RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 SEC14L6B5MCN3 397 aa15.48■□□□□ 0.07
SHROOM1-204ENST00000440118 CA2P00918 260 aa15.48■□□□□ 0.07
SHROOM1-204ENST00000440118 IGKV1-16P04430 117 aa15.48■□□□□ 0.07
SHROOM1-204ENST00000440118 OR8U8P0C7N1 319 aa15.48■□□□□ 0.07
SHROOM1-204ENST00000440118 PPIFP30405 207 aaKnown RBP15.48■□□□□ 0.07
SHROOM1-204ENST00000440118 FGF9P31371 208 aaPredicted RBP15.48■□□□□ 0.07
SHROOM1-204ENST00000440118 RAB9AP51151 201 aa15.48■□□□□ 0.07
SHROOM1-204ENST00000440118 DCTN2Q13561 401 aaKnown RBP15.48■□□□□ 0.07
SHROOM1-204ENST00000440118 UNQ5815/PRO19632Q6UWF5 114 aa15.48■□□□□ 0.07
SHROOM1-204ENST00000440118 PPP1R27Q86WC6 154 aa15.48■□□□□ 0.07
SHROOM1-204ENST00000440118 ZNF383Q8NA42 475 aa15.48■□□□□ 0.07
SHROOM1-204ENST00000440118 GNB4Q9HAV0 340 aa15.48■□□□□ 0.07
SHROOM1-204ENST00000440118 TRBV6-7A0A0A0MS04 114 aa15.47■□□□□ 0.07
SHROOM1-204ENST00000440118 SLC25A17O43808 307 aa15.47■□□□□ 0.07
SHROOM1-204ENST00000440118 DIRAS3O95661 229 aa15.47■□□□□ 0.07
SHROOM1-204ENST00000440118 IGLV1-40P01703 118 aa15.47■□□□□ 0.07
SHROOM1-204ENST00000440118 GNB1P62873 340 aa15.47■□□□□ 0.07
SHROOM1-204ENST00000440118 ZNF616Q08AN1 781 aa15.47■□□□□ 0.07
SHROOM1-204ENST00000440118 PSG5Q15238 335 aa15.47■□□□□ 0.07
SHROOM1-204ENST00000440118 RTL8BQ17RB0 113 aa15.47■□□□□ 0.07
SHROOM1-204ENST00000440118 ACTBL2Q562R1 376 aa15.47■□□□□ 0.07
SHROOM1-204ENST00000440118 TPRA1Q86W33 373 aa15.47■□□□□ 0.07
SHROOM1-204ENST00000440118 NR2C2APQ86WQ0 139 aa15.47■□□□□ 0.07
SHROOM1-204ENST00000440118 ZNF491Q8N8L2 437 aa15.47■□□□□ 0.07
SHROOM1-204ENST00000440118 OR1N2Q8NGR9 330 aa15.47■□□□□ 0.07
SHROOM1-204ENST00000440118 GRPEL2Q8TAA5 225 aa15.47■□□□□ 0.07
SHROOM1-204ENST00000440118 ARPC1AQ92747 370 aa15.47■□□□□ 0.07
SHROOM1-204ENST00000440118 FAM103A1Q9BTL3 118 aaKnown RBP15.47■□□□□ 0.07
SHROOM1-204ENST00000440118 FBXO7Q9Y3I1 522 aa15.47■□□□□ 0.07
SHROOM1-204ENST00000440118 LOC100506127A0A0U1RQW1 187 aa15.46■□□□□ 0.07
SHROOM1-204ENST00000440118 SCGNO76038 276 aa15.46■□□□□ 0.07
SHROOM1-204ENST00000440118 CNIH1O95406 144 aa15.46■□□□□ 0.07
SHROOM1-204ENST00000440118 LINC00205P59089 165 aa15.46■□□□□ 0.07
SHROOM1-204ENST00000440118 NEDD8Q15843 81 aa15.46■□□□□ 0.07
SHROOM1-204ENST00000440118 PYHIN1Q6K0P9 492 aa15.46■□□□□ 0.07
SHROOM1-204ENST00000440118 MINDY2Q8NBR6 621 aa15.46■□□□□ 0.07
SHROOM1-204ENST00000440118 LGALS14Q8TCE9 139 aa15.46■□□□□ 0.07
SHROOM1-204ENST00000440118 MYOZ3Q8TDC0 251 aa15.46■□□□□ 0.07
SHROOM1-204ENST00000440118 CASTOR1Q8WTX7 329 aa15.46■□□□□ 0.07
SHROOM1-204ENST00000440118 HARBI1Q96MB7 349 aa15.46■□□□□ 0.07
SHROOM1-204ENST00000440118 MRPS26Q9BYN8 205 aaKnown RBP15.46■□□□□ 0.07
SHROOM1-204ENST00000440118 SDHAF2Q9NX18 166 aa15.46■□□□□ 0.07
SHROOM1-204ENST00000440118 FCN1O00602 326 aa15.45■□□□□ 0.06
SHROOM1-204ENST00000440118 TPPP2P59282 170 aa15.45■□□□□ 0.06
SHROOM1-204ENST00000440118 GNG2P59768 71 aa15.45■□□□□ 0.06
SHROOM1-204ENST00000440118 MXD1Q05195 221 aa15.45■□□□□ 0.06
SHROOM1-204ENST00000440118 CD69Q07108 199 aa15.45■□□□□ 0.06
SHROOM1-204ENST00000440118 FHL3Q13643 280 aa15.45■□□□□ 0.06
SHROOM1-204ENST00000440118 ZNF260Q3ZCT1 412 aa15.45■□□□□ 0.06
SHROOM1-204ENST00000440118 SFXN4Q6P4A7 337 aa15.45■□□□□ 0.06
SHROOM1-204ENST00000440118 ST6GALNAC5Q9BVH7 336 aa15.45■□□□□ 0.06
SHROOM1-204ENST00000440118 OR51E2Q9H255 320 aa15.45■□□□□ 0.06
SHROOM1-204ENST00000440118 GAB2Q9UQC2 676 aa15.45■□□□□ 0.06
SHROOM1-204ENST00000440118 SHOXO15266 292 aa15.44■□□□□ 0.06
SHROOM1-204ENST00000440118 RAMP3O60896 148 aa15.44■□□□□ 0.06
SHROOM1-204ENST00000440118 PROP1O75360 226 aa15.44■□□□□ 0.06
SHROOM1-204ENST00000440118 SNRPBP14678 240 aaKnown RBP15.44■□□□□ 0.06
SHROOM1-204ENST00000440118 DTYMKP23919 212 aa15.44■□□□□ 0.06
SHROOM1-204ENST00000440118 ECI1P42126 302 aa15.44■□□□□ 0.06
SHROOM1-204ENST00000440118 CRIP2P52943 208 aaPredicted RBP15.44■□□□□ 0.06
SHROOM1-204ENST00000440118 CDNFQ49AH0 187 aa15.44■□□□□ 0.06
SHROOM1-204ENST00000440118 ZNF562Q6V9R5 426 aa15.44■□□□□ 0.06
SHROOM1-204ENST00000440118 LFNGQ8NES3 379 aa15.44■□□□□ 0.06
SHROOM1-204ENST00000440118 TOLLIPQ9H0E2 274 aa15.44■□□□□ 0.06
SHROOM1-204ENST00000440118 TPSG1Q9NRR2 321 aa15.44■□□□□ 0.06
SHROOM1-204ENST00000440118 ZNF355PQ9NSJ1 428 aa15.44■□□□□ 0.06
SHROOM1-204ENST00000440118 A0A087WXM4 84 aa15.43■□□□□ 0.06
SHROOM1-204ENST00000440118 SDC2P34741 201 aa15.43■□□□□ 0.06
SHROOM1-204ENST00000440118 PITPNAQ00169 270 aa15.43■□□□□ 0.06
SHROOM1-204ENST00000440118 RUNX1Q01196 453 aa15.43■□□□□ 0.06
SHROOM1-204ENST00000440118 TAGLNQ01995 201 aaKnown RBP15.43■□□□□ 0.06
SHROOM1-204ENST00000440118 FXYD3Q14802 87 aa15.43■□□□□ 0.06
SHROOM1-204ENST00000440118 SRSF7Q16629 238 aaKnown RBP eCLIP15.43■□□□□ 0.06
SHROOM1-204ENST00000440118 KCTD21Q4G0X4 260 aa15.43■□□□□ 0.06
SHROOM1-204ENST00000440118 HACD4Q5VWC8 232 aa15.43■□□□□ 0.06
SHROOM1-204ENST00000440118 BVESQ8NE79 360 aa15.43■□□□□ 0.06
SHROOM1-204ENST00000440118 NUDCD2Q8WVJ2 157 aa15.43■□□□□ 0.06
SHROOM1-204ENST00000440118 ADTRPQ96IZ2 230 aa15.43■□□□□ 0.06
SHROOM1-204ENST00000440118 MS4A10Q96PG2 267 aa15.43■□□□□ 0.06
SHROOM1-204ENST00000440118 VCX3AQ9NNX9 186 aa15.43■□□□□ 0.06
SHROOM1-204ENST00000440118 ELF5Q9UKW6 265 aaPredicted RBP15.43■□□□□ 0.06
SHROOM1-204ENST00000440118 TMEM235A6NFC5 223 aa15.42■□□□□ 0.06
SHROOM1-204ENST00000440118 I3L521 148 aa15.42■□□□□ 0.06
SHROOM1-204ENST00000440118 J3QRK9 145 aa15.42■□□□□ 0.06
SHROOM1-204ENST00000440118 SOX15O60248 233 aa15.42■□□□□ 0.06
SHROOM1-204ENST00000440118 RRASP10301 218 aa15.42■□□□□ 0.06
SHROOM1-204ENST00000440118 RPL5P46777 297 aaKnown RBP15.42■□□□□ 0.06
SHROOM1-204ENST00000440118 LGALS7P47929 136 aa15.42■□□□□ 0.06
SHROOM1-204ENST00000440118 AKIRIN2Q53H80 203 aa15.42■□□□□ 0.06
SHROOM1-204ENST00000440118 Q6ZS49 121 aa15.42■□□□□ 0.06
SHROOM1-204ENST00000440118 H1FOOQ8IZA3 346 aaPredicted RBP15.42■□□□□ 0.06
SHROOM1-204ENST00000440118 ALX4Q9H161 411 aaPredicted RBP15.42■□□□□ 0.06
SHROOM1-204ENST00000440118 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.42■□□□□ 0.06
SHROOM1-204ENST00000440118 RHBDL2Q9NX52 303 aa15.42■□□□□ 0.06
SHROOM1-204ENST00000440118 NUBP2Q9Y5Y2 271 aa15.42■□□□□ 0.06
SHROOM1-204ENST00000440118 IGKV1D-8A0A087WSZ0 117 aa15.41■□□□□ 0.06
SHROOM1-204ENST00000440118 SMIM31A0A1B0GVY4 71 aa15.41■□□□□ 0.06
SHROOM1-204ENST00000440118 A6NHS1 94 aa15.41■□□□□ 0.06
SHROOM1-204ENST00000440118 LY86O95711 162 aa15.41■□□□□ 0.06
SHROOM1-204ENST00000440118 IGHV3-11P01762 117 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms