RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 ATP6V1FQ16864 119 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 FAM201AQ5SY85 155 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 ZNF561Q8N587 486 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 RXFP4Q8TDU9 374 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 MBD3L1Q8WWY6 194 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 CIB3Q96Q77 187 aaPredicted RBP13.84□□□□□ -0.19
CCDC43-202ENST00000457422 RPRMQ9NS64 109 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 RNF7Q9UBF6 113 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 MLXQ9UH92 298 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 TIMM9Q9Y5J7 89 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 A0A0G2JNJ9 132 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 MARCH11A6NNE9 402 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 FAM90A9PA6NNJ1 464 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 ITGB1BP1O14713 200 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 SNRNP70P08621 437 aaKnown RBP13.84□□□□□ -0.19
CCDC43-202ENST00000457422 FOLR2P14207 255 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 AKR1C3P42330 323 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 ICAM4Q14773 271 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 AARDQ4LEZ3 155 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 CENPVQ7Z7K6 275 aaPredicted RBP13.84□□□□□ -0.19
CCDC43-202ENST00000457422 DOLPP1Q86YN1 238 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 DTD1Q8TEA8 209 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 TAF15Q92804 592 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCDC43-202ENST00000457422 SDSLQ96GA7 329 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 GCM1Q9NP62 436 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 RAB9BQ9NP90 201 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 Q9UFV3 132 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 BSNQ9UPA5 3926 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 PMS2P5A8MQ11 134 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 M0R036 132 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 PRRG2O14669 202 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 RBFOX2O43251 390 aaKnown RBP eCLIP13.83□□□□□ -0.2
CCDC43-202ENST00000457422 IGHV1-46P01743 117 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 SELLP14151 372 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 EDDM3BP56851 147 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 TNFAIP6P98066 277 aaPredicted RBP13.83□□□□□ -0.2
CCDC43-202ENST00000457422 KHDC3LQ587J8 217 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 AVPI1Q5T686 147 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 NCR3LG1Q68D85 454 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 CISD2Q8N5K1 135 aaKnown RBP13.83□□□□□ -0.2
CCDC43-202ENST00000457422 Q8TCH9 128 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 PINX1Q96BK5 328 aaKnown RBP13.83□□□□□ -0.2
CCDC43-202ENST00000457422 CLCC1Q96S66 551 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 ELOVL5Q9NYP7 299 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 CALYQ9NYX4 217 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 CLN8Q9UBY8 286 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 GAB2Q9UQC2 676 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 TANC2Q9HCD6 1990 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 ZG16O60844 167 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 HPRT1P00492 218 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 HAGHQ16775 308 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 STUMQ69YW2 141 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 Q8NA96 180 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 R3HDM4Q96D70 268 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 IFI27L2Q9H2X8 130 aa13.83□□□□□ -0.2
CCDC43-202ENST00000457422 CRYBA1P05813 215 aa13.82□□□□□ -0.2
CCDC43-202ENST00000457422 TMEM41BQ5BJD5 291 aa13.82□□□□□ -0.2
CCDC43-202ENST00000457422 OR8G2PQ6IF36 304 aa13.82□□□□□ -0.2
CCDC43-202ENST00000457422 OR10G4Q8NGN3 311 aa13.82□□□□□ -0.2
CCDC43-202ENST00000457422 VSIRQ9H7M9 311 aa13.82□□□□□ -0.2
CCDC43-202ENST00000457422 PLCE1Q9P212 2302 aa13.82□□□□□ -0.2
CCDC43-202ENST00000457422 UBE2L5PA0A1B0GUS4 154 aa13.81□□□□□ -0.2
CCDC43-202ENST00000457422 TNFSF4P23510 183 aa13.81□□□□□ -0.2
CCDC43-202ENST00000457422 FOXC1Q12948 553 aa13.81□□□□□ -0.2
CCDC43-202ENST00000457422 ZNF726P1Q15940 193 aa13.81□□□□□ -0.2
CCDC43-202ENST00000457422 C17orf58Q2M2W7 97 aa13.81□□□□□ -0.2
CCDC43-202ENST00000457422 DUX4L9Q6RFH8 374 aaPredicted RBP13.81□□□□□ -0.2
CCDC43-202ENST00000457422 TMEM108Q6UXF1 575 aa13.81□□□□□ -0.2
CCDC43-202ENST00000457422 ZDHHC16Q969W1 377 aa13.81□□□□□ -0.2
CCDC43-202ENST00000457422 C20orf24Q9BUV8 137 aa13.81□□□□□ -0.2
CCDC43-202ENST00000457422 TMEM147Q9BVK8 224 aa13.81□□□□□ -0.2
CCDC43-202ENST00000457422 APC2O95996 2303 aa13.81□□□□□ -0.2
CCDC43-202ENST00000457422 NBEAQ8NFP9 2946 aa13.81□□□□□ -0.2
CCDC43-202ENST00000457422 LOC102723971A0A1B0GUV8 181 aa13.81□□□□□ -0.2
CCDC43-202ENST00000457422 LY86O95711 162 aa13.81□□□□□ -0.2
CCDC43-202ENST00000457422 CYB5R3P00387 301 aaPredicted RBP13.81□□□□□ -0.2
CCDC43-202ENST00000457422 IGHV3-7P01780 117 aa13.81□□□□□ -0.2
CCDC43-202ENST00000457422 RAB7AP51149 207 aa13.81□□□□□ -0.2
CCDC43-202ENST00000457422 ZNF134P52741 427 aa13.81□□□□□ -0.2
CCDC43-202ENST00000457422 FAM234AQ9H0X4 552 aa13.81□□□□□ -0.2
CCDC43-202ENST00000457422 HCFC1P51610 2035 aa13.8□□□□□ -0.2
CCDC43-202ENST00000457422 C16orf97H3BN30 126 aa13.8□□□□□ -0.2
CCDC43-202ENST00000457422 M0R1X1 148 aa13.8□□□□□ -0.2
CCDC43-202ENST00000457422 PTAFRP25105 342 aa13.8□□□□□ -0.2
CCDC43-202ENST00000457422 VWC2Q2TAL6 325 aa13.8□□□□□ -0.2
CCDC43-202ENST00000457422 ZNF787Q6DD87 383 aa13.8□□□□□ -0.2
CCDC43-202ENST00000457422 HIST1H2BAQ96A08 127 aa13.8□□□□□ -0.2
CCDC43-202ENST00000457422 RCC1LQ96I51 464 aaKnown RBP13.8□□□□□ -0.2
CCDC43-202ENST00000457422 SH3BGRL2Q9UJC5 107 aa13.8□□□□□ -0.2
CCDC43-202ENST00000457422 RAI1Q7Z5J4 1906 aaPredicted RBP13.8□□□□□ -0.2
CCDC43-202ENST00000457422 SPTBN2O15020 2390 aa13.8□□□□□ -0.2
CCDC43-202ENST00000457422 FCGR3BO75015 233 aa13.79□□□□□ -0.2
CCDC43-202ENST00000457422 RBMXL2O75526 392 aaKnown RBP13.79□□□□□ -0.2
CCDC43-202ENST00000457422 TSPAN9O75954 239 aa13.79□□□□□ -0.2
CCDC43-202ENST00000457422 MT-ND4LP03901 98 aa13.79□□□□□ -0.2
CCDC43-202ENST00000457422 OR9G9P0C7N8 305 aa13.79□□□□□ -0.2
CCDC43-202ENST00000457422 KIR2DS2P43631 304 aa13.79□□□□□ -0.2
CCDC43-202ENST00000457422 RAB13P51153 203 aa13.79□□□□□ -0.2
CCDC43-202ENST00000457422 RNF212Q495C1 297 aa13.79□□□□□ -0.2
CCDC43-202ENST00000457422 RPL39P5Q59GN2 51 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms