RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 KCTD9Q7L273 389 aa14.46□□□□□ -0.09
TRAPPC4-203ENST00000447216 OR51H1Q8NH63 302 aa14.46□□□□□ -0.09
TRAPPC4-203ENST00000447216 CAPSLQ8WWF8 208 aa14.46□□□□□ -0.09
TRAPPC4-203ENST00000447216 SLC25A21Q9BQT8 299 aaPredicted RBP14.46□□□□□ -0.09
TRAPPC4-203ENST00000447216 DPAGT1Q9H3H5 408 aa14.46□□□□□ -0.09
TRAPPC4-203ENST00000447216 PALMDQ9NP74 551 aa14.46□□□□□ -0.09
TRAPPC4-203ENST00000447216 SLC2A9Q9NRM0 540 aa14.46□□□□□ -0.09
TRAPPC4-203ENST00000447216 TNFRSF19Q9NS68 423 aa14.46□□□□□ -0.09
TRAPPC4-203ENST00000447216 H0YJW9 148 aa14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 H3BUX3 64 aa14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 IGHV4-59P01825 116 aa14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 SNRNP70P08621 437 aaKnown RBP14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 FAM157CP0CG43 387 aa14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 ARHGDIBP52566 201 aa14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 SCGB2A2Q13296 93 aa14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 Q6YL49 198 aa14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 ZNF66Q6ZN08 573 aa14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 TMED4Q7Z7H5 227 aa14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 TBC1D26Q86UD7 250 aa14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 CMTM1Q8IZ96 169 aa14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 ZDHHC22Q8N966 263 aa14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 ENKURQ8TC29 256 aa14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 PIFOQ8TCI5 191 aa14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 ZNF486Q96H40 463 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 SCGB3A2Q96PL1 93 aa14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 HSD17B10Q99714 261 aaKnown RBP14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 PRDM13Q9H4Q3 707 aa14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 SLC35D1Q9NTN3 355 aa14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 COPZ2Q9P299 210 aa14.45□□□□□ -0.1
TRAPPC4-203ENST00000447216 VGLL3A8MV65 326 aa14.44□□□□□ -0.1
TRAPPC4-203ENST00000447216 ARPC1BO15143 372 aaKnown RBP14.44□□□□□ -0.1
TRAPPC4-203ENST00000447216 VENTXO95231 258 aa14.44□□□□□ -0.1
TRAPPC4-203ENST00000447216 TCRBP04435 133 aa14.44□□□□□ -0.1
TRAPPC4-203ENST00000447216 SPNP16150 400 aa14.44□□□□□ -0.1
TRAPPC4-203ENST00000447216 BRS3P32247 399 aa14.44□□□□□ -0.1
TRAPPC4-203ENST00000447216 RND3P61587 244 aa14.44□□□□□ -0.1
TRAPPC4-203ENST00000447216 HABP2Q14520 560 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC4-203ENST00000447216 LY6EQ16553 131 aa14.44□□□□□ -0.1
TRAPPC4-203ENST00000447216 NRARPQ7Z6K4 114 aa14.44□□□□□ -0.1
TRAPPC4-203ENST00000447216 OR5AN1Q8NGI8 311 aa14.44□□□□□ -0.1
TRAPPC4-203ENST00000447216 DDB2Q92466 427 aa14.44□□□□□ -0.1
TRAPPC4-203ENST00000447216 TMEM230Q96A57 120 aa14.44□□□□□ -0.1
TRAPPC4-203ENST00000447216 ADTRPQ96IZ2 230 aa14.44□□□□□ -0.1
TRAPPC4-203ENST00000447216 TRAV6A0A075B6T7 132 aa14.43□□□□□ -0.1
TRAPPC4-203ENST00000447216 H7C2Y5 167 aa14.43□□□□□ -0.1
TRAPPC4-203ENST00000447216 HOXA3O43365 443 aaPredicted RBP14.43□□□□□ -0.1
TRAPPC4-203ENST00000447216 FCGR3BO75015 233 aa14.43□□□□□ -0.1
TRAPPC4-203ENST00000447216 IGKV1D-33P01593 117 aa14.43□□□□□ -0.1
TRAPPC4-203ENST00000447216 IGKV1-33P01594 117 aa14.43□□□□□ -0.1
TRAPPC4-203ENST00000447216 APOA2P02652 100 aa14.43□□□□□ -0.1
TRAPPC4-203ENST00000447216 AKR1C4P17516 323 aa14.43□□□□□ -0.1
TRAPPC4-203ENST00000447216 CD1BP29016 333 aa14.43□□□□□ -0.1
TRAPPC4-203ENST00000447216 S100GP29377 79 aa14.43□□□□□ -0.1
TRAPPC4-203ENST00000447216 IER3P46695 156 aa14.43□□□□□ -0.1
TRAPPC4-203ENST00000447216 DYNLT3P51808 116 aa14.43□□□□□ -0.1
TRAPPC4-203ENST00000447216 HES1Q14469 280 aa14.43□□□□□ -0.1
TRAPPC4-203ENST00000447216 HNF4GQ14541 408 aa14.43□□□□□ -0.1
TRAPPC4-203ENST00000447216 CCDC71LQ8N9Z2 235 aa14.43□□□□□ -0.1
TRAPPC4-203ENST00000447216 DUX5Q96PT3 197 aa14.43□□□□□ -0.1
TRAPPC4-203ENST00000447216 C20orf85Q9H1P6 137 aa14.43□□□□□ -0.1
TRAPPC4-203ENST00000447216 FAM90A9PA6NNJ1 464 aa14.42□□□□□ -0.1
TRAPPC4-203ENST00000447216 MPPED1O15442 326 aa14.42□□□□□ -0.1
TRAPPC4-203ENST00000447216 BRWD1-AS2P59051 145 aa14.42□□□□□ -0.1
TRAPPC4-203ENST00000447216 CATR1Q13166 79 aa14.42□□□□□ -0.1
TRAPPC4-203ENST00000447216 RBMS3Q6XE24 437 aaKnown RBP14.42□□□□□ -0.1
TRAPPC4-203ENST00000447216 TMEM219Q86XT9 240 aa14.42□□□□□ -0.1
TRAPPC4-203ENST00000447216 CENPSQ8N2Z9 138 aa14.42□□□□□ -0.1
TRAPPC4-203ENST00000447216 BEX1Q9HBH7 125 aa14.42□□□□□ -0.1
TRAPPC4-203ENST00000447216 NUDT15Q9NV35 164 aa14.42□□□□□ -0.1
TRAPPC4-203ENST00000447216 PRELID3BQ9Y3B1 194 aa14.42□□□□□ -0.1
TRAPPC4-203ENST00000447216 WASHC3Q9Y3C0 194 aa14.42□□□□□ -0.1
TRAPPC4-203ENST00000447216 PLXNB1O43157 2135 aa14.42□□□□□ -0.1
TRAPPC4-203ENST00000447216 NIPBLQ6KC79 2804 aaeCLIP14.41□□□□□ -0.1
TRAPPC4-203ENST00000447216 TEX13DA0A0J9YY54 714 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC4-203ENST00000447216 CRYM-AS1A6NIL9 109 aa14.41□□□□□ -0.1
TRAPPC4-203ENST00000447216 RNF212BA8MTL3 300 aa14.41□□□□□ -0.1
TRAPPC4-203ENST00000447216 IGKV1-16P04430 117 aa14.41□□□□□ -0.1
TRAPPC4-203ENST00000447216 ANXA7P20073 488 aaKnown RBP14.41□□□□□ -0.1
TRAPPC4-203ENST00000447216 F2RP25116 425 aa14.41□□□□□ -0.1
TRAPPC4-203ENST00000447216 RAB25P57735 213 aa14.41□□□□□ -0.1
TRAPPC4-203ENST00000447216 AANATQ16613 207 aa14.41□□□□□ -0.1
TRAPPC4-203ENST00000447216 SPAG16Q8N0X2 631 aa14.41□□□□□ -0.1
TRAPPC4-203ENST00000447216 ZNF418Q8TF45 676 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC4-203ENST00000447216 SSMEM1Q8WWF3 244 aa14.41□□□□□ -0.1
TRAPPC4-203ENST00000447216 EAF1Q96JC9 268 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC4-203ENST00000447216 RITA1Q96K30 269 aa14.41□□□□□ -0.1
TRAPPC4-203ENST00000447216 ESM1Q9NQ30 184 aa14.41□□□□□ -0.1
TRAPPC4-203ENST00000447216 DNAJC9-AS1A6NH13 148 aa14.4□□□□□ -0.1
TRAPPC4-203ENST00000447216 RAMP3O60896 148 aa14.4□□□□□ -0.1
TRAPPC4-203ENST00000447216 PEX14O75381 377 aa14.4□□□□□ -0.1
TRAPPC4-203ENST00000447216 CRYZL1O95825 349 aa14.4□□□□□ -0.1
TRAPPC4-203ENST00000447216 H2AFB2P0C5Z0 115 aa14.4□□□□□ -0.1
TRAPPC4-203ENST00000447216 TMEM11P17152 192 aa14.4□□□□□ -0.1
TRAPPC4-203ENST00000447216 MC5RP33032 325 aa14.4□□□□□ -0.1
TRAPPC4-203ENST00000447216 RTL8BQ17RB0 113 aa14.4□□□□□ -0.1
TRAPPC4-203ENST00000447216 SP6Q3SY56 376 aa14.4□□□□□ -0.1
TRAPPC4-203ENST00000447216 CCBE1Q6UXH8 406 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC4-203ENST00000447216 PDPNQ86YL7 162 aa14.4□□□□□ -0.1
TRAPPC4-203ENST00000447216 DUSP18Q8NEJ0 188 aa14.4□□□□□ -0.1
TRAPPC4-203ENST00000447216 OR2T10Q8NGZ9 312 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms