RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 HES3Q5TGS1 186 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 ASPHD1Q5U4P2 390 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 C1QL3Q5VWW1 255 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 LRRTM1Q86UE6 522 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 RPS19BP1Q86WX3 136 aaKnown RBP6.49□□□□□ -1.37
BRCC3-208ENST00000453705 TMEM86BQ8N661 226 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 DEFB124Q8NES8 71 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 OR52N5Q8NH56 324 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 SYNPRQ8TBG9 265 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 HES7Q9BYE0 225 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 SLC7A10Q9NS82 523 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 PRO0628Q9UI54 55 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 NCKAP5O14513 1909 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 KIF26BQ2KJY2 2108 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 PIN1P1O15428 100 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 GYPBP06028 91 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 MRPL3P09001 348 aaKnown RBP6.49□□□□□ -1.37
BRCC3-208ENST00000453705 PGA4P0DJD7 388 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 PGA3P0DJD8 388 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 GATA1P15976 413 aaPredicted RBP6.49□□□□□ -1.37
BRCC3-208ENST00000453705 TBPP20226 339 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 GALR1P47211 349 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 NANOS3P60323 173 aaKnown RBP6.49□□□□□ -1.37
BRCC3-208ENST00000453705 UBE2NLQ5JXB2 153 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 BCL2L15Q5TBC7 163 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 TCF24Q7RTU0 167 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 LYPD6Q86Y78 171 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 OR6K6Q8NGW6 343 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 GALMQ96C23 342 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 RNF183Q96D59 192 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 CLCC1Q96S66 551 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 FOXC2Q99958 501 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 URM1Q9BTM9 101 aaKnown RBP6.49□□□□□ -1.37
BRCC3-208ENST00000453705 R4GMQ9 66 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 ADARB2-AS1A8MUL3 147 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 MCRIP1C9JLW8 97 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 HMGB3O15347 200 aaKnown RBP6.48□□□□□ -1.37
BRCC3-208ENST00000453705 CCL25O15444 150 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 ZIC3O60481 467 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 UBL3O95164 117 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 CTLA4P16410 223 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 CCL1P22362 96 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 SHC1P29353 583 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 HILS1P60008 231 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 ERVFRD-1P60508 538 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 TGFBR3Q03167 851 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 SSBP1Q04837 148 aaKnown RBP6.48□□□□□ -1.37
BRCC3-208ENST00000453705 LTC4SQ16873 150 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 CNIH2Q6PI25 160 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 SPACA3Q8IXA5 215 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 KIR3DL3Q8N743 410 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 OR4K17Q8NGC6 315 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 OR5AK2Q8NH90 309 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 RPUSD4Q96CM3 377 aaKnown RBP6.48□□□□□ -1.37
BRCC3-208ENST00000453705 SDSLQ96GA7 329 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 SLC25A44Q96H78 314 aaPredicted RBP6.48□□□□□ -1.37
BRCC3-208ENST00000453705 ADGRG7Q96K78 797 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 RNASE7Q9H1E1 156 aaKnown RBP6.48□□□□□ -1.37
BRCC3-208ENST00000453705 TMPRSS5Q9H3S3 457 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 MBNL3Q9NUK0 354 aaKnown RBP6.48□□□□□ -1.37
BRCC3-208ENST00000453705 SIGLEC9Q9Y336 463 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 KLF12Q9Y4X4 402 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 PHF3Q92576 2039 aaKnown RBP6.48□□□□□ -1.37
BRCC3-208ENST00000453705 A0A087WX48 190 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 HMSDA8MTL9 139 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 B5MCH6 92 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 F5H5K5 113 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 C15orf65H3BRN8 121 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 K7EMT4 169 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 EIF4EBP3O60516 100 aaPredicted RBP6.48□□□□□ -1.37
BRCC3-208ENST00000453705 IGLV3-1P01715 115 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 UBBP0CG47 229 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 CXCL2P19875 107 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 BTCP35070 178 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 FOXG1P55316 489 aaPredicted RBP6.48□□□□□ -1.37
BRCC3-208ENST00000453705 RHOBP62745 196 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 SNAI3Q3KNW1 292 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 KRTAP27-1Q3LI81 207 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 LRRC37A5PQ49AS3 106 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 FAM74A1Q5RGS3 127 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 ZNF343Q6P1L6 599 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 SHISA6Q6ZSJ9 500 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 SLC25A48Q6ZT89 311 aaKnown RBP6.48□□□□□ -1.37
BRCC3-208ENST00000453705 APOBEC3DQ96AK3 386 aaPredicted RBP6.48□□□□□ -1.37
BRCC3-208ENST00000453705 MRAP2Q96G30 205 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 GINS3Q9BRX5 216 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 ZNF319Q9P2F9 582 aa6.48□□□□□ -1.37
BRCC3-208ENST00000453705 K7ERU9 68 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 IGHG1P01857 330 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 PAX1P15863 534 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 NFYAP23511 347 aaPredicted RBP6.47□□□□□ -1.37
BRCC3-208ENST00000453705 INPP1P49441 399 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 UBE2E1P51965 193 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 DLX6P56179 175 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 Q0VFX4 171 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 GSG1Q2KHT4 349 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 SCGB2B2Q4G0G5 96 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 SPICQ8N5J4 248 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 OR8G5Q8NG78 346 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 OR2T35Q8NGX2 323 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms