RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 TPTE2P1Q5T6R2 138 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 PIP4P2Q8N4L2 257 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 ZNF383Q8NA42 475 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 DDB2Q92466 427 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 ADTRPQ96IZ2 230 aa17.07■□□□□ 0.32
VPS13B-204ENST00000441350 MRPL20Q9BYC9 149 aaKnown RBP17.07■□□□□ 0.32
VPS13B-204ENST00000441350 CELSR1Q9NYQ6 3014 aa17.06■□□□□ 0.32
VPS13B-204ENST00000441350 ACANP16112 2415 aa17.06■□□□□ 0.32
VPS13B-204ENST00000441350 B3GALNT1O75752 331 aa17.06■□□□□ 0.32
VPS13B-204ENST00000441350 GAPDHP04406 335 aaKnown RBP17.06■□□□□ 0.32
VPS13B-204ENST00000441350 CEACAM3P40198 252 aa17.06■□□□□ 0.32
VPS13B-204ENST00000441350 THBS3P49746 956 aa17.06■□□□□ 0.32
VPS13B-204ENST00000441350 ZNF816Q0VGE8 651 aaPredicted RBP17.06■□□□□ 0.32
VPS13B-204ENST00000441350 TMEM187Q14656 261 aa17.06■□□□□ 0.32
VPS13B-204ENST00000441350 SLC9A3R2Q15599 337 aa17.06■□□□□ 0.32
VPS13B-204ENST00000441350 GPR157Q5UAW9 335 aa17.06■□□□□ 0.32
VPS13B-204ENST00000441350 TGIF2LXQ8IUE1 241 aa17.06■□□□□ 0.32
VPS13B-204ENST00000441350 GLYATL2Q8WU03 294 aa17.06■□□□□ 0.32
VPS13B-204ENST00000441350 MITD1Q8WV92 249 aa17.06■□□□□ 0.32
VPS13B-204ENST00000441350 TCTEX1D2Q8WW35 142 aa17.06■□□□□ 0.32
VPS13B-204ENST00000441350 TMEM222Q9H0R3 208 aa17.06■□□□□ 0.32
VPS13B-204ENST00000441350 OR51J1Q9H342 316 aa17.06■□□□□ 0.32
VPS13B-204ENST00000441350 LIN7CQ9NUP9 197 aaKnown RBP17.06■□□□□ 0.32
VPS13B-204ENST00000441350 CD5LO43866 347 aa17.05■□□□□ 0.32
VPS13B-204ENST00000441350 CREBL2O60519 120 aaPredicted RBP17.05■□□□□ 0.32
VPS13B-204ENST00000441350 SAA4P35542 130 aa17.05■□□□□ 0.32
VPS13B-204ENST00000441350 CBX3Q13185 183 aa17.05■□□□□ 0.32
VPS13B-204ENST00000441350 TCTEX1D1Q8N7M0 179 aa17.05■□□□□ 0.32
VPS13B-204ENST00000441350 CASTOR1Q8WTX7 329 aa17.05■□□□□ 0.32
VPS13B-204ENST00000441350 RPEQ96AT9 228 aa17.05■□□□□ 0.32
VPS13B-204ENST00000441350 C18orf12Q96KH6 178 aa17.05■□□□□ 0.32
VPS13B-204ENST00000441350 NABP2Q9BQ15 211 aa17.05■□□□□ 0.32
VPS13B-204ENST00000441350 FAM212BQ9NTI7 297 aaPredicted RBP17.05■□□□□ 0.32
VPS13B-204ENST00000441350 IGHV3OR16-10A0A075B7F0 116 aa17.04■□□□□ 0.32
VPS13B-204ENST00000441350 TXNL1O43396 289 aa17.04■□□□□ 0.32
VPS13B-204ENST00000441350 FSHBP01225 129 aa17.04■□□□□ 0.32
VPS13B-204ENST00000441350 ANXA3P12429 323 aa17.04■□□□□ 0.32
VPS13B-204ENST00000441350 UCP1P25874 307 aa17.04■□□□□ 0.32
VPS13B-204ENST00000441350 ANKRD55Q3KP44 614 aa17.04■□□□□ 0.32
VPS13B-204ENST00000441350 C17orf50Q8WW18 174 aa17.04■□□□□ 0.32
VPS13B-204ENST00000441350 OOSP1A8MZH6 123 aa17.03■□□□□ 0.32
VPS13B-204ENST00000441350 EPHA1P21709 976 aa17.03■□□□□ 0.32
VPS13B-204ENST00000441350 ZNF585BQ52M93 769 aa17.03■□□□□ 0.32
VPS13B-204ENST00000441350 RUSC1-AS1Q66K80 236 aa17.03■□□□□ 0.32
VPS13B-204ENST00000441350 DYNAPQ8N1N2 210 aa17.03■□□□□ 0.32
VPS13B-204ENST00000441350 OR5AN1Q8NGI8 311 aa17.03■□□□□ 0.32
VPS13B-204ENST00000441350 MALSU1Q96EH3 234 aa17.03■□□□□ 0.32
VPS13B-204ENST00000441350 PRR13Q9NZ81 148 aa17.03■□□□□ 0.32
VPS13B-204ENST00000441350 PRELID3BQ9Y3B1 194 aa17.03■□□□□ 0.32
VPS13B-204ENST00000441350 A0A0B4J2A0 478 aa17.03■□□□□ 0.32
VPS13B-204ENST00000441350 IGHV1-3A0A0C4DH29 117 aa17.03■□□□□ 0.32
VPS13B-204ENST00000441350 A0A1W2PPI3 338 aa17.03■□□□□ 0.32
VPS13B-204ENST00000441350 RAMP3O60896 148 aa17.03■□□□□ 0.32
VPS13B-204ENST00000441350 LIAT1Q6ZQX7 453 aa17.03■□□□□ 0.32
VPS13B-204ENST00000441350 SPAG16Q8N0X2 631 aa17.03■□□□□ 0.32
VPS13B-204ENST00000441350 SHPKQ9UHJ6 478 aa17.03■□□□□ 0.32
VPS13B-204ENST00000441350 HILPDAQ9Y5L2 63 aa17.03■□□□□ 0.32
VPS13B-204ENST00000441350 SVEP1Q4LDE5 3571 aa17.02■□□□□ 0.32
VPS13B-204ENST00000441350 TLN2Q9Y4G6 2542 aa17.02■□□□□ 0.32
VPS13B-204ENST00000441350 hCG_2014768A0A024R1R8 64 aa17.02■□□□□ 0.31
VPS13B-204ENST00000441350 H0YJW9 148 aa17.02■□□□□ 0.31
VPS13B-204ENST00000441350 RBFOX2O43251 390 aaKnown RBP eCLIP17.02■□□□□ 0.313e-6■■■■□ 25.5
VPS13B-204ENST00000441350 CDS2O95674 445 aa17.02■□□□□ 0.31
VPS13B-204ENST00000441350 KIR2DS2P43631 304 aa17.02■□□□□ 0.31
VPS13B-204ENST00000441350 SSX2Q16385 188 aa17.02■□□□□ 0.31
VPS13B-204ENST00000441350 OR2B11Q5JQS5 317 aa17.02■□□□□ 0.31
VPS13B-204ENST00000441350 BRD3OSQ6XYD6 125 aa17.02■□□□□ 0.31
VPS13B-204ENST00000441350 OR8H3Q8N146 312 aa17.02■□□□□ 0.31
VPS13B-204ENST00000441350 C12orf45Q8N5I9 185 aaPredicted RBP17.02■□□□□ 0.31
VPS13B-204ENST00000441350 LRTM2Q8N967 370 aa17.02■□□□□ 0.31
VPS13B-204ENST00000441350 CD300LFQ8TDQ1 290 aa17.02■□□□□ 0.31
VPS13B-204ENST00000441350 TMEM56Q96MV1 263 aa17.02■□□□□ 0.31
VPS13B-204ENST00000441350 PHB2Q99623 299 aa17.02■□□□□ 0.31
VPS13B-204ENST00000441350 TMEM56-RWDD3S4R434 201 aa17.02■□□□□ 0.31
VPS13B-204ENST00000441350 A8MV72 311 aaPredicted RBP17.01■□□□□ 0.31
VPS13B-204ENST00000441350 BPIFB3P59826 476 aa17.01■□□□□ 0.31
VPS13B-204ENST00000441350 TAGLNQ01995 201 aaKnown RBP17.01■□□□□ 0.31
VPS13B-204ENST00000441350 CADM3Q8N126 398 aa17.01■□□□□ 0.31
VPS13B-204ENST00000441350 COQ8AQ8NI60 647 aa17.01■□□□□ 0.31
VPS13B-204ENST00000441350 LHFPL5Q8TAF8 219 aa17.01■□□□□ 0.31
VPS13B-204ENST00000441350 DBX1A6NMT0 343 aa17■□□□□ 0.31
VPS13B-204ENST00000441350 CYSRT1A8MQ03 144 aa17■□□□□ 0.31
VPS13B-204ENST00000441350 VGLL3A8MV65 326 aa17■□□□□ 0.31
VPS13B-204ENST00000441350 FCGR3BO75015 233 aa17■□□□□ 0.31
VPS13B-204ENST00000441350 SERPINE2P07093 398 aa17■□□□□ 0.31
VPS13B-204ENST00000441350 SRPXP78539 464 aa17■□□□□ 0.31
VPS13B-204ENST00000441350 HABP2Q14520 560 aaPredicted RBP17■□□□□ 0.31
VPS13B-204ENST00000441350 CCDC144NLQ6NUI1 221 aa17■□□□□ 0.31
VPS13B-204ENST00000441350 NANPQ8TBE9 248 aa17■□□□□ 0.31
VPS13B-204ENST00000441350 TMUB1Q9BVT8 246 aa17■□□□□ 0.31
VPS13B-204ENST00000441350 IGKV1-39P01597 117 aa16.99■□□□□ 0.31
VPS13B-204ENST00000441350 IGKV1D-39P04432 117 aa16.99■□□□□ 0.31
VPS13B-204ENST00000441350 PAX6P26367 422 aa16.99■□□□□ 0.31
VPS13B-204ENST00000441350 LPAR6P43657 344 aa16.99■□□□□ 0.31
VPS13B-204ENST00000441350 LIN54Q6MZP7 749 aa16.99■□□□□ 0.31
VPS13B-204ENST00000441350 MOB3BQ86TA1 216 aa16.99■□□□□ 0.31
VPS13B-204ENST00000441350 LGI3Q8N145 548 aa16.99■□□□□ 0.31
VPS13B-204ENST00000441350 CFHR4Q92496 578 aa16.99■□□□□ 0.31
VPS13B-204ENST00000441350 SLC35D1Q9NTN3 355 aa16.99■□□□□ 0.31
VPS13B-204ENST00000441350 TIMM23O14925 209 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms