RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 NDUFA3O95167 84 aa13.15□□□□□ -0.3
TSPAN9-204ENST00000444315 CA2P00918 260 aa13.15□□□□□ -0.3
TSPAN9-204ENST00000444315 IGHG4P01861 327 aa13.15□□□□□ -0.3
TSPAN9-204ENST00000444315 LUMP51884 338 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-204ENST00000444315 SCAND1P57086 179 aa13.15□□□□□ -0.3
TSPAN9-204ENST00000444315 FOXB2Q5VYV0 432 aa13.15□□□□□ -0.3
TSPAN9-204ENST00000444315 ZNF660Q6AZW8 331 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-204ENST00000444315 CROCCP3Q8IVE0 287 aa13.15□□□□□ -0.3
TSPAN9-204ENST00000444315 ZNF383Q8NA42 475 aa13.15□□□□□ -0.3
TSPAN9-204ENST00000444315 OR5AN1Q8NGI8 311 aa13.15□□□□□ -0.3
TSPAN9-204ENST00000444315 GRPEL2Q8TAA5 225 aa13.15□□□□□ -0.3
TSPAN9-204ENST00000444315 OR5B12Q96R08 314 aa13.15□□□□□ -0.3
TSPAN9-204ENST00000444315 RNF5Q99942 180 aa13.15□□□□□ -0.3
TSPAN9-204ENST00000444315 ZNF355PQ9NSJ1 428 aa13.15□□□□□ -0.3
TSPAN9-204ENST00000444315 SDHAF2Q9NX18 166 aa13.15□□□□□ -0.3
TSPAN9-204ENST00000444315 TUSC2O75896 110 aa13.14□□□□□ -0.31
TSPAN9-204ENST00000444315 SPDEFO95238 335 aa13.14□□□□□ -0.31
TSPAN9-204ENST00000444315 DIRAS3O95661 229 aa13.14□□□□□ -0.31
TSPAN9-204ENST00000444315 PSG5Q15238 335 aa13.14□□□□□ -0.31
TSPAN9-204ENST00000444315 SRSF7Q16629 238 aaKnown RBP eCLIP13.14□□□□□ -0.31
TSPAN9-204ENST00000444315 UNQ5815/PRO19632Q6UWF5 114 aa13.14□□□□□ -0.31
TSPAN9-204ENST00000444315 PPP1R27Q86WC6 154 aa13.14□□□□□ -0.31
TSPAN9-204ENST00000444315 LINC00482Q8N8I6 264 aa13.14□□□□□ -0.31
TSPAN9-204ENST00000444315 BVESQ8NE79 360 aa13.14□□□□□ -0.31
TSPAN9-204ENST00000444315 OR5H6Q8NGV6 325 aa13.14□□□□□ -0.31
TSPAN9-204ENST00000444315 ADTRPQ96IZ2 230 aa13.14□□□□□ -0.31
TSPAN9-204ENST00000444315 PHB2Q99623 299 aa13.14□□□□□ -0.31
TSPAN9-204ENST00000444315 DCSTAMPQ9H295 470 aa13.14□□□□□ -0.31
TSPAN9-204ENST00000444315 IFT46Q9NQC8 304 aa13.14□□□□□ -0.31
TSPAN9-204ENST00000444315 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.14□□□□□ -0.31
TSPAN9-204ENST00000444315 FOXA2Q9Y261 457 aaPredicted RBP13.14□□□□□ -0.31
TSPAN9-204ENST00000444315 NOTCH3Q9UM47 2321 aa13.14□□□□□ -0.31
TSPAN9-204ENST00000444315 IGKV1-16P04430 117 aa13.13□□□□□ -0.31
TSPAN9-204ENST00000444315 FCER2P06734 321 aa13.13□□□□□ -0.31
TSPAN9-204ENST00000444315 RRASP10301 218 aa13.13□□□□□ -0.31
TSPAN9-204ENST00000444315 NFYAP23511 347 aaPredicted RBP13.13□□□□□ -0.31
TSPAN9-204ENST00000444315 LINC00205P59089 165 aa13.13□□□□□ -0.31
TSPAN9-204ENST00000444315 CX3CL1P78423 397 aa13.13□□□□□ -0.31
TSPAN9-204ENST00000444315 TAGLNQ01995 201 aaKnown RBP13.13□□□□□ -0.31
TSPAN9-204ENST00000444315 H1FOOQ8IZA3 346 aaPredicted RBP13.13□□□□□ -0.31
TSPAN9-204ENST00000444315 WFDC9Q8NEX5 89 aa13.13□□□□□ -0.31
TSPAN9-204ENST00000444315 OR5M8Q8NGP6 311 aa13.13□□□□□ -0.31
TSPAN9-204ENST00000444315 C4orf3Q8WVX3 66 aa13.13□□□□□ -0.31
TSPAN9-204ENST00000444315 ARPC1AQ92747 370 aa13.13□□□□□ -0.31
TSPAN9-204ENST00000444315 RAX2Q96IS3 184 aa13.13□□□□□ -0.31
TSPAN9-204ENST00000444315 FAM103A1Q9BTL3 118 aaKnown RBP13.13□□□□□ -0.31
TSPAN9-204ENST00000444315 VSIG4Q9Y279 399 aa13.13□□□□□ -0.31
TSPAN9-204ENST00000444315 HOXD3P31249 432 aaPredicted RBP13.12□□□□□ -0.31
TSPAN9-204ENST00000444315 CDX1P47902 265 aaPredicted RBP13.12□□□□□ -0.31
TSPAN9-204ENST00000444315 VMA21Q3ZAQ7 101 aa13.12□□□□□ -0.31
TSPAN9-204ENST00000444315 ZNF260Q3ZCT1 412 aa13.12□□□□□ -0.31
TSPAN9-204ENST00000444315 ACTBL2Q562R1 376 aa13.12□□□□□ -0.31
TSPAN9-204ENST00000444315 KPRPQ5T749 579 aaPredicted RBP13.12□□□□□ -0.31
TSPAN9-204ENST00000444315 CNIH2Q6PI25 160 aa13.12□□□□□ -0.31
TSPAN9-204ENST00000444315 ETV3LQ6ZN32 361 aa13.12□□□□□ -0.31
TSPAN9-204ENST00000444315 Q6ZS49 121 aa13.12□□□□□ -0.31
TSPAN9-204ENST00000444315 TCTEX1D1Q8N7M0 179 aa13.12□□□□□ -0.31
TSPAN9-204ENST00000444315 S100A16Q96FQ6 103 aaKnown RBP13.12□□□□□ -0.31
TSPAN9-204ENST00000444315 AURKAIP1Q9NWT8 199 aaPredicted RBP13.12□□□□□ -0.31
TSPAN9-204ENST00000444315 ANXA10Q9UJ72 324 aa13.12□□□□□ -0.31
TSPAN9-204ENST00000444315 ZNF580Q9UK33 172 aa13.12□□□□□ -0.31
TSPAN9-204ENST00000444315 MRPS7Q9Y2R9 242 aaKnown RBP13.12□□□□□ -0.31
TSPAN9-204ENST00000444315 PRELID3BQ9Y3B1 194 aa13.12□□□□□ -0.31
TSPAN9-204ENST00000444315 IGKV1D-8A0A087WSZ0 117 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 A0A0A6YYH2 397 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 A6NJ64 397 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 MPPED1O15442 326 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 CRYZL1O95825 349 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 PSMB8P28062 276 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 TGFBR1P36897 503 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 LGALS7P47929 136 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 NDPQ00604 133 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 CFHR3Q02985 330 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 FXYD3Q14802 87 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 OR2B11Q5JQS5 317 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 UBE2NLQ5JXB2 153 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 PYHIN1Q6K0P9 492 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 KCTD9Q7L273 389 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 ZNF645Q8N7E2 425 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 SAMD12Q8N8I0 201 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 BEST4Q8NFU0 473 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 CASTOR1Q8WTX7 329 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 TOLLIPQ9H0E2 274 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 ZMAT5Q9UDW3 170 aaKnown RBP13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 SPATA2Q9UM82 520 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 OR2W1Q9Y3N9 320 aa13.11□□□□□ -0.31
TSPAN9-204ENST00000444315 MEIS3P1A6NDR6 274 aa13.1□□□□□ -0.31
TSPAN9-204ENST00000444315 FCN1O00602 326 aa13.1□□□□□ -0.31
TSPAN9-204ENST00000444315 TMEM127O75204 238 aa13.1□□□□□ -0.31
TSPAN9-204ENST00000444315 SLC22A5O76082 557 aa13.1□□□□□ -0.31
TSPAN9-204ENST00000444315 ACTL6BO94805 426 aa13.1□□□□□ -0.31
TSPAN9-204ENST00000444315 TPPP2P59282 170 aa13.1□□□□□ -0.31
TSPAN9-204ENST00000444315 DEFB121Q5J5C9 76 aa13.1□□□□□ -0.31
TSPAN9-204ENST00000444315 TMEM69Q5SWH9 247 aa13.1□□□□□ -0.31
TSPAN9-204ENST00000444315 LFNGQ8NES3 379 aa13.1□□□□□ -0.31
TSPAN9-204ENST00000444315 OR11H1Q8NG94 326 aa13.1□□□□□ -0.31
TSPAN9-204ENST00000444315 TCTEX1D2Q8WW35 142 aa13.1□□□□□ -0.31
TSPAN9-204ENST00000444315 ACOT12Q8WYK0 555 aa13.1□□□□□ -0.31
TSPAN9-204ENST00000444315 SLC25A38Q96DW6 304 aa13.1□□□□□ -0.31
TSPAN9-204ENST00000444315 YIPF6Q96EC8 236 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms