 METTL21EPA6NDL7 271 aa14.55□□□□□ -0.08
SF3A1-205ENST00000463818 MFNGO00587 321 aa14.55□□□□□ -0.08
SF3A1-205ENST00000463818 ARPC1BO15143 372 aaKnown RBP14.55□□□□□ -0.08
SF3A1-205ENST00000463818 SAP30O75446 220 aa14.55□□□□□ -0.08
SF3A1-205ENST00000463818 HSPB1P04792 205 aaKnown RBP14.55□□□□□ -0.08
SF3A1-205ENST00000463818 HIST1H1DP16402 221 aaKnown RBP14.55□□□□□ -0.08
SF3A1-205ENST00000463818 LGALS7P47929 136 aa14.55□□□□□ -0.08
SF3A1-205ENST00000463818 TPPP2P59282 170 aa14.55□□□□□ -0.08
SF3A1-205ENST00000463818 GRPEL2Q8TAA5 225 aa14.55□□□□□ -0.08
SF3A1-205ENST00000463818 ASCL2Q99929 193 aa14.55□□□□□ -0.08
SF3A1-205ENST00000463818 OR2D2Q9H210 308 aa14.55□□□□□ -0.08
SF3A1-205ENST00000463818 CNIH1O95406 144 aa14.54□□□□□ -0.08
SF3A1-205ENST00000463818 IGLV2-23P01705 113 aa14.54□□□□□ -0.08
SF3A1-205ENST00000463818 TRGV3P03979 118 aa14.54□□□□□ -0.08
SF3A1-205ENST00000463818 CRYGBP07316 175 aa14.54□□□□□ -0.08
SF3A1-205ENST00000463818 PSMB9P28065 219 aa14.54□□□□□ -0.08
SF3A1-205ENST00000463818 TALDO1P37837 337 aa14.54□□□□□ -0.08
SF3A1-205ENST00000463818 PJVKQ0ZLH3 352 aa14.54□□□□□ -0.08
SF3A1-205ENST00000463818 C22orf42Q6IC83 251 aa14.54□□□□□ -0.08
SF3A1-205ENST00000463818 OR5T1Q8NG75 326 aa14.54□□□□□ -0.08
SF3A1-205ENST00000463818 C5orf30Q96GV9 206 aa14.54□□□□□ -0.08
SF3A1-205ENST00000463818 SLA2Q9H6Q3 261 aa14.54□□□□□ -0.08
SF3A1-205ENST00000463818 ZNF355PQ9NSJ1 428 aa14.54□□□□□ -0.08
SF3A1-205ENST00000463818 RBM7Q9Y580 266 aaKnown RBP14.54□□□□□ -0.08
SF3A1-205ENST00000463818 U3KQK5 164 aa14.54□□□□□ -0.08
SF3A1-205ENST00000463818 DIRAS3O95661 229 aa14.53□□□□□ -0.08
SF3A1-205ENST00000463818 SSBP2P81877 361 aaPredicted RBP14.53□□□□□ -0.08
SF3A1-205ENST00000463818 TAGLNQ01995 201 aaKnown RBP14.53□□□□□ -0.08
SF3A1-205ENST00000463818 ARFRP1Q13795 201 aa14.53□□□□□ -0.08
SF3A1-205ENST00000463818 NR2C2APQ86WQ0 139 aa14.53□□□□□ -0.08
SF3A1-205ENST00000463818 BVESQ8NE79 360 aa14.53□□□□□ -0.08
SF3A1-205ENST00000463818 ATG5Q9H1Y0 275 aa14.53□□□□□ -0.08
SF3A1-205ENST00000463818 SMAD5-AS1Q9Y6J3 95 aa14.53□□□□□ -0.08
SF3A1-205ENST00000463818 A0A087WXM4 84 aa14.52□□□□□ -0.09
SF3A1-205ENST00000463818 SRRM4A7MD48 611 aaKnown RBP14.52□□□□□ -0.09
SF3A1-205ENST00000463818 SRSF7Q16629 238 aaKnown RBP eCLIP14.52□□□□□ -0.09
SF3A1-205ENST00000463818 CDNFQ49AH0 187 aa14.52□□□□□ -0.09
SF3A1-205ENST00000463818 TMEM177Q53S58 311 aa14.52□□□□□ -0.09
SF3A1-205ENST00000463818 ACSM6Q6P461 480 aa14.52□□□□□ -0.09
SF3A1-205ENST00000463818 POC5Q8NA72 575 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms