RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 UFD1Q92890 307 aa11.84□□□□□ -0.51
SEC13-213ENST00000445064 RANGRFQ9HD47 186 aaPredicted RBP11.84□□□□□ -0.51
SEC13-213ENST00000445064 C12orf4Q9NQ89 552 aa11.84□□□□□ -0.51
SEC13-213ENST00000445064 SLC35D1Q9NTN3 355 aa11.84□□□□□ -0.51
SEC13-213ENST00000445064 C13orf42A0A1B0GVH6 325 aa11.83□□□□□ -0.52
SEC13-213ENST00000445064 M0R1X1 148 aa11.83□□□□□ -0.52
SEC13-213ENST00000445064 SPDEFO95238 335 aa11.83□□□□□ -0.52
SEC13-213ENST00000445064 CNIH1O95406 144 aa11.83□□□□□ -0.52
SEC13-213ENST00000445064 IGLV1-51P01701 117 aa11.83□□□□□ -0.52
SEC13-213ENST00000445064 APOA2P02652 100 aa11.83□□□□□ -0.52
SEC13-213ENST00000445064 IGHV4-30-4P0DP06 118 aa11.83□□□□□ -0.52
SEC13-213ENST00000445064 LYL1P12980 280 aa11.83□□□□□ -0.52
SEC13-213ENST00000445064 SSBP2P81877 361 aaPredicted RBP11.83□□□□□ -0.52
SEC13-213ENST00000445064 RAB11BQ15907 218 aa11.83□□□□□ -0.52
SEC13-213ENST00000445064 ANKRD13BQ86YJ7 626 aa11.83□□□□□ -0.52
SEC13-213ENST00000445064 POC5Q8NA72 575 aa11.83□□□□□ -0.52
SEC13-213ENST00000445064 GAR1Q9NY12 217 aaKnown RBP11.83□□□□□ -0.52
SEC13-213ENST00000445064 STUB1Q9UNE7 303 aa11.83□□□□□ -0.52
SEC13-213ENST00000445064 DENRO43583 198 aaKnown RBP11.82□□□□□ -0.52
SEC13-213ENST00000445064 IGLV2-23P01705 113 aa11.82□□□□□ -0.52
SEC13-213ENST00000445064 PLA2G7Q13093 441 aa11.82□□□□□ -0.52
SEC13-213ENST00000445064 TPBGQ13641 420 aa11.82□□□□□ -0.52
SEC13-213ENST00000445064 FAM3DQ96BQ1 224 aa11.82□□□□□ -0.52
SEC13-213ENST00000445064 VCXQ9H320 206 aa11.82□□□□□ -0.52
SEC13-213ENST00000445064 A0A0G2JLM5 398 aa11.81□□□□□ -0.52
SEC13-213ENST00000445064 BET1O15155 118 aa11.81□□□□□ -0.52
SEC13-213ENST00000445064 ARL6IP5O75915 188 aa11.81□□□□□ -0.52
SEC13-213ENST00000445064 CRYGBP07316 175 aa11.81□□□□□ -0.52
SEC13-213ENST00000445064 ZP3P21754 424 aa11.81□□□□□ -0.52
SEC13-213ENST00000445064 LGALS7P47929 136 aa11.81□□□□□ -0.52
SEC13-213ENST00000445064 DEFA5Q01523 94 aa11.81□□□□□ -0.52
SEC13-213ENST00000445064 KLF5Q13887 457 aaPredicted RBP11.81□□□□□ -0.52
SEC13-213ENST00000445064 IGSF11Q5DX21 431 aa11.81□□□□□ -0.52
SEC13-213ENST00000445064 OR56B1Q8NGI3 324 aa11.81□□□□□ -0.52
SEC13-213ENST00000445064 OR4A4PQ8NGN8 299 aa11.81□□□□□ -0.52
SEC13-213ENST00000445064 CITED4Q96RK1 184 aa11.81□□□□□ -0.52
SEC13-213ENST00000445064 TM2D3Q9BRN9 247 aa11.81□□□□□ -0.52
SEC13-213ENST00000445064 PALMDQ9NP74 551 aa11.81□□□□□ -0.52
SEC13-213ENST00000445064 C19orf73Q9NVV2 129 aa11.81□□□□□ -0.52
SEC13-213ENST00000445064 SDHAF2Q9NX18 166 aa11.81□□□□□ -0.52
SEC13-213ENST00000445064 KCNK7Q9Y2U2 307 aa11.81□□□□□ -0.52
SEC13-213ENST00000445064 TPRKBQ9Y3C4 175 aa11.81□□□□□ -0.52
SEC13-213ENST00000445064 H3BUA1 57 aa11.8□□□□□ -0.52
SEC13-213ENST00000445064 LDLRAD4O15165 306 aa11.8□□□□□ -0.52
SEC13-213ENST00000445064 FABP7O15540 132 aa11.8□□□□□ -0.52
SEC13-213ENST00000445064 GSTT2P0CG29 244 aa11.8□□□□□ -0.52
SEC13-213ENST00000445064 GSTT2BP0CG30 244 aa11.8□□□□□ -0.52
SEC13-213ENST00000445064 CALRP27797 417 aaKnown RBP11.8□□□□□ -0.52
SEC13-213ENST00000445064 FABP5Q01469 135 aa11.8□□□□□ -0.52
SEC13-213ENST00000445064 TRAM1Q15629 374 aa11.8□□□□□ -0.52
SEC13-213ENST00000445064 HES5Q5TA89 166 aa11.8□□□□□ -0.52
SEC13-213ENST00000445064 ZFAND6Q6FIF0 208 aa11.8□□□□□ -0.52
SEC13-213ENST00000445064 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.8□□□□□ -0.52
SEC13-213ENST00000445064 BVESQ8NE79 360 aa11.8□□□□□ -0.52
SEC13-213ENST00000445064 OR2D2Q9H210 308 aa11.8□□□□□ -0.52
SEC13-213ENST00000445064 DUSP21Q9H596 190 aa11.8□□□□□ -0.52
SEC13-213ENST00000445064 ADAM30Q9UKF2 790 aa11.8□□□□□ -0.52
SEC13-213ENST00000445064 V9GY05 133 aa11.8□□□□□ -0.52
SEC13-213ENST00000445064 HUWE1Q7Z6Z7 4374 aaKnown RBP11.8□□□□□ -0.52
SEC13-213ENST00000445064 TMEM272A0A1B0GTI8 110 aa11.79□□□□□ -0.52
SEC13-213ENST00000445064 SRRM4A7MD48 611 aaKnown RBP11.79□□□□□ -0.52
SEC13-213ENST00000445064 A8MZ25 164 aa11.79□□□□□ -0.52
SEC13-213ENST00000445064 ANKRD65E5RJM6 399 aa11.79□□□□□ -0.52
SEC13-213ENST00000445064 APELAP0DMC3 54 aa11.79□□□□□ -0.52
SEC13-213ENST00000445064 SERPINB10P48595 397 aa11.79□□□□□ -0.52
SEC13-213ENST00000445064 SYNJ2BPP57105 145 aa11.79□□□□□ -0.52
SEC13-213ENST00000445064 MRPS15P82914 257 aaKnown RBP11.79□□□□□ -0.52
SEC13-213ENST00000445064 MOGAT2Q3SYC2 334 aa11.79□□□□□ -0.52
SEC13-213ENST00000445064 IL34Q6ZMJ4 242 aa11.79□□□□□ -0.52
SEC13-213ENST00000445064 SGPP2Q8IWX5 399 aa11.79□□□□□ -0.52
SEC13-213ENST00000445064 OR9G4Q8NGQ1 327 aa11.79□□□□□ -0.52
SEC13-213ENST00000445064 OR10J5Q8NHC4 309 aa11.79□□□□□ -0.52
SEC13-213ENST00000445064 MAFIPQ8WZ33 124 aa11.79□□□□□ -0.52
SEC13-213ENST00000445064 C5orf30Q96GV9 206 aa11.79□□□□□ -0.52
SEC13-213ENST00000445064 HARBI1Q96MB7 349 aa11.79□□□□□ -0.52
SEC13-213ENST00000445064 TMEM68Q96MH6 324 aa11.79□□□□□ -0.52
SEC13-213ENST00000445064 CCDC90BQ9GZT6 254 aa11.79□□□□□ -0.52
SEC13-213ENST00000445064 PEF1Q9UBV8 284 aaKnown RBP11.79□□□□□ -0.52
SEC13-213ENST00000445064 NKX1-2Q9UD57 310 aaPredicted RBP11.79□□□□□ -0.52
SEC13-213ENST00000445064 RAB22AQ9UL26 194 aa11.79□□□□□ -0.52
SEC13-213ENST00000445064 MSGN1A6NI15 193 aa11.78□□□□□ -0.52
SEC13-213ENST00000445064 SHOXO15266 292 aa11.78□□□□□ -0.52
SEC13-213ENST00000445064 RGS10O43665 173 aa11.78□□□□□ -0.52
SEC13-213ENST00000445064 TRBV12-3P01733 135 aa11.78□□□□□ -0.52
SEC13-213ENST00000445064 FCGR3AP08637 254 aa11.78□□□□□ -0.52
SEC13-213ENST00000445064 PSMA1P25786 263 aaKnown RBP11.78□□□□□ -0.52
SEC13-213ENST00000445064 MLLT11Q13015 90 aaPredicted RBP11.78□□□□□ -0.52
SEC13-213ENST00000445064 MRGPRG-AS1Q2M3A8 158 aa11.78□□□□□ -0.52
SEC13-213ENST00000445064 TMEM177Q53S58 311 aa11.78□□□□□ -0.52
SEC13-213ENST00000445064 ZNF343Q6P1L6 599 aa11.78□□□□□ -0.52
SEC13-213ENST00000445064 RAB3CQ96E17 227 aa11.78□□□□□ -0.52
SEC13-213ENST00000445064 MGLLQ99685 303 aa11.78□□□□□ -0.52
SEC13-213ENST00000445064 TINAGL1Q9GZM7 467 aaPredicted RBP11.78□□□□□ -0.52
SEC13-213ENST00000445064 COA4Q9NYJ1 87 aa11.78□□□□□ -0.52
SEC13-213ENST00000445064 ZNF230Q9UIE0 474 aaPredicted RBP11.78□□□□□ -0.52
SEC13-213ENST00000445064 RBM7Q9Y580 266 aaKnown RBP11.78□□□□□ -0.52
SEC13-213ENST00000445064 STAB2Q8WWQ8 2551 aa11.77□□□□□ -0.52
SEC13-213ENST00000445064 A0A075B6Q4 140 aa11.77□□□□□ -0.53
SEC13-213ENST00000445064 TRBV6-7A0A0A0MS04 114 aa11.77□□□□□ -0.53
SEC13-213ENST00000445064 H0Y980 276 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms