RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 MYCNOSP40205 109 aa10.98□□□□□ -0.65
RTFDC1-204ENST00000449062 TIMM50Q3ZCQ8 353 aa10.98□□□□□ -0.65
RTFDC1-204ENST00000449062 KHDC1LQ5JSQ8 128 aa10.98□□□□□ -0.65
RTFDC1-204ENST00000449062 DDB2Q92466 427 aa10.98□□□□□ -0.65
RTFDC1-204ENST00000449062 RAX2Q96IS3 184 aa10.98□□□□□ -0.65
RTFDC1-204ENST00000449062 AUNIPQ9H7T9 357 aa10.98□□□□□ -0.65
RTFDC1-204ENST00000449062 SPATA2Q9UM82 520 aa10.98□□□□□ -0.65
RTFDC1-204ENST00000449062 TRAV18A0A075B6X5 111 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 A0A0A6YYH2 397 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 A6NJ64 397 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 SRRM4A7MD48 611 aaKnown RBP10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 H7C2Y5 167 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 SOX15O60248 233 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 TUSC2O75896 110 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 IGLV2-14P01704 120 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 HLA-DQB1P01920 261 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 PF4P02776 101 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 CTXN2P0C2S0 81 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 OR5H8P0DN80 308 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 CD33P20138 364 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 VDAC1P21796 283 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 SSBP2P81877 361 aaPredicted RBP10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 MRGPRG-AS1Q2M3A8 158 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 CXorf66Q5JRM2 361 aaPredicted RBP10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 FOXB2Q5VYV0 432 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 CNIH2Q6PI25 160 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 ZNF562Q6V9R5 426 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 PDPNQ86YL7 162 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 RCC1LQ96I51 464 aaKnown RBP10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 OR2D2Q9H210 308 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 KIAA1456Q9P272 454 aa10.97□□□□□ -0.65
RTFDC1-204ENST00000449062 TRAV41A0A0B4J266 112 aa10.96□□□□□ -0.65
RTFDC1-204ENST00000449062 LINC00473A8K010 186 aa10.96□□□□□ -0.65
RTFDC1-204ENST00000449062 CCL24O00175 119 aa10.96□□□□□ -0.65
RTFDC1-204ENST00000449062 DUTP33316 252 aaKnown RBP10.96□□□□□ -0.65
RTFDC1-204ENST00000449062 LGALS7P47929 136 aa10.96□□□□□ -0.65
RTFDC1-204ENST00000449062 RPS16P62249 146 aaKnown RBP10.96□□□□□ -0.65
RTFDC1-204ENST00000449062 TMEM177Q53S58 311 aa10.96□□□□□ -0.65
RTFDC1-204ENST00000449062 CROCCP3Q8IVE0 287 aa10.96□□□□□ -0.65
RTFDC1-204ENST00000449062 ZNF491Q8N8L2 437 aa10.96□□□□□ -0.65
RTFDC1-204ENST00000449062 KLHL30-AS1Q8NEE0 82 aa10.96□□□□□ -0.65
RTFDC1-204ENST00000449062 OR13F1Q8NGS4 319 aa10.96□□□□□ -0.65
RTFDC1-204ENST00000449062 FLYWCH2Q96CP2 140 aaKnown RBP10.96□□□□□ -0.65
RTFDC1-204ENST00000449062 TSNAXQ99598 290 aaKnown RBP10.96□□□□□ -0.65
RTFDC1-204ENST00000449062 GINS4Q9BRT9 223 aa10.96□□□□□ -0.65
RTFDC1-204ENST00000449062 PARP11Q9NR21 331 aa10.96□□□□□ -0.65
RTFDC1-204ENST00000449062 ANXA10Q9UJ72 324 aa10.96□□□□□ -0.65
RTFDC1-204ENST00000449062 OR2W1Q9Y3N9 320 aa10.96□□□□□ -0.65
RTFDC1-204ENST00000449062 IGKV1D-13A0A0B4J2D9 117 aa10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 I3L521 148 aa10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 ARPC1BO15143 372 aaKnown RBP10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 SPDEFO95238 335 aa10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 IGKV1-13P0DP09 117 aa10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 NFYAP23511 347 aaPredicted RBP10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 RAB9AP51151 201 aa10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 GNG2P59768 71 aa10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 LSM3P62310 102 aaKnown RBP10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 RUNX1Q01196 453 aa10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 TAGLNQ01995 201 aaKnown RBP10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 PJVKQ0ZLH3 352 aa10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 EIF4EBP1Q13541 118 aaPredicted RBP10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 AKIRIN2Q53H80 203 aa10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 HOGA1Q86XE5 327 aa10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 GVQW1Q8N7I0 195 aa10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 UBE2E2Q96LR5 201 aa10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 DUX3Q96PT4 197 aa10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 FUNDC2Q9BWH2 189 aa10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 VCX3AQ9NNX9 186 aa10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 TPSG1Q9NRR2 321 aa10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 SLC35D1Q9NTN3 355 aa10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 NECAP2Q9NVZ3 263 aa10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 METTL1Q9UBP6 276 aaKnown RBP10.95□□□□□ -0.66
RTFDC1-204ENST00000449062 NUDT19A8MXV4 375 aa10.94□□□□□ -0.66
RTFDC1-204ENST00000449062 XRCC3O43542 346 aa10.94□□□□□ -0.66
RTFDC1-204ENST00000449062 DUS4LO95620 317 aaKnown RBP10.94□□□□□ -0.66
RTFDC1-204ENST00000449062 APOA2P02652 100 aa10.94□□□□□ -0.66
RTFDC1-204ENST00000449062 SMIM18P0DKX4 95 aa10.94□□□□□ -0.66
RTFDC1-204ENST00000449062 PTHLHP12272 177 aa10.94□□□□□ -0.66
RTFDC1-204ENST00000449062 BRWD1-AS2P59051 145 aa10.94□□□□□ -0.66
RTFDC1-204ENST00000449062 KRTAP10-11P60412 298 aa10.94□□□□□ -0.66
RTFDC1-204ENST00000449062 EGFEM1PQ0D2K5 195 aa10.94□□□□□ -0.66
RTFDC1-204ENST00000449062 FHL3Q13643 280 aa10.94□□□□□ -0.66
RTFDC1-204ENST00000449062 BVESQ8NE79 360 aa10.94□□□□□ -0.66
RTFDC1-204ENST00000449062 C4orf3Q8WVX3 66 aa10.94□□□□□ -0.66
RTFDC1-204ENST00000449062 SLC25A46Q96AG3 418 aa10.94□□□□□ -0.66
RTFDC1-204ENST00000449062 CLCC1Q96S66 551 aa10.94□□□□□ -0.66
RTFDC1-204ENST00000449062 DIABLOQ9NR28 239 aa10.94□□□□□ -0.66
RTFDC1-204ENST00000449062 SLC25A17O43808 307 aa10.93□□□□□ -0.66
RTFDC1-204ENST00000449062 CA2P00918 260 aa10.93□□□□□ -0.66
RTFDC1-204ENST00000449062 LUMP51884 338 aaPredicted RBP10.93□□□□□ -0.66
RTFDC1-204ENST00000449062 RPL30P62888 115 aaKnown RBP10.93□□□□□ -0.66
RTFDC1-204ENST00000449062 DEFB136Q30KP8 78 aa10.93□□□□□ -0.66
RTFDC1-204ENST00000449062 ASPHD1Q5U4P2 390 aa10.93□□□□□ -0.66
RTFDC1-204ENST00000449062 REC114Q7Z4M0 266 aa10.93□□□□□ -0.66
RTFDC1-204ENST00000449062 PPP1R27Q86WC6 154 aa10.93□□□□□ -0.66
RTFDC1-204ENST00000449062 BEST4Q8NFU0 473 aa10.93□□□□□ -0.66
RTFDC1-204ENST00000449062 ADTRPQ96IZ2 230 aa10.93□□□□□ -0.66
RTFDC1-204ENST00000449062 GNB4Q9HAV0 340 aa10.93□□□□□ -0.66
RTFDC1-204ENST00000449062 AURKAIP1Q9NWT8 199 aaPredicted RBP10.93□□□□□ -0.66
RTFDC1-204ENST00000449062 RBMX2Q9Y388 322 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms