RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 PSENENQ9NZ42 101 aa14.41□□□□□ -0.1
SMC6-206ENST00000446852 COQ3Q9NZJ6 369 aa14.41□□□□□ -0.1
SMC6-206ENST00000446852 CACFD1Q9UGQ2 172 aa14.41□□□□□ -0.1
SMC6-206ENST00000446852 HRNRQ86YZ3 2850 aaPredicted RBP14.41□□□□□ -0.1
SMC6-206ENST00000446852 FAM90A26D6RGX4 464 aa14.41□□□□□ -0.1
SMC6-206ENST00000446852 CD3EP07766 207 aa14.41□□□□□ -0.1
SMC6-206ENST00000446852 F2RL1P55085 397 aa14.41□□□□□ -0.1
SMC6-206ENST00000446852 UBE2KP61086 200 aa14.41□□□□□ -0.1
SMC6-206ENST00000446852 TNFRSF9Q07011 255 aa14.41□□□□□ -0.1
SMC6-206ENST00000446852 CT45A1Q5HYN5 189 aa14.41□□□□□ -0.1
SMC6-206ENST00000446852 CT45A3Q8NHU0 189 aa14.41□□□□□ -0.1
SMC6-206ENST00000446852 CCL17Q92583 94 aa14.41□□□□□ -0.1
SMC6-206ENST00000446852 ABHD14AQ9BUJ0 271 aa14.41□□□□□ -0.1
SMC6-206ENST00000446852 DYNLRB1Q9NP97 96 aa14.41□□□□□ -0.1
SMC6-206ENST00000446852 HSPB7Q9UBY9 170 aa14.41□□□□□ -0.1
SMC6-206ENST00000446852 M0R1X1 148 aa14.4□□□□□ -0.1
SMC6-206ENST00000446852 SIAH2O43255 324 aa14.4□□□□□ -0.1
SMC6-206ENST00000446852 MMP23AO75900 390 aa14.4□□□□□ -0.1
SMC6-206ENST00000446852 TMEM182Q6ZP80 229 aaPredicted RBP14.4□□□□□ -0.1
SMC6-206ENST00000446852 ATP5SQ99766 215 aa14.4□□□□□ -0.1
SMC6-206ENST00000446852 RBKSQ9H477 322 aa14.4□□□□□ -0.1
SMC6-206ENST00000446852 FAM96BQ9Y3D0 163 aa14.4□□□□□ -0.1
SMC6-206ENST00000446852 CACNA1AO00555 2505 aa14.4□□□□□ -0.1
SMC6-206ENST00000446852 TRAV38-1A0A0B4J264 116 aa14.4□□□□□ -0.1
SMC6-206ENST00000446852 TMEM218A2RU14 115 aa14.4□□□□□ -0.1
SMC6-206ENST00000446852 NKX6-3A6NJ46 265 aa14.4□□□□□ -0.1
SMC6-206ENST00000446852 MARCH11A6NNE9 402 aa14.4□□□□□ -0.1
SMC6-206ENST00000446852 METTL15P1P0C7V9 234 aa14.4□□□□□ -0.1
SMC6-206ENST00000446852 ADCYAP1P18509 176 aa14.4□□□□□ -0.1
SMC6-206ENST00000446852 ARHGDIBP52566 201 aa14.4□□□□□ -0.1
SMC6-206ENST00000446852 ARL16Q0P5N6 197 aa14.4□□□□□ -0.1
SMC6-206ENST00000446852 HAPLN4Q86UW8 402 aa14.4□□□□□ -0.1
SMC6-206ENST00000446852 TMEM106BQ9NUM4 274 aa14.4□□□□□ -0.1
SMC6-206ENST00000446852 TMA7Q9Y2S6 64 aaKnown RBP14.4□□□□□ -0.1
SMC6-206ENST00000446852 PPIAL4EA0A075B759 164 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 MED19A0JLT2 244 aaPredicted RBP14.39□□□□□ -0.11
SMC6-206ENST00000446852 PPIAL4DF5H284 164 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 AGPAT2O15120 278 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 FCGR3BO75015 233 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 ATG12O94817 140 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 PPIAL4FP0DN26 164 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 NDUFB7P17568 137 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 APOBEC3AP31941 199 aaPredicted RBP14.39□□□□□ -0.11
SMC6-206ENST00000446852 RUNX1Q01196 453 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 CORO2AQ92828 525 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 TSNAXQ99598 290 aaKnown RBP14.39□□□□□ -0.11
SMC6-206ENST00000446852 LINC00574Q9H8X3 128 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 NDRG3Q9UGV2 375 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 PPIAL4AQ9Y536 164 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 ABCA4P78363 2273 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 ZNF729A6NN14 1252 aaPredicted RBP14.39□□□□□ -0.11
SMC6-206ENST00000446852 ITGB1BP1O14713 200 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 RAB29O14966 203 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 NFYBP25208 207 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 TAS2R30P59541 319 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 ZNF616Q08AN1 781 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 LY6DQ14210 128 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 ATRAIDQ6UW56 229 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 H2BFWTQ7Z2G1 175 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 C1orf87Q8N0U7 546 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 ZNF439Q8NDP4 499 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 RAB9BQ9NP90 201 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.39□□□□□ -0.11
SMC6-206ENST00000446852 SLC25A10Q9UBX3 287 aaPredicted RBP14.39□□□□□ -0.11
SMC6-206ENST00000446852 LAMP3Q9UQV4 416 aa14.39□□□□□ -0.11
SMC6-206ENST00000446852 CAMLGP49069 296 aa14.38□□□□□ -0.11
SMC6-206ENST00000446852 EFNB3Q15768 340 aa14.38□□□□□ -0.11
SMC6-206ENST00000446852 OR2G3Q8NGZ4 309 aa14.38□□□□□ -0.11
SMC6-206ENST00000446852 CD300LFQ8TDQ1 290 aa14.38□□□□□ -0.11
SMC6-206ENST00000446852 R3HDM4Q96D70 268 aa14.38□□□□□ -0.11
SMC6-206ENST00000446852 C19orf12Q9NSK7 152 aa14.38□□□□□ -0.11
SMC6-206ENST00000446852 IDI2-AS1Q9NZ38 188 aa14.38□□□□□ -0.11
SMC6-206ENST00000446852 TET2Q6N021 2002 aaPredicted RBP14.38□□□□□ -0.11
SMC6-206ENST00000446852 TPRP12270 2363 aaKnown RBP14.38□□□□□ -0.11
SMC6-206ENST00000446852 SAA2-SAA4A0A096LPE2 208 aa14.38□□□□□ -0.11
SMC6-206ENST00000446852 PRH1P02810 166 aa14.38□□□□□ -0.11
SMC6-206ENST00000446852 SAA2P0DJI9 122 aaPredicted RBP14.38□□□□□ -0.11
SMC6-206ENST00000446852 RAB5CP51148 216 aa14.38□□□□□ -0.11
SMC6-206ENST00000446852 RAB7AP51149 207 aa14.38□□□□□ -0.11
SMC6-206ENST00000446852 ZNF273Q14593 569 aa14.38□□□□□ -0.11
SMC6-206ENST00000446852 SPANXN5Q5MJ07 72 aa14.38□□□□□ -0.11
SMC6-206ENST00000446852 PRAMEF5Q5TYX0 476 aa14.38□□□□□ -0.11
SMC6-206ENST00000446852 ZCCHC14Q8WYQ9 949 aaKnown RBP14.38□□□□□ -0.11
SMC6-206ENST00000446852 MS4A5Q9H3V2 200 aa14.38□□□□□ -0.11
SMC6-206ENST00000446852 ERVFRD-1P60508 538 aa14.37□□□□□ -0.11
SMC6-206ENST00000446852 LYPD2Q6UXB3 125 aa14.37□□□□□ -0.11
SMC6-206ENST00000446852 ZNF251Q9BRH9 671 aa14.37□□□□□ -0.11
SMC6-206ENST00000446852 TREM1Q9NP99 234 aa14.37□□□□□ -0.11
SMC6-206ENST00000446852 CISD1Q9NZ45 108 aaKnown RBP14.37□□□□□ -0.11
SMC6-206ENST00000446852 LINC00312Q9Y6C7 94 aa14.37□□□□□ -0.11
SMC6-206ENST00000446852 HIVEP3Q5T1R4 2406 aa14.37□□□□□ -0.11
SMC6-206ENST00000446852 TNFRSF13BO14836 293 aaPredicted RBP14.37□□□□□ -0.11
SMC6-206ENST00000446852 UNQ6494/PRO21346Q6UXR6 183 aa14.37□□□□□ -0.11
SMC6-206ENST00000446852 DDB2Q92466 427 aa14.37□□□□□ -0.11
SMC6-206ENST00000446852 PRORYQ9H606 182 aa14.37□□□□□ -0.11
SMC6-206ENST00000446852 UQCC1Q9NVA1 299 aa14.37□□□□□ -0.11
SMC6-206ENST00000446852 STRAPQ9Y3F4 350 aaKnown RBP14.37□□□□□ -0.11
SMC6-206ENST00000446852 hADV38S2A0JD32 116 aa14.36□□□□□ -0.11
SMC6-206ENST00000446852 B9A039 149 aa14.36□□□□□ -0.11
SMC6-206ENST00000446852 DLL1O00548 723 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms