RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 TOX4O94842 621 aa12.37□□□□□ -0.43
TMEM39A-203ENST00000461654 IFNA21P01568 189 aa12.37□□□□□ -0.43
TMEM39A-203ENST00000461654 COX7A1P24310 79 aa12.37□□□□□ -0.43
TMEM39A-203ENST00000461654 TMEM187Q14656 261 aa12.37□□□□□ -0.43
TMEM39A-203ENST00000461654 NCR3LG1Q68D85 454 aa12.37□□□□□ -0.43
TMEM39A-203ENST00000461654 ZNF695Q8IW36 515 aa12.37□□□□□ -0.43
TMEM39A-203ENST00000461654 TMEM186Q96B77 213 aa12.37□□□□□ -0.43
TMEM39A-203ENST00000461654 TP53RKQ96S44 253 aa12.37□□□□□ -0.43
TMEM39A-203ENST00000461654 RAB18Q9NP72 206 aa12.37□□□□□ -0.43
TMEM39A-203ENST00000461654 SAA2-SAA4A0A096LPE2 208 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 ATG12O94817 140 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 MSMBP08118 114 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 SAA2P0DJI9 122 aaPredicted RBP12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 UCP1P25874 307 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 KIR2DS2P43631 304 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 THBS3P49746 956 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 CD83Q01151 205 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 PAX2Q02962 417 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 ANKRD55Q3KP44 614 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 RPL39P5Q59GN2 51 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 UTF1Q5T230 341 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 FAM71F2Q6NXP2 309 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 VMO1Q7Z5L0 202 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 PNKDQ8N490 385 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 Q8N7P7 452 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 LRTM2Q8N967 370 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 BEND2Q8NDZ0 799 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 OR11H7Q8NGC8 314 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 CD300LFQ8TDQ1 290 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 GLYATL2Q8WU03 294 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 IL22RA2Q969J5 263 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 GPHA2Q96T91 129 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 SIRT7Q9NRC8 400 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 MMP26Q9NRE1 261 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 FAM212BQ9NTI7 297 aaPredicted RBP12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 INSIG2Q9Y5U4 225 aa12.36□□□□□ -0.43
TMEM39A-203ENST00000461654 TRAV20A0A0B4J274 112 aa12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 DUXBA0A1W2PPF3 345 aa12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 C5orf51A6NDU8 294 aa12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 FAM25EA8MYX2 175 aa12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 RPA2P15927 270 aa12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 DUTP33316 252 aaKnown RBP12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 TMEM268Q5VZI3 342 aa12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 GSG1LQ6UXU4 331 aa12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 IL17RELQ6ZVW7 336 aa12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 OR5M8Q8NGP6 311 aa12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 RNASE11Q8TAA1 199 aaKnown RBP12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 ASB13Q8WXK3 278 aa12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 PPP1R14BQ96C90 147 aa12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 NEURL2Q9BR09 285 aa12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 PCGF1Q9BSM1 259 aa12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 PDCD10Q9BUL8 212 aa12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 ZNF436Q9C0F3 470 aaPredicted RBP12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 SIRPDQ9H106 197 aa12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 UNKLQ9H9P5 680 aaKnown RBP12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 HIF1ANQ9NWT6 349 aa12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 PRR13Q9NZ81 148 aa12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 ATRQ13535 2644 aa12.35□□□□□ -0.43
TMEM39A-203ENST00000461654 DSCAML1Q8TD84 2053 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 C13orf42A0A1B0GVH6 325 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 DBX1A6NMT0 343 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 CDS2O95674 445 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 ARG1P05089 322 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 HOXB5P09067 269 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 HLA-GP17693 338 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 CXCL3P19876 107 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 GATA3P23771 443 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 CEACAM3P40198 252 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 TAGLNQ01995 201 aaKnown RBP12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 EIF4EBP1Q13541 118 aaPredicted RBP12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 HLA-DRB5Q30154 266 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 DCAF12L2Q5VW00 463 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 ZNF833PQ6ZTB9 187 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 ODF3L1Q8IXM7 274 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 SPAG16Q8N0X2 631 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 OR11H6Q8NGC7 330 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 RBPMSQ93062 196 aaKnown RBP12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 C5orf30Q96GV9 206 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 TMEM56Q96MV1 263 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 CHIAQ9BZP6 476 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 TMED3Q9Y3Q3 217 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 TMEM56-RWDD3S4R434 201 aa12.34□□□□□ -0.43
TMEM39A-203ENST00000461654 TXNL1O43396 289 aa12.33□□□□□ -0.44
TMEM39A-203ENST00000461654 IGLV1-47P01700 117 aa12.33□□□□□ -0.44
TMEM39A-203ENST00000461654 APOA2P02652 100 aa12.33□□□□□ -0.44
TMEM39A-203ENST00000461654 GIPP09681 153 aaPredicted RBP12.33□□□□□ -0.44
TMEM39A-203ENST00000461654 HTR1DP28221 377 aa12.33□□□□□ -0.44
TMEM39A-203ENST00000461654 LPAR6P43657 344 aa12.33□□□□□ -0.44
TMEM39A-203ENST00000461654 ZNF137PP52743 207 aa12.33□□□□□ -0.44
TMEM39A-203ENST00000461654 LGALS4P56470 323 aa12.33□□□□□ -0.44
TMEM39A-203ENST00000461654 RAP2BP61225 183 aa12.33□□□□□ -0.44
TMEM39A-203ENST00000461654 RPL30P62888 115 aaKnown RBP12.33□□□□□ -0.44
TMEM39A-203ENST00000461654 CYCSP99999 105 aaKnown RBP12.33□□□□□ -0.44
TMEM39A-203ENST00000461654 OR2B11Q5JQS5 317 aa12.33□□□□□ -0.44
TMEM39A-203ENST00000461654 TGIF2LXQ8IUE1 241 aa12.33□□□□□ -0.44
TMEM39A-203ENST00000461654 DRAXINQ8NBI3 349 aaPredicted RBP12.33□□□□□ -0.44
TMEM39A-203ENST00000461654 RANGRFQ9HD47 186 aaPredicted RBP12.33□□□□□ -0.44
TMEM39A-203ENST00000461654 CUBNO60494 3623 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 COL6A5A8TX70 2615 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 LEUTXA8MZ59 168 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms