RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 CD24P25063 80 aa11.67□□□□□ -0.54
TRAPPC12-211ENST00000452495 SRSF2Q01130 221 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-211ENST00000452495 TRIQKQ629K1 86 aa11.67□□□□□ -0.54
TRAPPC12-211ENST00000452495 LPCAT3Q6P1A2 487 aa11.67□□□□□ -0.54
TRAPPC12-211ENST00000452495 CCBE1Q6UXH8 406 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC12-211ENST00000452495 LHFPL1Q86WI0 220 aa11.67□□□□□ -0.54
TRAPPC12-211ENST00000452495 TMEM219Q86XT9 240 aa11.67□□□□□ -0.54
TRAPPC12-211ENST00000452495 PDPNQ86YL7 162 aa11.67□□□□□ -0.54
TRAPPC12-211ENST00000452495 TOMM5Q8N4H5 51 aa11.67□□□□□ -0.54
TRAPPC12-211ENST00000452495 Q8N6K4 173 aa11.67□□□□□ -0.54
TRAPPC12-211ENST00000452495 OR8H1Q8NGG4 311 aa11.67□□□□□ -0.54
TRAPPC12-211ENST00000452495 HSD17B10Q99714 261 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-211ENST00000452495 SLC25A33Q9BSK2 321 aa11.67□□□□□ -0.54
TRAPPC12-211ENST00000452495 NPFFR1Q9GZQ6 430 aa11.67□□□□□ -0.54
TRAPPC12-211ENST00000452495 RANBP3Q9H6Z4 567 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC12-211ENST00000452495 MOB4Q9Y3A3 225 aa11.67□□□□□ -0.54
TRAPPC12-211ENST00000452495 RRASP10301 218 aa11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 DUTP33316 252 aaKnown RBP11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 ECI1P42126 302 aa11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 UCP3P55916 312 aa11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 CBX3Q13185 183 aa11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 EIF4EBP1Q13541 118 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 KLF9Q13886 244 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 KRTAP21-3Q3LHN1 58 aa11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 ZNF66Q6ZN08 573 aa11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 KCTD9Q7L273 389 aa11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 SLC38A6Q8IZM9 456 aa11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 ZNF383Q8NA42 475 aa11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 BVESQ8NE79 360 aa11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 OR4D10Q8NGI6 311 aa11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 TMEM158Q8WZ71 300 aa11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 EAF1Q96JC9 268 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 PRRT1Q99946 306 aa11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 WDR12Q9GZL7 423 aaKnown RBP11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 CCL28Q9NRJ3 127 aa11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 SLC2A8Q9NY64 477 aa11.66□□□□□ -0.54
TRAPPC12-211ENST00000452495 ATRQ13535 2644 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 H7C2Y5 167 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 FGF16O43320 207 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 NDUFA7O95182 113 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 ZNF735P0CB33 412 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 INPP1P49441 399 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 CATR1Q13166 79 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 RTL8BQ17RB0 113 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 KRTAP24-1Q3LI83 254 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 FBLN7Q53RD9 439 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 AADACL3Q5VUY0 350 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 FAAP20Q6NZ36 180 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 GLDNQ6ZMI3 551 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 ZNF818PQ6ZRF7 136 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 DRAXINQ8NBI3 349 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 OR4C13Q8NGP0 309 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 DDB2Q92466 427 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 SDHCQ99643 169 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 RNF5Q99942 180 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 CCDC32Q9BV29 185 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 SLC35D1Q9NTN3 355 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 C1RLQ9NZP8 487 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 PRELID3BQ9Y3B1 194 aa11.65□□□□□ -0.54
TRAPPC12-211ENST00000452495 GPR31O00270 319 aa11.64□□□□□ -0.55
TRAPPC12-211ENST00000452495 HKR1P10072 659 aa11.64□□□□□ -0.55
TRAPPC12-211ENST00000452495 S100GP29377 79 aa11.64□□□□□ -0.55
TRAPPC12-211ENST00000452495 CD40LGP29965 261 aa11.64□□□□□ -0.55
TRAPPC12-211ENST00000452495 GNRHRP30968 328 aa11.64□□□□□ -0.55
TRAPPC12-211ENST00000452495 SCGB2B2Q4G0G5 96 aa11.64□□□□□ -0.55
TRAPPC12-211ENST00000452495 CMTM1Q8IZ96 169 aa11.64□□□□□ -0.55
TRAPPC12-211ENST00000452495 TERB2Q8NHR7 220 aa11.64□□□□□ -0.55
TRAPPC12-211ENST00000452495 ZNF486Q96H40 463 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC12-211ENST00000452495 RSRP1Q9BUV0 290 aa11.64□□□□□ -0.55
TRAPPC12-211ENST00000452495 SCP2D1Q9UJQ7 156 aa11.64□□□□□ -0.55
TRAPPC12-211ENST00000452495 LINC00473A8K010 186 aa11.63□□□□□ -0.55
TRAPPC12-211ENST00000452495 RNF212BA8MTL3 300 aa11.63□□□□□ -0.55
TRAPPC12-211ENST00000452495 SPDEFO95238 335 aa11.63□□□□□ -0.55
TRAPPC12-211ENST00000452495 IL7P13232 177 aa11.63□□□□□ -0.55
TRAPPC12-211ENST00000452495 KIR2DS2P43631 304 aa11.63□□□□□ -0.55
TRAPPC12-211ENST00000452495 PPP5CP53041 499 aa11.63□□□□□ -0.55
TRAPPC12-211ENST00000452495 RAG2P55895 527 aa11.63□□□□□ -0.55
TRAPPC12-211ENST00000452495 HNF4GQ14541 408 aa11.63□□□□□ -0.55
TRAPPC12-211ENST00000452495 ZNF846Q147U1 533 aa11.63□□□□□ -0.55
TRAPPC12-211ENST00000452495 SURF2Q15527 256 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC12-211ENST00000452495 BAK1Q16611 211 aa11.63□□□□□ -0.55
TRAPPC12-211ENST00000452495 ZNF57Q68EA5 555 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC12-211ENST00000452495 C5orf56Q8N8D9 126 aa11.63□□□□□ -0.55
TRAPPC12-211ENST00000452495 OR4F5Q8NH21 305 aa11.63□□□□□ -0.55
TRAPPC12-211ENST00000452495 TCTEX1D2Q8WW35 142 aa11.63□□□□□ -0.55
TRAPPC12-211ENST00000452495 C19orf24Q9BVV8 132 aa11.63□□□□□ -0.55
TRAPPC12-211ENST00000452495 NAP1L6A6NFF2 107 aa11.62□□□□□ -0.55
TRAPPC12-211ENST00000452495 NBR2O15453 112 aa11.62□□□□□ -0.55
TRAPPC12-211ENST00000452495 TSPAN9O75954 239 aa11.62□□□□□ -0.55
TRAPPC12-211ENST00000452495 PGAM2P15259 253 aa11.62□□□□□ -0.55
TRAPPC12-211ENST00000452495 MMDQ15546 238 aa11.62□□□□□ -0.55
TRAPPC12-211ENST00000452495 C11orf88Q6PI97 169 aa11.62□□□□□ -0.55
TRAPPC12-211ENST00000452495 OR51S1Q8NGJ8 323 aa11.62□□□□□ -0.55
TRAPPC12-211ENST00000452495 OR4S2Q8NH73 311 aa11.62□□□□□ -0.55
TRAPPC12-211ENST00000452495 OSR1Q8TAX0 266 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC12-211ENST00000452495 ZFAND1Q8TCF1 268 aa11.62□□□□□ -0.55
TRAPPC12-211ENST00000452495 FLYWCH2Q96CP2 140 aaKnown RBP11.62□□□□□ -0.55
TRAPPC12-211ENST00000452495 TSNAXQ99598 290 aaKnown RBP11.62□□□□□ -0.55
TRAPPC12-211ENST00000452495 C7orf50Q9BRJ6 194 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms