RNA–Protein interactions for RNA: ENST00000445388.5

SEC22C-208, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-208ENST00000445388 KLK15Q9H2R5 256 aa11.97□□□□□ -0.49
SEC22C-208ENST00000445388 SLC35D1Q9NTN3 355 aa11.97□□□□□ -0.49
SEC22C-208ENST00000445388 METTL1Q9UBP6 276 aaKnown RBP11.97□□□□□ -0.49
SEC22C-208ENST00000445388 ZNF580Q9UK33 172 aa11.97□□□□□ -0.49
SEC22C-208ENST00000445388 SPATA2Q9UM82 520 aa11.97□□□□□ -0.49
SEC22C-208ENST00000445388 TRAV41A0A0B4J266 112 aa11.96□□□□□ -0.49
SEC22C-208ENST00000445388 APOA2P02652 100 aa11.96□□□□□ -0.49
SEC22C-208ENST00000445388 FCER2P06734 321 aa11.96□□□□□ -0.49
SEC22C-208ENST00000445388 EGR2P11161 476 aaPredicted RBP11.96□□□□□ -0.49
SEC22C-208ENST00000445388 NFYAP23511 347 aaPredicted RBP11.96□□□□□ -0.49
SEC22C-208ENST00000445388 PSMB8P28062 276 aa11.96□□□□□ -0.49
SEC22C-208ENST00000445388 DEFB136Q30KP8 78 aa11.96□□□□□ -0.49
SEC22C-208ENST00000445388 FOXB2Q5VYV0 432 aa11.96□□□□□ -0.49
SEC22C-208ENST00000445388 PDPNQ86YL7 162 aa11.96□□□□□ -0.49
SEC22C-208ENST00000445388 GVQW1Q8N7I0 195 aa11.96□□□□□ -0.49
SEC22C-208ENST00000445388 BVESQ8NE79 360 aa11.96□□□□□ -0.49
SEC22C-208ENST00000445388 FLYWCH2Q96CP2 140 aaKnown RBP11.96□□□□□ -0.49
SEC22C-208ENST00000445388 RAX2Q96IS3 184 aa11.96□□□□□ -0.49
SEC22C-208ENST00000445388 FUNDC2Q9BWH2 189 aa11.96□□□□□ -0.49
SEC22C-208ENST00000445388 TPSG1Q9NRR2 321 aa11.96□□□□□ -0.49
SEC22C-208ENST00000445388 NOTCH1P46531 2555 aa11.96□□□□□ -0.5
SEC22C-208ENST00000445388 OR5H8P0DN80 308 aa11.95□□□□□ -0.5
SEC22C-208ENST00000445388 MYCNOSP40205 109 aa11.95□□□□□ -0.5
SEC22C-208ENST00000445388 CDX1P47902 265 aaPredicted RBP11.95□□□□□ -0.5
SEC22C-208ENST00000445388 NCS1P62166 190 aa11.95□□□□□ -0.5
SEC22C-208ENST00000445388 KIAA0141Q14154 515 aaPredicted RBP11.95□□□□□ -0.5
SEC22C-208ENST00000445388 ECSCRQ19T08 205 aa11.95□□□□□ -0.5
SEC22C-208ENST00000445388 ZNF660Q6AZW8 331 aaPredicted RBP11.95□□□□□ -0.5
SEC22C-208ENST00000445388 CNIH2Q6PI25 160 aa11.95□□□□□ -0.5
SEC22C-208ENST00000445388 P2RX4Q99571 388 aa11.95□□□□□ -0.5
SEC22C-208ENST00000445388 TSNAXQ99598 290 aaKnown RBP11.95□□□□□ -0.5
SEC22C-208ENST00000445388 FAM103A1Q9BTL3 118 aaKnown RBP11.95□□□□□ -0.5
SEC22C-208ENST00000445388 AUNIPQ9H7T9 357 aa11.95□□□□□ -0.5
SEC22C-208ENST00000445388 DIABLOQ9NR28 239 aa11.95□□□□□ -0.5
SEC22C-208ENST00000445388 ANXA10Q9UJ72 324 aa11.95□□□□□ -0.5
SEC22C-208ENST00000445388 A3GALT2U3KPV4 340 aa11.95□□□□□ -0.5
SEC22C-208ENST00000445388 IGKV1D-13A0A0B4J2D9 117 aa11.94□□□□□ -0.5
SEC22C-208ENST00000445388 LINC00473A8K010 186 aa11.94□□□□□ -0.5
SEC22C-208ENST00000445388 CCL24O00175 119 aa11.94□□□□□ -0.5
SEC22C-208ENST00000445388 SLC25A17O43808 307 aa11.94□□□□□ -0.5
SEC22C-208ENST00000445388 SOX15O60248 233 aa11.94□□□□□ -0.5
SEC22C-208ENST00000445388 CA2P00918 260 aa11.94□□□□□ -0.5
SEC22C-208ENST00000445388 IGLV1-40P01703 118 aa11.94□□□□□ -0.5
SEC22C-208ENST00000445388 IGLV2-23P01705 113 aa11.94□□□□□ -0.5
SEC22C-208ENST00000445388 CTXN2P0C2S0 81 aa11.94□□□□□ -0.5
SEC22C-208ENST00000445388 SMIM18P0DKX4 95 aa11.94□□□□□ -0.5
SEC22C-208ENST00000445388 IGKV1-13P0DP09 117 aa11.94□□□□□ -0.5
SEC22C-208ENST00000445388 DUTP33316 252 aaKnown RBP11.94□□□□□ -0.5
SEC22C-208ENST00000445388 VBP1P61758 197 aa11.94□□□□□ -0.5
SEC22C-208ENST00000445388 C19orf54Q5BKX5 351 aa11.94□□□□□ -0.5
SEC22C-208ENST00000445388 MINDY2Q8NBR6 621 aa11.94□□□□□ -0.5
SEC22C-208ENST00000445388 ABHD5Q8WTS1 349 aa11.94□□□□□ -0.5
SEC22C-208ENST00000445388 CASTOR1Q8WTX7 329 aa11.94□□□□□ -0.5
SEC22C-208ENST00000445388 OR2W1Q9Y3N9 320 aa11.94□□□□□ -0.5
SEC22C-208ENST00000445388 NUBP2Q9Y5Y2 271 aa11.94□□□□□ -0.5
SEC22C-208ENST00000445388 A0A0A6YYH2 397 aa11.93□□□□□ -0.5
SEC22C-208ENST00000445388 A0A1W2PN81 502 aa11.93□□□□□ -0.5
SEC22C-208ENST00000445388 MEIS3P1A6NDR6 274 aa11.93□□□□□ -0.5
SEC22C-208ENST00000445388 A6NJ64 397 aa11.93□□□□□ -0.5
SEC22C-208ENST00000445388 SRRM4A7MD48 611 aaKnown RBP11.93□□□□□ -0.5
SEC22C-208ENST00000445388 ARPC1BO15143 372 aaKnown RBP11.93□□□□□ -0.5
SEC22C-208ENST00000445388 HLA-DQB1P01920 261 aa11.93□□□□□ -0.5
SEC22C-208ENST00000445388 CRYGBP07316 175 aa11.93□□□□□ -0.5
SEC22C-208ENST00000445388 SLC6A1P30531 599 aa11.93□□□□□ -0.5
SEC22C-208ENST00000445388 CHRNA7P36544 502 aa11.93□□□□□ -0.5
SEC22C-208ENST00000445388 LUMP51884 338 aaPredicted RBP11.93□□□□□ -0.5
SEC22C-208ENST00000445388 PJVKQ0ZLH3 352 aa11.93□□□□□ -0.5
SEC22C-208ENST00000445388 TMEM65Q6PI78 240 aa11.93□□□□□ -0.5
SEC22C-208ENST00000445388 PPP1R27Q86WC6 154 aa11.93□□□□□ -0.5
SEC22C-208ENST00000445388 CROCCP3Q8IVE0 287 aa11.93□□□□□ -0.5
SEC22C-208ENST00000445388 ZNF491Q8N8L2 437 aa11.93□□□□□ -0.5
SEC22C-208ENST00000445388 BEST4Q8NFU0 473 aa11.93□□□□□ -0.5
SEC22C-208ENST00000445388 OR13F1Q8NGS4 319 aa11.93□□□□□ -0.5
SEC22C-208ENST00000445388 MYOZ3Q8TDC0 251 aa11.93□□□□□ -0.5
SEC22C-208ENST00000445388 DDB2Q92466 427 aa11.93□□□□□ -0.5
SEC22C-208ENST00000445388 RCC1LQ96I51 464 aaKnown RBP11.93□□□□□ -0.5
SEC22C-208ENST00000445388 NAA50Q9GZZ1 169 aaKnown RBP11.93□□□□□ -0.5
SEC22C-208ENST00000445388 GNB4Q9HAV0 340 aa11.93□□□□□ -0.5
SEC22C-208ENST00000445388 TMEM127O75204 238 aa11.92□□□□□ -0.5
SEC22C-208ENST00000445388 SPDEFO95238 335 aa11.92□□□□□ -0.5
SEC22C-208ENST00000445388 IGLV2-14P01704 120 aa11.92□□□□□ -0.5
SEC22C-208ENST00000445388 RAB9AP51151 201 aa11.92□□□□□ -0.5
SEC22C-208ENST00000445388 CRIP2P52943 208 aaPredicted RBP11.92□□□□□ -0.5
SEC22C-208ENST00000445388 RAB25P57735 213 aa11.92□□□□□ -0.5
SEC22C-208ENST00000445388 SSBP2P81877 361 aaPredicted RBP11.92□□□□□ -0.5
SEC22C-208ENST00000445388 TMEM177Q53S58 311 aa11.92□□□□□ -0.5
SEC22C-208ENST00000445388 UBE2NLQ5JXB2 153 aa11.92□□□□□ -0.5
SEC22C-208ENST00000445388 ZNF562Q6V9R5 426 aa11.92□□□□□ -0.5
SEC22C-208ENST00000445388 HOGA1Q86XE5 327 aa11.92□□□□□ -0.5
SEC22C-208ENST00000445388 ZNF645Q8N7E2 425 aa11.92□□□□□ -0.5
SEC22C-208ENST00000445388 SAMD12Q8N8I0 201 aa11.92□□□□□ -0.5
SEC22C-208ENST00000445388 LFNGQ8NES3 379 aa11.92□□□□□ -0.5
SEC22C-208ENST00000445388 SLC25A46Q96AG3 418 aa11.92□□□□□ -0.5
SEC22C-208ENST00000445388 S100A16Q96FQ6 103 aaKnown RBP11.92□□□□□ -0.5
SEC22C-208ENST00000445388 HARBI1Q96MB7 349 aa11.92□□□□□ -0.5
SEC22C-208ENST00000445388 OR5B12Q96R08 314 aa11.92□□□□□ -0.5
SEC22C-208ENST00000445388 NECAP2Q9NVZ3 263 aa11.92□□□□□ -0.5
SEC22C-208ENST00000445388 AURKAIP1Q9NWT8 199 aaPredicted RBP11.92□□□□□ -0.5
SEC22C-208ENST00000445388 SHOXO15266 292 aa11.91□□□□□ -0.5
SEC22C-208ENST00000445388 XRCC3O43542 346 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms