RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 RNLSQ5VYX0 342 aa11.88□□□□□ -0.51
TRA2A-203ENST00000448549 PDPNQ86YL7 162 aa11.88□□□□□ -0.51
TRA2A-203ENST00000448549 SGPP2Q8IWX5 399 aa11.88□□□□□ -0.51
TRA2A-203ENST00000448549 ARHGAP5-AS1Q96IT6 56 aa11.88□□□□□ -0.51
TRA2A-203ENST00000448549 GFI1Q99684 422 aa11.88□□□□□ -0.51
TRA2A-203ENST00000448549 EDA2RQ9HAV5 297 aa11.88□□□□□ -0.51
TRA2A-203ENST00000448549 PLGRKTQ9HBL7 147 aa11.88□□□□□ -0.51
TRA2A-203ENST00000448549 RDH8Q9NYR8 311 aa11.88□□□□□ -0.51
TRA2A-203ENST00000448549 HSF4Q9ULV5 492 aa11.88□□□□□ -0.51
TRA2A-203ENST00000448549 LSM2Q9Y333 95 aaKnown RBP11.88□□□□□ -0.51
TRA2A-203ENST00000448549 SORL1Q92673 2214 aa11.88□□□□□ -0.51
TRA2A-203ENST00000448549 A8MZ25 164 aa11.87□□□□□ -0.51
TRA2A-203ENST00000448549 H3BUA1 57 aa11.87□□□□□ -0.51
TRA2A-203ENST00000448549 M0R1X1 148 aa11.87□□□□□ -0.51
TRA2A-203ENST00000448549 VEGFCP49767 419 aa11.87□□□□□ -0.51
TRA2A-203ENST00000448549 KLF5Q13887 457 aaPredicted RBP11.87□□□□□ -0.51
TRA2A-203ENST00000448549 MED22Q15528 200 aa11.87□□□□□ -0.51
TRA2A-203ENST00000448549 LIPKQ5VXJ0 399 aa11.87□□□□□ -0.51
TRA2A-203ENST00000448549 IL34Q6ZMJ4 242 aa11.87□□□□□ -0.51
TRA2A-203ENST00000448549 CMSS1Q9BQ75 279 aaKnown RBP11.87□□□□□ -0.51
TRA2A-203ENST00000448549 PECRQ9BY49 303 aa11.87□□□□□ -0.51
TRA2A-203ENST00000448549 SLC35D1Q9NTN3 355 aa11.87□□□□□ -0.51
TRA2A-203ENST00000448549 AK6Q9Y3D8 172 aaKnown RBP11.87□□□□□ -0.51
TRA2A-203ENST00000448549 DNAH7Q8WXX0 4024 aa11.87□□□□□ -0.51
TRA2A-203ENST00000448549 A0A0G2JLM5 398 aa11.86□□□□□ -0.51
TRA2A-203ENST00000448549 TRDCB7Z8K6 153 aa11.86□□□□□ -0.51
TRA2A-203ENST00000448549 SLC17A2O00624 439 aa11.86□□□□□ -0.51
TRA2A-203ENST00000448549 IGLV2-23P01705 113 aa11.86□□□□□ -0.51
TRA2A-203ENST00000448549 SYNJ2BPP57105 145 aa11.86□□□□□ -0.51
TRA2A-203ENST00000448549 DEFA5Q01523 94 aa11.86□□□□□ -0.51
TRA2A-203ENST00000448549 OGFRL1Q5TC84 451 aaPredicted RBP11.86□□□□□ -0.51
TRA2A-203ENST00000448549 OR9G4Q8NGQ1 327 aa11.86□□□□□ -0.51
TRA2A-203ENST00000448549 ISOC1Q96CN7 298 aa11.86□□□□□ -0.51
TRA2A-203ENST00000448549 CRYGBP07316 175 aa11.85□□□□□ -0.51
TRA2A-203ENST00000448549 CD3GP09693 182 aa11.85□□□□□ -0.51
TRA2A-203ENST00000448549 LGALS7P47929 136 aa11.85□□□□□ -0.51
TRA2A-203ENST00000448549 CLDN12P56749 244 aa11.85□□□□□ -0.51
TRA2A-203ENST00000448549 RAB11BQ15907 218 aa11.85□□□□□ -0.51
TRA2A-203ENST00000448549 MOGAT2Q3SYC2 334 aa11.85□□□□□ -0.51
TRA2A-203ENST00000448549 PLAC9Q5JTB6 97 aa11.85□□□□□ -0.51
TRA2A-203ENST00000448549 TMEM91Q6ZNR0 172 aa11.85□□□□□ -0.51
TRA2A-203ENST00000448549 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.85□□□□□ -0.51
TRA2A-203ENST00000448549 UFD1Q92890 307 aa11.85□□□□□ -0.51
TRA2A-203ENST00000448549 ADAM30Q9UKF2 790 aa11.85□□□□□ -0.51
TRA2A-203ENST00000448549 H0Y980 276 aa11.84□□□□□ -0.51
TRA2A-203ENST00000448549 TRBV12-3P01733 135 aa11.84□□□□□ -0.51
TRA2A-203ENST00000448549 HAGHQ16775 308 aa11.84□□□□□ -0.51
TRA2A-203ENST00000448549 OR4A4PQ8NGN8 299 aa11.84□□□□□ -0.51
TRA2A-203ENST00000448549 HARBI1Q96MB7 349 aa11.84□□□□□ -0.51
TRA2A-203ENST00000448549 TMEM68Q96MH6 324 aa11.84□□□□□ -0.51
TRA2A-203ENST00000448549 SPATA25Q9BR10 227 aa11.84□□□□□ -0.51
TRA2A-203ENST00000448549 TINAGL1Q9GZM7 467 aaPredicted RBP11.84□□□□□ -0.51
TRA2A-203ENST00000448549 OR2D2Q9H210 308 aa11.84□□□□□ -0.51
TRA2A-203ENST00000448549 SDHAF2Q9NX18 166 aa11.84□□□□□ -0.51
TRA2A-203ENST00000448549 PEF1Q9UBV8 284 aaKnown RBP11.84□□□□□ -0.51
TRA2A-203ENST00000448549 SRRM4A7MD48 611 aaKnown RBP11.83□□□□□ -0.52
TRA2A-203ENST00000448549 CASQ2O14958 399 aaPredicted RBP11.83□□□□□ -0.52
TRA2A-203ENST00000448549 BET1O15155 118 aa11.83□□□□□ -0.52
TRA2A-203ENST00000448549 FABP7O15540 132 aa11.83□□□□□ -0.52
TRA2A-203ENST00000448549 BRI3O95415 125 aa11.83□□□□□ -0.52
TRA2A-203ENST00000448549 HSMCR30P0CW71 290 aa11.83□□□□□ -0.52
TRA2A-203ENST00000448549 APELAP0DMC3 54 aa11.83□□□□□ -0.52
TRA2A-203ENST00000448549 AADACP22760 399 aa11.83□□□□□ -0.52
TRA2A-203ENST00000448549 SERPINB10P48595 397 aa11.83□□□□□ -0.52
TRA2A-203ENST00000448549 RPS25P62851 125 aaKnown RBP11.83□□□□□ -0.52
TRA2A-203ENST00000448549 IRF3Q14653 427 aa11.83□□□□□ -0.52
TRA2A-203ENST00000448549 C2orf76Q3KRA6 126 aa11.83□□□□□ -0.52
TRA2A-203ENST00000448549 IGSF11Q5DX21 431 aa11.83□□□□□ -0.52
TRA2A-203ENST00000448549 ZNF343Q6P1L6 599 aa11.83□□□□□ -0.52
TRA2A-203ENST00000448549 ADAMTSL5Q6ZMM2 481 aa11.83□□□□□ -0.52
TRA2A-203ENST00000448549 BVESQ8NE79 360 aa11.83□□□□□ -0.52
TRA2A-203ENST00000448549 OR56B1Q8NGI3 324 aa11.83□□□□□ -0.52
TRA2A-203ENST00000448549 FAM3DQ96BQ1 224 aa11.83□□□□□ -0.52
TRA2A-203ENST00000448549 SCN3BQ9NY72 215 aa11.83□□□□□ -0.52
TRA2A-203ENST00000448549 COA4Q9NYJ1 87 aa11.83□□□□□ -0.52
TRA2A-203ENST00000448549 KCNK7Q9Y2U2 307 aa11.83□□□□□ -0.52
TRA2A-203ENST00000448549 MSGN1A6NI15 193 aa11.82□□□□□ -0.52
TRA2A-203ENST00000448549 SHOXO15266 292 aa11.82□□□□□ -0.52
TRA2A-203ENST00000448549 DENRO43583 198 aaKnown RBP11.82□□□□□ -0.52
TRA2A-203ENST00000448549 RBMXL2O75526 392 aaKnown RBP11.82□□□□□ -0.52
TRA2A-203ENST00000448549 ARL6IP5O75915 188 aa11.82□□□□□ -0.52
TRA2A-203ENST00000448549 CSN3P07498 182 aa11.82□□□□□ -0.52
TRA2A-203ENST00000448549 GSTT2P0CG29 244 aa11.82□□□□□ -0.52
TRA2A-203ENST00000448549 GSTT2BP0CG30 244 aa11.82□□□□□ -0.52
TRA2A-203ENST00000448549 MRPS15P82914 257 aaKnown RBP11.82□□□□□ -0.52
TRA2A-203ENST00000448549 PLA2G7Q13093 441 aa11.82□□□□□ -0.52
TRA2A-203ENST00000448549 DYRK1AQ13627 763 aa11.82□□□□□ -0.52
TRA2A-203ENST00000448549 TPBGQ13641 420 aa11.82□□□□□ -0.52
TRA2A-203ENST00000448549 TATDN3Q17R31 274 aa11.82□□□□□ -0.52
TRA2A-203ENST00000448549 TMEM177Q53S58 311 aa11.82□□□□□ -0.52
TRA2A-203ENST00000448549 GTSCR1Q86UQ5 136 aa11.82□□□□□ -0.52
TRA2A-203ENST00000448549 OR10J5Q8NHC4 309 aa11.82□□□□□ -0.52
TRA2A-203ENST00000448549 C5orf30Q96GV9 206 aa11.82□□□□□ -0.52
TRA2A-203ENST00000448549 THAP7Q9BT49 309 aaPredicted RBP11.82□□□□□ -0.52
TRA2A-203ENST00000448549 TUBA4BQ9H853 241 aa11.82□□□□□ -0.52
TRA2A-203ENST00000448549 SACSQ9NZJ4 4579 aa11.82□□□□□ -0.52
TRA2A-203ENST00000448549 TRBV6-7A0A0A0MS04 114 aa11.81□□□□□ -0.52
TRA2A-203ENST00000448549 IZUMO1RA6ND01 250 aa11.81□□□□□ -0.52
TRA2A-203ENST00000448549 CALRP27797 417 aaKnown RBP11.81□□□□□ -0.52
TRA2A-203ENST00000448549 CBX3Q13185 183 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms