RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 ZNF645Q8N7E2 425 aa14.25□□□□□ -0.13
CPSF4-205ENST00000440514 NPBQ8NG41 125 aa14.25□□□□□ -0.13
CPSF4-205ENST00000440514 OR5AU1Q8NGC0 362 aa14.25□□□□□ -0.13
CPSF4-205ENST00000440514 GPX8Q8TED1 209 aa14.25□□□□□ -0.13
CPSF4-205ENST00000440514 RBM38Q9H0Z9 239 aaKnown RBP14.25□□□□□ -0.13
CPSF4-205ENST00000440514 A3GALT2U3KPV4 340 aa14.25□□□□□ -0.13
CPSF4-205ENST00000440514 M0QZ24 198 aa14.24□□□□□ -0.13
CPSF4-205ENST00000440514 RBBP9O75884 186 aa14.24□□□□□ -0.13
CPSF4-205ENST00000440514 NDUFA3O95167 84 aa14.24□□□□□ -0.13
CPSF4-205ENST00000440514 TSPAN15O95858 294 aa14.24□□□□□ -0.13
CPSF4-205ENST00000440514 NAT1P18440 290 aa14.24□□□□□ -0.13
CPSF4-205ENST00000440514 THBS3P49746 956 aa14.24□□□□□ -0.13
CPSF4-205ENST00000440514 C5orf64Q2M2E5 130 aa14.24□□□□□ -0.13
CPSF4-205ENST00000440514 PDPNQ86YL7 162 aa14.24□□□□□ -0.13
CPSF4-205ENST00000440514 DGCR14Q96DF8 476 aaKnown RBP14.24□□□□□ -0.13
CPSF4-205ENST00000440514 CITED2Q99967 270 aaPredicted RBP14.24□□□□□ -0.13
CPSF4-205ENST00000440514 FBXL15Q9H469 300 aa14.24□□□□□ -0.13
CPSF4-205ENST00000440514 EHFQ9NZC4 300 aa14.24□□□□□ -0.13
CPSF4-205ENST00000440514 KIAA1456Q9P272 454 aa14.24□□□□□ -0.13
CPSF4-205ENST00000440514 ZNF107Q9UII5 783 aaPredicted RBP14.24□□□□□ -0.13
CPSF4-205ENST00000440514 PSMB11A5LHX3 300 aa14.23□□□□□ -0.13
CPSF4-205ENST00000440514 LINC00473A8K010 186 aa14.23□□□□□ -0.13
CPSF4-205ENST00000440514 PPYP01298 95 aa14.23□□□□□ -0.13
CPSF4-205ENST00000440514 IGLV2-14P01704 120 aa14.23□□□□□ -0.13
CPSF4-205ENST00000440514 PMP2P02689 132 aa14.23□□□□□ -0.13
CPSF4-205ENST00000440514 DUTP33316 252 aaKnown RBP14.23□□□□□ -0.13
CPSF4-205ENST00000440514 FXYD4P59646 89 aa14.23□□□□□ -0.13
CPSF4-205ENST00000440514 CBX3Q13185 183 aa14.23□□□□□ -0.13
CPSF4-205ENST00000440514 TCTEX1D4Q5JR98 221 aa14.23□□□□□ -0.13
CPSF4-205ENST00000440514 FOXRED2Q8IWF2 684 aa14.23□□□□□ -0.13
CPSF4-205ENST00000440514 BVESQ8NE79 360 aa14.23□□□□□ -0.13
CPSF4-205ENST00000440514 OR5H2Q8NGV7 314 aa14.23□□□□□ -0.13
CPSF4-205ENST00000440514 MCFD2Q8NI22 146 aa14.23□□□□□ -0.13
CPSF4-205ENST00000440514 SECTM1Q8WVN6 248 aa14.23□□□□□ -0.13
CPSF4-205ENST00000440514 ADTRPQ96IZ2 230 aa14.23□□□□□ -0.13
CPSF4-205ENST00000440514 RNF5Q99942 180 aa14.23□□□□□ -0.13
CPSF4-205ENST00000440514 SLIRPQ9GZT3 109 aaKnown RBP14.23□□□□□ -0.13
CPSF4-205ENST00000440514 MMP27Q9H306 513 aa14.23□□□□□ -0.13
CPSF4-205ENST00000440514 RBMX2Q9Y388 322 aaKnown RBP14.23□□□□□ -0.13
CPSF4-205ENST00000440514 RRHO14718 337 aa14.22□□□□□ -0.13
CPSF4-205ENST00000440514 KCNAB3O43448 404 aa14.22□□□□□ -0.13
CPSF4-205ENST00000440514 HLA-DRB1P01911 266 aa14.22□□□□□ -0.13
CPSF4-205ENST00000440514 HLA-DMAP28067 261 aa14.22□□□□□ -0.13
CPSF4-205ENST00000440514 S100A5P33763 92 aa14.22□□□□□ -0.13
CPSF4-205ENST00000440514 RFX2P48378 723 aa14.22□□□□□ -0.13
CPSF4-205ENST00000440514 RPS16P62249 146 aaKnown RBP14.22□□□□□ -0.13
CPSF4-205ENST00000440514 SSBP1Q04837 148 aaKnown RBP14.22□□□□□ -0.13
CPSF4-205ENST00000440514 ACTBL2Q562R1 376 aa14.22□□□□□ -0.13
CPSF4-205ENST00000440514 ZNF329Q86UD4 541 aa14.22□□□□□ -0.13
CPSF4-205ENST00000440514 STPG2Q8N412 459 aa14.22□□□□□ -0.13
CPSF4-205ENST00000440514 DDB2Q92466 427 aa14.22□□□□□ -0.13
CPSF4-205ENST00000440514 C6orf62Q9GZU0 229 aaPredicted RBP14.22□□□□□ -0.13
CPSF4-205ENST00000440514 AP4M1O00189 453 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 RRASP10301 218 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 RCVRNP35243 200 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 HRH1P35367 487 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 RPL30P62888 115 aaKnown RBP14.21□□□□□ -0.13
CPSF4-205ENST00000440514 PLGLAQ15195 96 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 PSG5Q15238 335 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 MSMO1Q15800 293 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 C2orf68Q2NKX9 166 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 NSUN5P1Q3KNT7 163 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 OR2B11Q5JQS5 317 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 PYHIN1Q6K0P9 492 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 KCTD9Q7L273 389 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 TMEM17Q86X19 198 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 LYSMD2Q8IV50 215 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 OR4X2Q8NGF9 303 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 CHPT1Q8WUD6 406 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 FCAMRQ8WWV6 532 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 FLYWCH2Q96CP2 140 aaKnown RBP14.21□□□□□ -0.13
CPSF4-205ENST00000440514 DIRAS2Q96HU8 199 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 ABHD1Q96SE0 405 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 GPHA2Q96T91 129 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 DCUN1D5Q9BTE7 237 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 CCL28Q9NRJ3 127 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 TPSG1Q9NRR2 321 aa14.21□□□□□ -0.13
CPSF4-205ENST00000440514 METTL1Q9UBP6 276 aaKnown RBP14.21□□□□□ -0.13
CPSF4-205ENST00000440514 IGHV7-81A0A0B4J1V7 117 aa14.2□□□□□ -0.14
CPSF4-205ENST00000440514 A0A1W2PRX2 142 aa14.2□□□□□ -0.14
CPSF4-205ENST00000440514 ADARB2-AS1A8MUL3 147 aa14.2□□□□□ -0.14
CPSF4-205ENST00000440514 TBPP20226 339 aa14.2□□□□□ -0.14
CPSF4-205ENST00000440514 HERV-K104P61576 105 aa14.2□□□□□ -0.14
CPSF4-205ENST00000440514 NDPQ00604 133 aa14.2□□□□□ -0.14
CPSF4-205ENST00000440514 EIF4EBP1Q13541 118 aaPredicted RBP14.2□□□□□ -0.14
CPSF4-205ENST00000440514 DYRK1AQ13627 763 aa14.2□□□□□ -0.14
CPSF4-205ENST00000440514 RTL8BQ17RB0 113 aa14.2□□□□□ -0.14
CPSF4-205ENST00000440514 LIN54Q6MZP7 749 aa14.2□□□□□ -0.14
CPSF4-205ENST00000440514 OVCH2Q7RTZ1 564 aa14.2□□□□□ -0.14
CPSF4-205ENST00000440514 ZBTB34Q8NCN2 500 aa14.2□□□□□ -0.14
CPSF4-205ENST00000440514 OR52I2Q8NH67 350 aa14.2□□□□□ -0.14
CPSF4-205ENST00000440514 GIMAP1Q8WWP7 306 aa14.2□□□□□ -0.14
CPSF4-205ENST00000440514 HARBI1Q96MB7 349 aa14.2□□□□□ -0.14
CPSF4-205ENST00000440514 CLCC1Q96S66 551 aa14.2□□□□□ -0.14
CPSF4-205ENST00000440514 TSNAXQ99598 290 aaKnown RBP14.2□□□□□ -0.14
CPSF4-205ENST00000440514 SLC5A7Q9GZV3 580 aa14.2□□□□□ -0.14
CPSF4-205ENST00000440514 NXF2Q9GZY0 626 aaKnown RBP14.2□□□□□ -0.14
CPSF4-205ENST00000440514 PARP11Q9NR21 331 aa14.2□□□□□ -0.14
CPSF4-205ENST00000440514 TAS2R8Q9NYW2 309 aa14.2□□□□□ -0.14
CPSF4-205ENST00000440514 TRRAPQ9Y4A5 3859 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms