RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 CASC10Q5T4H9 136 aa12.28□□□□□ -0.44
GPC1-206ENST00000455111 RIMS4Q9H426 269 aaPredicted RBP12.28□□□□□ -0.44
GPC1-206ENST00000455111 C12orf4Q9NQ89 552 aa12.28□□□□□ -0.44
GPC1-206ENST00000455111 IGKV1D-8A0A087WSZ0 117 aa12.27□□□□□ -0.45
GPC1-206ENST00000455111 C3orf84H3BNL1 204 aa12.27□□□□□ -0.45
GPC1-206ENST00000455111 IGLV1-51P01701 117 aa12.27□□□□□ -0.45
GPC1-206ENST00000455111 TRBV12-3P01733 135 aa12.27□□□□□ -0.45
GPC1-206ENST00000455111 GSTT2P0CG29 244 aa12.27□□□□□ -0.45
GPC1-206ENST00000455111 GSTT2BP0CG30 244 aa12.27□□□□□ -0.45
GPC1-206ENST00000455111 CPEP16870 476 aa12.27□□□□□ -0.45
GPC1-206ENST00000455111 OR10A3P58181 314 aa12.27□□□□□ -0.45
GPC1-206ENST00000455111 FXYD3Q14802 87 aa12.27□□□□□ -0.45
GPC1-206ENST00000455111 SSX1Q16384 188 aa12.27□□□□□ -0.45
GPC1-206ENST00000455111 HES5Q5TA89 166 aa12.27□□□□□ -0.45
GPC1-206ENST00000455111 NR2C2APQ86WQ0 139 aa12.27□□□□□ -0.45
GPC1-206ENST00000455111 ABHD5Q8WTS1 349 aa12.27□□□□□ -0.45
GPC1-206ENST00000455111 EDARADDQ8WWZ3 215 aa12.27□□□□□ -0.45
GPC1-206ENST00000455111 MAFIPQ8WZ33 124 aa12.27□□□□□ -0.45
GPC1-206ENST00000455111 FAM3DQ96BQ1 224 aa12.27□□□□□ -0.45
GPC1-206ENST00000455111 CMSS1Q9BQ75 279 aaKnown RBP12.27□□□□□ -0.45
GPC1-206ENST00000455111 URM1Q9BTM9 101 aaKnown RBP12.27□□□□□ -0.45
GPC1-206ENST00000455111 PLGRKTQ9HBL7 147 aa12.27□□□□□ -0.45
GPC1-206ENST00000455111 SDHAF2Q9NX18 166 aa12.27□□□□□ -0.45
GPC1-206ENST00000455111 ELF5Q9UKW6 265 aaPredicted RBP12.27□□□□□ -0.45
GPC1-206ENST00000455111 PLECQ15149 4684 aaKnown RBP12.26□□□□□ -0.45
GPC1-206ENST00000455111 A0A0B4J203 849 aa12.26□□□□□ -0.45
GPC1-206ENST00000455111 TRDCB7Z8K6 153 aa12.26□□□□□ -0.45
GPC1-206ENST00000455111 M0R1X1 148 aa12.26□□□□□ -0.45
GPC1-206ENST00000455111 SPDEFO95238 335 aa12.26□□□□□ -0.45
GPC1-206ENST00000455111 TRGV3P03979 118 aa12.26□□□□□ -0.45
GPC1-206ENST00000455111 TFAP2AP05549 437 aa12.26□□□□□ -0.45
GPC1-206ENST00000455111 HSMCR30P0CW71 290 aa12.26□□□□□ -0.45
GPC1-206ENST00000455111 CALRP27797 417 aaKnown RBP12.26□□□□□ -0.45
GPC1-206ENST00000455111 RPS16P62249 146 aaKnown RBP12.26□□□□□ -0.45
GPC1-206ENST00000455111 MLLT11Q13015 90 aaPredicted RBP12.26□□□□□ -0.45
GPC1-206ENST00000455111 RAB11BQ15907 218 aa12.26□□□□□ -0.45
GPC1-206ENST00000455111 PDPNQ86YL7 162 aa12.26□□□□□ -0.45
GPC1-206ENST00000455111 OR5T1Q8NG75 326 aa12.26□□□□□ -0.45
GPC1-206ENST00000455111 GRPEL2Q8TAA5 225 aa12.26□□□□□ -0.45
GPC1-206ENST00000455111 MUC7Q8TAX7 377 aa12.26□□□□□ -0.45
GPC1-206ENST00000455111 THAP7Q9BT49 309 aaPredicted RBP12.26□□□□□ -0.45
GPC1-206ENST00000455111 CABLES2Q9BTV7 478 aa12.26□□□□□ -0.45
GPC1-206ENST00000455111 GHITMQ9H3K2 345 aa12.26□□□□□ -0.45
GPC1-206ENST00000455111 C19orf73Q9NVV2 129 aa12.26□□□□□ -0.45
GPC1-206ENST00000455111 TRBV6-7A0A0A0MS04 114 aa12.25□□□□□ -0.45
GPC1-206ENST00000455111 MFNGO00587 321 aa12.25□□□□□ -0.45
GPC1-206ENST00000455111 HSPA12AO43301 675 aa12.25□□□□□ -0.45
GPC1-206ENST00000455111 FCGR3AP08637 254 aa12.25□□□□□ -0.45
GPC1-206ENST00000455111 OR8U9P0C7N5 309 aa12.25□□□□□ -0.45
GPC1-206ENST00000455111 CRHBPP24387 322 aa12.25□□□□□ -0.45
GPC1-206ENST00000455111 TMEM267Q0VDI3 215 aaPredicted RBP12.25□□□□□ -0.45
GPC1-206ENST00000455111 SRSF7Q16629 238 aaKnown RBP eCLIP12.25□□□□□ -0.45
GPC1-206ENST00000455111 PYHIN1Q6K0P9 492 aa12.25□□□□□ -0.45
GPC1-206ENST00000455111 POC5Q8NA72 575 aa12.25□□□□□ -0.45
GPC1-206ENST00000455111 DDB2Q92466 427 aa12.25□□□□□ -0.45
GPC1-206ENST00000455111 TM2D3Q9BRN9 247 aa12.25□□□□□ -0.45
GPC1-206ENST00000455111 SLC35D1Q9NTN3 355 aa12.25□□□□□ -0.45
GPC1-206ENST00000455111 ZNF230Q9UIE0 474 aaPredicted RBP12.25□□□□□ -0.45
GPC1-206ENST00000455111 RAB27BO00194 218 aa12.24□□□□□ -0.45
GPC1-206ENST00000455111 FABP7O15540 132 aa12.24□□□□□ -0.45
GPC1-206ENST00000455111 DENRO43583 198 aaKnown RBP12.24□□□□□ -0.45
GPC1-206ENST00000455111 RGS10O43665 173 aa12.24□□□□□ -0.45
GPC1-206ENST00000455111 IGHV4-30-4P0DP06 118 aa12.24□□□□□ -0.45
GPC1-206ENST00000455111 PITPNAQ00169 270 aa12.24□□□□□ -0.45
GPC1-206ENST00000455111 DYRK1AQ13627 763 aa12.24□□□□□ -0.45
GPC1-206ENST00000455111 KLF5Q13887 457 aaPredicted RBP12.24□□□□□ -0.45
GPC1-206ENST00000455111 OR6Q1Q8NGQ2 317 aa12.24□□□□□ -0.45
GPC1-206ENST00000455111 FLYWCH2Q96CP2 140 aaKnown RBP12.24□□□□□ -0.45
GPC1-206ENST00000455111 TSNAXQ99598 290 aaKnown RBP12.24□□□□□ -0.45
GPC1-206ENST00000455111 MGLLQ99685 303 aa12.24□□□□□ -0.45
GPC1-206ENST00000455111 OR2D2Q9H210 308 aa12.24□□□□□ -0.45
GPC1-206ENST00000455111 SLA2Q9H6Q3 261 aa12.24□□□□□ -0.45
GPC1-206ENST00000455111 SCN3BQ9NY72 215 aa12.24□□□□□ -0.45
GPC1-206ENST00000455111 V9GY05 133 aa12.24□□□□□ -0.45
GPC1-206ENST00000455111 ANKRD34BA5PLL1 514 aa12.23□□□□□ -0.45
GPC1-206ENST00000455111 LINC00473A8K010 186 aa12.23□□□□□ -0.45
GPC1-206ENST00000455111 APELAP0DMC3 54 aa12.23□□□□□ -0.45
GPC1-206ENST00000455111 GNB3P16520 340 aa12.23□□□□□ -0.45
GPC1-206ENST00000455111 TMEM177Q53S58 311 aa12.23□□□□□ -0.45
GPC1-206ENST00000455111 BVESQ8NE79 360 aa12.23□□□□□ -0.45
GPC1-206ENST00000455111 OR56B1Q8NGI3 324 aa12.23□□□□□ -0.45
GPC1-206ENST00000455111 OR4A4PQ8NGN8 299 aa12.23□□□□□ -0.45
GPC1-206ENST00000455111 EDA2RQ9HAV5 297 aa12.23□□□□□ -0.45
GPC1-206ENST00000455111 ZNF221Q9UK13 617 aa12.23□□□□□ -0.45
GPC1-206ENST00000455111 MGAT4AQ9UM21 535 aa12.23□□□□□ -0.45
GPC1-206ENST00000455111 BIRC6Q9NR09 4857 aa12.23□□□□□ -0.45
GPC1-206ENST00000455111 TNCP24821 2201 aa12.22□□□□□ -0.45
GPC1-206ENST00000455111 IZUMO1RA6ND01 250 aa12.22□□□□□ -0.45
GPC1-206ENST00000455111 A8MZ25 164 aa12.22□□□□□ -0.45
GPC1-206ENST00000455111 BET1O15155 118 aa12.22□□□□□ -0.45
GPC1-206ENST00000455111 ADAMTSL5Q6ZMM2 481 aa12.22□□□□□ -0.45
GPC1-206ENST00000455111 PRSS48Q7RTY5 328 aa12.22□□□□□ -0.45
GPC1-206ENST00000455111 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.22□□□□□ -0.45
GPC1-206ENST00000455111 TPRKBQ9Y3C4 175 aa12.22□□□□□ -0.45
GPC1-206ENST00000455111 H3BUA1 57 aa12.21□□□□□ -0.45
GPC1-206ENST00000455111 ARL6IP5O75915 188 aa12.21□□□□□ -0.45
GPC1-206ENST00000455111 BRI3O95415 125 aa12.21□□□□□ -0.45
GPC1-206ENST00000455111 APOA2P02652 100 aa12.21□□□□□ -0.45
GPC1-206ENST00000455111 CSN3P07498 182 aa12.21□□□□□ -0.45
GPC1-206ENST00000455111 EDN2P20800 178 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms