RNA–Protein interactions for RNA: ENST00000453698.5

SNHG11-213, Transcript of small nucleolar RNA host gene 11, human

TSL 5

Gene SNHG11, Length 1,322 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG11-213	ENST00000453698	ST6GALNAC5	Q9BVH7	336 aa		13.74	□□□□□ -0.21
SNHG11-213	ENST00000453698	SPATA2	Q9UM82	520 aa		13.74	□□□□□ -0.21
SNHG11-213	ENST00000453698	WSB1	Q9Y6I7	421 aa		13.74	□□□□□ -0.21
SNHG11-213	ENST00000453698	NUDT19	A8MXV4	375 aa		13.73	□□□□□ -0.21
SNHG11-213	ENST00000453698		G3V318	75 aa		13.73	□□□□□ -0.21
SNHG11-213	ENST00000453698	SPDEF	O95238	335 aa		13.73	□□□□□ -0.21
SNHG11-213	ENST00000453698	IGLV1-40	P01703	118 aa		13.73	□□□□□ -0.21
SNHG11-213	ENST00000453698	APOA2	P02652	100 aa		13.73	□□□□□ -0.21
SNHG11-213	ENST00000453698	CTXN2	P0C2S0	81 aa		13.73	□□□□□ -0.21
SNHG11-213	ENST00000453698	MYCNOS	P40205	109 aa		13.73	□□□□□ -0.21
SNHG11-213	ENST00000453698	GNG2	P59768	71 aa		13.73	□□□□□ -0.21
SNHG11-213	ENST00000453698	CX3CL1	P78423	397 aa		13.73	□□□□□ -0.21
SNHG11-213	ENST00000453698	CROCCP3	Q8IVE0	287 aa		13.73	□□□□□ -0.21
SNHG11-213	ENST00000453698	MINDY2	Q8NBR6	621 aa		13.73	□□□□□ -0.21
SNHG11-213	ENST00000453698	RCC1L	Q96I51	464 aa	Known RBP	13.73	□□□□□ -0.21
SNHG11-213	ENST00000453698	PARP11	Q9NR21	331 aa		13.73	□□□□□ -0.21
SNHG11-213	ENST00000453698	FBXO7	Q9Y3I1	522 aa		13.73	□□□□□ -0.21
SNHG11-213	ENST00000453698	TRAV41	A0A0B4J266	112 aa		13.72	□□□□□ -0.21
SNHG11-213	ENST00000453698	EGR2	P11161	476 aa	Predicted RBP	13.72	□□□□□ -0.21
SNHG11-213	ENST00000453698	RPS19	P39019	145 aa	Known RBP	13.72	□□□□□ -0.21
SNHG11-213	ENST00000453698	KIAA0141	Q14154	515 aa	Predicted RBP	13.72	□□□□□ -0.21
SNHG11-213	ENST00000453698	CNIH2	Q6PI25	160 aa		13.72	□□□□□ -0.21
SNHG11-213	ENST00000453698	TSNAX	Q99598	290 aa	Known RBP	13.72	□□□□□ -0.21
SNHG11-213	ENST00000453698	SLC35D1	Q9NTN3	355 aa		13.72	□□□□□ -0.21
SNHG11-213	ENST00000453698	NUBP2	Q9Y5Y2	271 aa		13.72	□□□□□ -0.21
SNHG11-213	ENST00000453698	TRAV18	A0A075B6X5	111 aa		13.71	□□□□□ -0.21
SNHG11-213	ENST00000453698	DUS4L	O95620	317 aa	Known RBP	13.71	□□□□□ -0.21
SNHG11-213	ENST00000453698	IGLV2-23	P01705	113 aa		13.71	□□□□□ -0.21
SNHG11-213	ENST00000453698	RPS16	P62249	146 aa	Known RBP	13.71	□□□□□ -0.21
SNHG11-213	ENST00000453698	TAGLN	Q01995	201 aa	Known RBP	13.71	□□□□□ -0.21
SNHG11-213	ENST00000453698	FOXB2	Q5VYV0	432 aa		13.71	□□□□□ -0.21
SNHG11-213	ENST00000453698	ZNF562	Q6V9R5	426 aa		13.71	□□□□□ -0.21
SNHG11-213	ENST00000453698	DDB2	Q92466	427 aa		13.71	□□□□□ -0.21
SNHG11-213	ENST00000453698	FLYWCH2	Q96CP2	140 aa	Known RBP	13.71	□□□□□ -0.21
SNHG11-213	ENST00000453698	RAX2	Q96IS3	184 aa		13.71	□□□□□ -0.21
SNHG11-213	ENST00000453698	KLK15	Q9H2R5	256 aa		13.71	□□□□□ -0.21
SNHG11-213	ENST00000453698	METTL1	Q9UBP6	276 aa	Known RBP	13.71	□□□□□ -0.21
SNHG11-213	ENST00000453698	ANXA10	Q9UJ72	324 aa		13.71	□□□□□ -0.21
SNHG11-213	ENST00000453698	CCL24	O00175	119 aa		13.7	□□□□□ -0.22
SNHG11-213	ENST00000453698	HLA-DQB1	P01920	261 aa		13.7	□□□□□ -0.22
SNHG11-213	ENST00000453698	CRYGB	P07316	175 aa		13.7	□□□□□ -0.22
SNHG11-213	ENST00000453698	DUT	P33316	252 aa	Known RBP	13.7	□□□□□ -0.22
SNHG11-213	ENST00000453698	LGALS7	P47929	136 aa		13.7	□□□□□ -0.22
SNHG11-213	ENST00000453698	LSM3	P62310	102 aa	Known RBP	13.7	□□□□□ -0.22
SNHG11-213	ENST00000453698	PLGLA	Q15195	96 aa		13.7	□□□□□ -0.22
SNHG11-213	ENST00000453698	REC114	Q7Z4M0	266 aa		13.7	□□□□□ -0.22
SNHG11-213	ENST00000453698	C4orf3	Q8WVX3	66 aa		13.7	□□□□□ -0.22
SNHG11-213	ENST00000453698	AUNIP	Q9H7T9	357 aa		13.7	□□□□□ -0.22
SNHG11-213	ENST00000453698	DIABLO	Q9NR28	239 aa		13.7	□□□□□ -0.22
SNHG11-213	ENST00000453698	NECAP2	Q9NVZ3	263 aa		13.7	□□□□□ -0.22
SNHG11-213	ENST00000453698	OR2W1	Q9Y3N9	320 aa		13.7	□□□□□ -0.22
SNHG11-213	ENST00000453698	RBM7	Q9Y580	266 aa	Known RBP	13.7	□□□□□ -0.22
SNHG11-213	ENST00000453698	SOX15	O60248	233 aa		13.69	□□□□□ -0.22
SNHG11-213	ENST00000453698	TUSC2	O75896	110 aa		13.69	□□□□□ -0.22
SNHG11-213	ENST00000453698	PRB2	P02812	416 aa	Predicted RBP	13.69	□□□□□ -0.22
SNHG11-213	ENST00000453698	NFYA	P23511	347 aa	Predicted RBP	13.69	□□□□□ -0.22
SNHG11-213	ENST00000453698	TMEM177	Q53S58	311 aa		13.69	□□□□□ -0.22
SNHG11-213	ENST00000453698	ZNF491	Q8N8L2	437 aa		13.69	□□□□□ -0.22
SNHG11-213	ENST00000453698	OR13F1	Q8NGS4	319 aa		13.69	□□□□□ -0.22
SNHG11-213	ENST00000453698	ADTRP	Q96IZ2	230 aa		13.69	□□□□□ -0.22
SNHG11-213	ENST00000453698	UBE2E2	Q96LR5	201 aa		13.69	□□□□□ -0.22
SNHG11-213	ENST00000453698	DUX3	Q96PT4	197 aa		13.69	□□□□□ -0.22
SNHG11-213	ENST00000453698	FUNDC2	Q9BWH2	189 aa		13.69	□□□□□ -0.22
SNHG11-213	ENST00000453698	TPSG1	Q9NRR2	321 aa		13.69	□□□□□ -0.22
SNHG11-213	ENST00000453698	LINC00473	A8K010	186 aa		13.68	□□□□□ -0.22
SNHG11-213	ENST00000453698	SLC25A17	O43808	307 aa		13.68	□□□□□ -0.22
SNHG11-213	ENST00000453698	CA2	P00918	260 aa		13.68	□□□□□ -0.22
SNHG11-213	ENST00000453698	IGLV2-14	P01704	120 aa		13.68	□□□□□ -0.22
SNHG11-213	ENST00000453698	SMIM18	P0DKX4	95 aa		13.68	□□□□□ -0.22
SNHG11-213	ENST00000453698	RRAS	P10301	218 aa		13.68	□□□□□ -0.22
SNHG11-213	ENST00000453698	LUM	P51884	338 aa	Predicted RBP	13.68	□□□□□ -0.22
SNHG11-213	ENST00000453698	SSBP2	P81877	361 aa	Predicted RBP	13.68	□□□□□ -0.22
SNHG11-213	ENST00000453698	DEFB136	Q30KP8	78 aa		13.68	□□□□□ -0.22
SNHG11-213	ENST00000453698	HOGA1	Q86XE5	327 aa		13.68	□□□□□ -0.22
SNHG11-213	ENST00000453698	ZNF645	Q8N7E2	425 aa		13.68	□□□□□ -0.22
SNHG11-213	ENST00000453698	GVQW1	Q8N7I0	195 aa		13.68	□□□□□ -0.22
SNHG11-213	ENST00000453698	TCTEX1D1	Q8N7M0	179 aa		13.68	□□□□□ -0.22
SNHG11-213	ENST00000453698	BVES	Q8NE79	360 aa		13.68	□□□□□ -0.22
SNHG11-213	ENST00000453698	BEST4	Q8NFU0	473 aa		13.68	□□□□□ -0.22
SNHG11-213	ENST00000453698	SLC25A46	Q96AG3	418 aa		13.68	□□□□□ -0.22
SNHG11-213	ENST00000453698	CLCC1	Q96S66	551 aa		13.68	□□□□□ -0.22
SNHG11-213	ENST00000453698	IGKV1D-13	A0A0B4J2D9	117 aa		13.67	□□□□□ -0.22
SNHG11-213	ENST00000453698	SRRM4	A7MD48	611 aa	Known RBP	13.67	□□□□□ -0.22
SNHG11-213	ENST00000453698	XRCC3	O43542	346 aa		13.67	□□□□□ -0.22
SNHG11-213	ENST00000453698	IGKV1-13	P0DP09	117 aa		13.67	□□□□□ -0.22
SNHG11-213	ENST00000453698	RAB9A	P51151	201 aa		13.67	□□□□□ -0.22
SNHG11-213	ENST00000453698	NCS1	P62166	190 aa		13.67	□□□□□ -0.22
SNHG11-213	ENST00000453698	RUNX1	Q01196	453 aa		13.67	□□□□□ -0.22
SNHG11-213	ENST00000453698	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.67	□□□□□ -0.22
SNHG11-213	ENST00000453698	FHL3	Q13643	280 aa		13.67	□□□□□ -0.22
SNHG11-213	ENST00000453698	RTL8B	Q17RB0	113 aa		13.67	□□□□□ -0.22
SNHG11-213	ENST00000453698	ECSCR	Q19T08	205 aa		13.67	□□□□□ -0.22
SNHG11-213	ENST00000453698	AKIRIN2	Q53H80	203 aa		13.67	□□□□□ -0.22
SNHG11-213	ENST00000453698	UBE2NL	Q5JXB2	153 aa		13.67	□□□□□ -0.22
SNHG11-213	ENST00000453698	TMEM65	Q6PI78	240 aa		13.67	□□□□□ -0.22
SNHG11-213	ENST00000453698	PPP1R27	Q86WC6	154 aa		13.67	□□□□□ -0.22
SNHG11-213	ENST00000453698	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.67	□□□□□ -0.22
SNHG11-213	ENST00000453698	FOXA2	Q9Y261	457 aa	Predicted RBP	13.67	□□□□□ -0.22
SNHG11-213	ENST00000453698		A0A1W2PN81	502 aa		13.66	□□□□□ -0.22
SNHG11-213	ENST00000453698		I3L521	148 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms