RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 LINC01006Q8NI28 216 aa15.8■□□□□ 0.12
COL9A3-204ENST00000463487 ZNF2Q9BSG1 426 aaPredicted RBP15.8■□□□□ 0.12
COL9A3-204ENST00000463487 SLC5A7Q9GZV3 580 aa15.8■□□□□ 0.12
COL9A3-204ENST00000463487 PRELID3BQ9Y3B1 194 aa15.8■□□□□ 0.12
COL9A3-204ENST00000463487 GSTZ1O43708 216 aaPredicted RBP15.79■□□□□ 0.12
COL9A3-204ENST00000463487 ABCA11PQ4W5N1 156 aa15.79■□□□□ 0.12
COL9A3-204ENST00000463487 VAX1Q5SQQ9 334 aa15.79■□□□□ 0.12
COL9A3-204ENST00000463487 FOXB2Q5VYV0 432 aa15.79■□□□□ 0.12
COL9A3-204ENST00000463487 GLDNQ6ZMI3 551 aaPredicted RBP15.79■□□□□ 0.12
COL9A3-204ENST00000463487 Q8N2B8 174 aa15.79■□□□□ 0.12
COL9A3-204ENST00000463487 C5orf56Q8N8D9 126 aa15.79■□□□□ 0.12
COL9A3-204ENST00000463487 TMEM229BQ8NBD8 167 aa15.79■□□□□ 0.12
COL9A3-204ENST00000463487 HSD17B10Q99714 261 aaKnown RBP15.79■□□□□ 0.12
COL9A3-204ENST00000463487 RNF5Q99942 180 aa15.79■□□□□ 0.12
COL9A3-204ENST00000463487 RASL11BQ9BPW5 248 aa15.79■□□□□ 0.12
COL9A3-204ENST00000463487 SLC35D1Q9NTN3 355 aa15.79■□□□□ 0.12
COL9A3-204ENST00000463487 RBMX2Q9Y388 322 aaKnown RBP15.79■□□□□ 0.12
COL9A3-204ENST00000463487 FBN1P35555 2871 aaKnown RBP15.79■□□□□ 0.12
COL9A3-204ENST00000463487 IGKV1D-13A0A0B4J2D9 117 aa15.78■□□□□ 0.12
COL9A3-204ENST00000463487 IGKV1-13P0DP09 117 aa15.78■□□□□ 0.12
COL9A3-204ENST00000463487 S100GP29377 79 aa15.78■□□□□ 0.12
COL9A3-204ENST00000463487 PYDC2Q56P42 97 aa15.78■□□□□ 0.12
COL9A3-204ENST00000463487 LPCAT3Q6P1A2 487 aa15.78■□□□□ 0.12
COL9A3-204ENST00000463487 KCTD9Q7L273 389 aa15.78■□□□□ 0.12
COL9A3-204ENST00000463487 ZNF383Q8NA42 475 aa15.78■□□□□ 0.12
COL9A3-204ENST00000463487 TAF15Q92804 592 aaKnown RBP eCLIP15.78■□□□□ 0.12
COL9A3-204ENST00000463487 ZNF702PQ9H963 129 aa15.78■□□□□ 0.12
COL9A3-204ENST00000463487 LIN7CQ9NUP9 197 aaKnown RBP15.78■□□□□ 0.12
COL9A3-204ENST00000463487 COL6A5A8TX70 2615 aa15.78■□□□□ 0.12
COL9A3-204ENST00000463487 PROP1O75360 226 aa15.77■□□□□ 0.12
COL9A3-204ENST00000463487 CD3DP04234 171 aa15.77■□□□□ 0.12
COL9A3-204ENST00000463487 DUTP33316 252 aaKnown RBP15.77■□□□□ 0.12
COL9A3-204ENST00000463487 VDAC2P45880 294 aaPredicted RBP15.77■□□□□ 0.12
COL9A3-204ENST00000463487 BLCAPP62952 87 aa15.77■□□□□ 0.12
COL9A3-204ENST00000463487 MEF2DQ14814 521 aa15.77■□□□□ 0.12
COL9A3-204ENST00000463487 FBLN7Q53RD9 439 aa15.77■□□□□ 0.12
COL9A3-204ENST00000463487 C9orf152Q5JTZ5 239 aa15.77■□□□□ 0.12
COL9A3-204ENST00000463487 ZNF66Q6ZN08 573 aa15.77■□□□□ 0.12
COL9A3-204ENST00000463487 CCDC190Q86UF4 302 aa15.77■□□□□ 0.12
COL9A3-204ENST00000463487 CMTM1Q8IZ96 169 aa15.77■□□□□ 0.12
COL9A3-204ENST00000463487 ARRDC1Q8N5I2 433 aa15.77■□□□□ 0.12
COL9A3-204ENST00000463487 MOB3AQ96BX8 217 aa15.77■□□□□ 0.12
COL9A3-204ENST00000463487 FLYWCH2Q96CP2 140 aaKnown RBP15.77■□□□□ 0.12
COL9A3-204ENST00000463487 TSNAXQ99598 290 aaKnown RBP15.77■□□□□ 0.12
COL9A3-204ENST00000463487 SOSTQ9BQB4 213 aa15.77■□□□□ 0.12
COL9A3-204ENST00000463487 A6NHS1 94 aa15.76■□□□□ 0.11
COL9A3-204ENST00000463487 NBR2O15453 112 aa15.76■□□□□ 0.11
COL9A3-204ENST00000463487 ETV6P41212 452 aa15.76■□□□□ 0.11
COL9A3-204ENST00000463487 CATR1Q13166 79 aa15.76■□□□□ 0.11
COL9A3-204ENST00000463487 STEAP1BQ6NZ63 245 aa15.76■□□□□ 0.11
COL9A3-204ENST00000463487 OR6Q1Q8NGQ2 317 aa15.76■□□□□ 0.11
COL9A3-204ENST00000463487 M0QYG6 137 aa15.75■□□□□ 0.11
COL9A3-204ENST00000463487 HAX1O00165 279 aa15.75■□□□□ 0.11
COL9A3-204ENST00000463487 KCNAB3O43448 404 aa15.75■□□□□ 0.11
COL9A3-204ENST00000463487 SPDEFO95238 335 aa15.75■□□□□ 0.11
COL9A3-204ENST00000463487 RAB3DO95716 219 aa15.75■□□□□ 0.11
COL9A3-204ENST00000463487 AKAIN1P0CW23 69 aa15.75■□□□□ 0.11
COL9A3-204ENST00000463487 KIR2DS2P43631 304 aa15.75■□□□□ 0.11
COL9A3-204ENST00000463487 AP3S2P59780 193 aa15.75■□□□□ 0.11
COL9A3-204ENST00000463487 RPS16P62249 146 aaKnown RBP15.75■□□□□ 0.11
COL9A3-204ENST00000463487 PLGLAQ15195 96 aa15.75■□□□□ 0.11
COL9A3-204ENST00000463487 ZNF660Q6AZW8 331 aaPredicted RBP15.75■□□□□ 0.11
COL9A3-204ENST00000463487 Q8N9W7 124 aa15.75■□□□□ 0.11
COL9A3-204ENST00000463487 NPBQ8NG41 125 aa15.75■□□□□ 0.11
COL9A3-204ENST00000463487 TCTEX1D2Q8WW35 142 aa15.75■□□□□ 0.11
COL9A3-204ENST00000463487 CCL28Q9NRJ3 127 aa15.75■□□□□ 0.11
COL9A3-204ENST00000463487 CD74P04233 296 aa15.74■□□□□ 0.11
COL9A3-204ENST00000463487 AMY1AP04745 511 aa15.74■□□□□ 0.11
COL9A3-204ENST00000463487 AMY2AP04746 511 aa15.74■□□□□ 0.11
COL9A3-204ENST00000463487 LGALS7P47929 136 aa15.74■□□□□ 0.11
COL9A3-204ENST00000463487 PROK1P58294 105 aa15.74■□□□□ 0.11
COL9A3-204ENST00000463487 FOXRED2Q8IWF2 684 aa15.74■□□□□ 0.11
COL9A3-204ENST00000463487 Q8N402 240 aa15.74■□□□□ 0.11
COL9A3-204ENST00000463487 FAM71E2Q8N5Q1 922 aa15.74■□□□□ 0.11
COL9A3-204ENST00000463487 BVESQ8NE79 360 aa15.74■□□□□ 0.11
COL9A3-204ENST00000463487 C5orf30Q96GV9 206 aa15.74■□□□□ 0.11
COL9A3-204ENST00000463487 ZNF747Q9BV97 191 aa15.74■□□□□ 0.11
COL9A3-204ENST00000463487 PLSCR3Q9NRY6 295 aa15.74■□□□□ 0.11
COL9A3-204ENST00000463487 V9GYH0 126 aa15.74■□□□□ 0.11
COL9A3-204ENST00000463487 DISC1C4P0D8 188 aa15.73■□□□□ 0.11
COL9A3-204ENST00000463487 SHOXO15266 292 aa15.73■□□□□ 0.11
COL9A3-204ENST00000463487 IGKV1-16P04430 117 aa15.73■□□□□ 0.11
COL9A3-204ENST00000463487 FAUP35544 74 aaKnown RBP15.73■□□□□ 0.11
COL9A3-204ENST00000463487 F2RL1P55085 397 aa15.73■□□□□ 0.11
COL9A3-204ENST00000463487 SHISA2Q6UWI4 295 aa15.73■□□□□ 0.11
COL9A3-204ENST00000463487 SLC35E3Q7Z769 313 aa15.73■□□□□ 0.11
COL9A3-204ENST00000463487 POC5Q8NA72 575 aa15.73■□□□□ 0.11
COL9A3-204ENST00000463487 OR4S2Q8NH73 311 aa15.73■□□□□ 0.11
COL9A3-204ENST00000463487 WFDC12Q8WWY7 111 aa15.73■□□□□ 0.11
COL9A3-204ENST00000463487 HARBI1Q96MB7 349 aa15.73■□□□□ 0.11
COL9A3-204ENST00000463487 THAP7Q9BT49 309 aaPredicted RBP15.73■□□□□ 0.11
COL9A3-204ENST00000463487 LINC00473A8K010 186 aa15.72■□□□□ 0.11
COL9A3-204ENST00000463487 GPR31O00270 319 aa15.72■□□□□ 0.11
COL9A3-204ENST00000463487 RRHO14718 337 aa15.72■□□□□ 0.11
COL9A3-204ENST00000463487 NDUFA3O95167 84 aa15.72■□□□□ 0.11
COL9A3-204ENST00000463487 IGLV2-14P01704 120 aa15.72■□□□□ 0.11
COL9A3-204ENST00000463487 ECI1P42126 302 aa15.72■□□□□ 0.11
COL9A3-204ENST00000463487 UCP3P55916 312 aa15.72■□□□□ 0.11
COL9A3-204ENST00000463487 C5orf64Q2M2E5 130 aa15.72■□□□□ 0.11
COL9A3-204ENST00000463487 LIN54Q6MZP7 749 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms