RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 PTX4Q96A99 478 aa15.53■□□□□ 0.08
TRIM39-210ENST00000440271 ST6GALNAC5Q9BVH7 336 aa15.53■□□□□ 0.08
TRIM39-210ENST00000440271 ZNF221Q9UK13 617 aa15.53■□□□□ 0.08
TRIM39-210ENST00000440271 EXOSC1Q9Y3B2 195 aaKnown RBP15.53■□□□□ 0.08
TRIM39-210ENST00000440271 A0A0B4J203 849 aa15.52■□□□□ 0.08
TRIM39-210ENST00000440271 IRGMA1A4Y4 181 aa15.52■□□□□ 0.08
TRIM39-210ENST00000440271 DYNC1I1O14576 645 aa15.52■□□□□ 0.08
TRIM39-210ENST00000440271 MOB1BQ7L9L4 216 aa15.52■□□□□ 0.08
TRIM39-210ENST00000440271 ZNF485Q8NCK3 441 aa15.52■□□□□ 0.08
TRIM39-210ENST00000440271 PNMA8CA0A1B0GUJ8 204 aa15.51■□□□□ 0.07
TRIM39-210ENST00000440271 BMPR1BO00238 502 aa15.51■□□□□ 0.07
TRIM39-210ENST00000440271 UBBP0CG47 229 aa15.51■□□□□ 0.07
TRIM39-210ENST00000440271 GUCA2BQ16661 112 aa15.51■□□□□ 0.07
TRIM39-210ENST00000440271 DEFB114Q30KQ6 69 aa15.51■□□□□ 0.07
TRIM39-210ENST00000440271 NICN1Q9BSH3 213 aa15.51■□□□□ 0.07
TRIM39-210ENST00000440271 SLC35D1Q9NTN3 355 aa15.51■□□□□ 0.07
TRIM39-210ENST00000440271 ATP5HO75947 161 aa15.5■□□□□ 0.07
TRIM39-210ENST00000440271 APELAP0DMC3 54 aa15.5■□□□□ 0.07
TRIM39-210ENST00000440271 DYNLRB2Q8TF09 96 aa15.5■□□□□ 0.07
TRIM39-210ENST00000440271 DDB2Q92466 427 aa15.5■□□□□ 0.07
TRIM39-210ENST00000440271 C9orf16Q9BUW7 83 aa15.5■□□□□ 0.07
TRIM39-210ENST00000440271 TMEM59Q9BXS4 323 aa15.5■□□□□ 0.07
TRIM39-210ENST00000440271 RIMS4Q9H426 269 aaPredicted RBP15.5■□□□□ 0.07
TRIM39-210ENST00000440271 PLEKHJ1Q9NW61 149 aa15.5■□□□□ 0.07
TRIM39-210ENST00000440271 TRBV6-6A0A0A6YYG2 114 aa15.49■□□□□ 0.07
TRIM39-210ENST00000440271 CXorf65A6NEN9 183 aa15.49■□□□□ 0.07
TRIM39-210ENST00000440271 MSGN1A6NI15 193 aa15.49■□□□□ 0.07
TRIM39-210ENST00000440271 M0R1X1 148 aa15.49■□□□□ 0.07
TRIM39-210ENST00000440271 SCTP09683 121 aa15.49■□□□□ 0.07
TRIM39-210ENST00000440271 KIR2DS2P43631 304 aa15.49■□□□□ 0.07
TRIM39-210ENST00000440271 HLA-DRB3P79483 266 aa15.49■□□□□ 0.07
TRIM39-210ENST00000440271 ADAD2Q8NCV1 583 aaKnown RBP15.49■□□□□ 0.07
TRIM39-210ENST00000440271 TMEM80Q96HE8 168 aa15.49■□□□□ 0.07
TRIM39-210ENST00000440271 PHB2Q99623 299 aa15.49■□□□□ 0.07
TRIM39-210ENST00000440271 OVOL2Q9BRP0 275 aa15.49■□□□□ 0.07
TRIM39-210ENST00000440271 HDHD3Q9BSH5 251 aaPredicted RBP15.49■□□□□ 0.07
TRIM39-210ENST00000440271 TM2D1Q9BX74 207 aa15.49■□□□□ 0.07
TRIM39-210ENST00000440271 MED21Q13503 144 aa15.48■□□□□ 0.07
TRIM39-210ENST00000440271 PMS2P11Q13670 270 aa15.48■□□□□ 0.07
TRIM39-210ENST00000440271 KCNG3Q8TAE7 436 aa15.48■□□□□ 0.07
TRIM39-210ENST00000440271 AKIP1Q9NQ31 210 aa15.48■□□□□ 0.07
TRIM39-210ENST00000440271 ZC4H2Q9NQZ6 224 aa15.48■□□□□ 0.07
TRIM39-210ENST00000440271 ZNF230Q9UIE0 474 aaPredicted RBP15.48■□□□□ 0.07
TRIM39-210ENST00000440271 AK3Q9UIJ7 227 aa15.48■□□□□ 0.07
TRIM39-210ENST00000440271 OR9G9P0C7N8 305 aa15.47■□□□□ 0.07
TRIM39-210ENST00000440271 TAS2R43P59537 309 aa15.47■□□□□ 0.07
TRIM39-210ENST00000440271 RHOGP84095 191 aa15.47■□□□□ 0.07
TRIM39-210ENST00000440271 ATP5G2Q06055 141 aa15.47■□□□□ 0.07
TRIM39-210ENST00000440271 UNC119Q13432 240 aa15.47■□□□□ 0.07
TRIM39-210ENST00000440271 MRGPRG-AS1Q2M3A8 158 aa15.47■□□□□ 0.07
TRIM39-210ENST00000440271 ZFP1Q6P2D0 407 aa15.47■□□□□ 0.07
TRIM39-210ENST00000440271 WDR89Q96FK6 387 aaPredicted RBP15.47■□□□□ 0.07
TRIM39-210ENST00000440271 HARBI1Q96MB7 349 aa15.47■□□□□ 0.07
TRIM39-210ENST00000440271 KCNK15Q9H427 330 aa15.47■□□□□ 0.07
TRIM39-210ENST00000440271 MGAT4AQ9UM21 535 aa15.47■□□□□ 0.07
TRIM39-210ENST00000440271 PCLOQ9Y6V0 5065 aa15.46■□□□□ 0.07
TRIM39-210ENST00000440271 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.46■□□□□ 0.07
TRIM39-210ENST00000440271 A0A0A6YYD4 124 aa15.46■□□□□ 0.07
TRIM39-210ENST00000440271 NUPR2A6NF83 97 aa15.46■□□□□ 0.07
TRIM39-210ENST00000440271 C2orf70A6NJV1 201 aa15.46■□□□□ 0.07
TRIM39-210ENST00000440271 FAM223BA6NKX1 122 aa15.46■□□□□ 0.07
TRIM39-210ENST00000440271 SRRM4A7MD48 611 aaKnown RBP15.46■□□□□ 0.07
TRIM39-210ENST00000440271 PRH1P02810 166 aa15.46■□□□□ 0.07
TRIM39-210ENST00000440271 FOLR2P14207 255 aa15.46■□□□□ 0.07
TRIM39-210ENST00000440271 CELP19835 753 aa15.46■□□□□ 0.07
TRIM39-210ENST00000440271 EDN2P20800 178 aa15.46■□□□□ 0.07
TRIM39-210ENST00000440271 MAPK3P27361 379 aaPredicted RBP15.46■□□□□ 0.07
TRIM39-210ENST00000440271 EXOSC2Q13868 293 aaKnown RBP15.46■□□□□ 0.07
TRIM39-210ENST00000440271 C1orf100Q5SVJ3 147 aa15.46■□□□□ 0.07
TRIM39-210ENST00000440271 FAM223AQ8IWN6 122 aa15.46■□□□□ 0.07
TRIM39-210ENST00000440271 RPP25LQ8N5L8 163 aaKnown RBP15.46■□□□□ 0.07
TRIM39-210ENST00000440271 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.46■□□□□ 0.07
TRIM39-210ENST00000440271 KCTD12Q96CX2 325 aaKnown RBP15.46■□□□□ 0.07
TRIM39-210ENST00000440271 Q9N2K0 584 aa15.46■□□□□ 0.07
TRIM39-210ENST00000440271 RDH8Q9NYR8 311 aa15.46■□□□□ 0.07
TRIM39-210ENST00000440271 TECRQ9NZ01 308 aaKnown RBP15.46■□□□□ 0.07
TRIM39-210ENST00000440271 IGKV1-6A0A0C4DH72 117 aa15.45■□□□□ 0.06
TRIM39-210ENST00000440271 SHOXO15266 292 aa15.45■□□□□ 0.06
TRIM39-210ENST00000440271 CD1AP06126 327 aa15.45■□□□□ 0.06
TRIM39-210ENST00000440271 QRFPP83859 136 aa15.45■□□□□ 0.06
TRIM39-210ENST00000440271 TMEM177Q53S58 311 aa15.45■□□□□ 0.06
TRIM39-210ENST00000440271 GLT8D1Q68CQ7 371 aa15.45■□□□□ 0.06
TRIM39-210ENST00000440271 SLC16A13Q7RTY0 426 aa15.45■□□□□ 0.06
TRIM39-210ENST00000440271 ZNF555Q8NEP9 628 aa15.45■□□□□ 0.06
TRIM39-210ENST00000440271 THRSPQ92748 146 aa15.45■□□□□ 0.06
TRIM39-210ENST00000440271 GGTLC1Q9BX51 225 aa15.45■□□□□ 0.06
TRIM39-210ENST00000440271 TRBV9A0A0B4J1U6 114 aa15.44■□□□□ 0.06
TRIM39-210ENST00000440271 TMEM14DPA8MWL7 114 aa15.44■□□□□ 0.06
TRIM39-210ENST00000440271 SOCS1O15524 211 aa15.44■□□□□ 0.06
TRIM39-210ENST00000440271 TUSC2O75896 110 aa15.44■□□□□ 0.06
TRIM39-210ENST00000440271 ZNF45Q02386 682 aa15.44■□□□□ 0.06
TRIM39-210ENST00000440271 CEMP1Q6PRD7 247 aaPredicted RBP15.44■□□□□ 0.06
TRIM39-210ENST00000440271 LRRTM1Q86UE6 522 aa15.44■□□□□ 0.06
TRIM39-210ENST00000440271 GGHQ92820 318 aa15.44■□□□□ 0.06
TRIM39-210ENST00000440271 DNAH10Q8IVF4 4471 aa15.43■□□□□ 0.06
TRIM39-210ENST00000440271 MPPED1O15442 326 aa15.43■□□□□ 0.06
TRIM39-210ENST00000440271 EWSR1Q01844 656 aaKnown RBP eCLIP15.43■□□□□ 0.06
TRIM39-210ENST00000440271 ST3GAL4Q11206 333 aa15.43■□□□□ 0.06
TRIM39-210ENST00000440271 INSL4Q14641 139 aa15.43■□□□□ 0.06
TRIM39-210ENST00000440271 TNXAQ16473 311 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms