RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 RUSC1-AS1Q66K80 236 aa16.76■□□□□ 0.27
CHD3-204ENST00000439235 OR8H3Q8N146 312 aa16.76■□□□□ 0.27
CHD3-204ENST00000439235 DRAXINQ8NBI3 349 aaPredicted RBP16.76■□□□□ 0.27
CHD3-204ENST00000439235 MALSU1Q96EH3 234 aa16.76■□□□□ 0.27
CHD3-204ENST00000439235 SEC22CQ9BRL7 303 aa16.76■□□□□ 0.27
CHD3-204ENST00000439235 C7orf66A4D0T2 115 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 SNRPGP15A8MWD9 76 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 CREBL2O60519 120 aaPredicted RBP16.75■□□□□ 0.27
CHD3-204ENST00000439235 FSHBP01225 129 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 APOA2P02652 100 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 OR5AC1P0C628 307 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 CT45A6P0DMU7 189 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 CT45A5P0DMU8 189 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 CT45A7P0DMV0 189 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 CD99P14209 185 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 RPL30P62888 115 aaKnown RBP16.75■□□□□ 0.27
CHD3-204ENST00000439235 SUPT4H1P63272 117 aaKnown RBP16.75■□□□□ 0.27
CHD3-204ENST00000439235 DIAPH2-AS1Q14236 149 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 SLC9A3R2Q15599 337 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 LDLRAD2Q5SZI1 272 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 PIP4P2Q8N4L2 257 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 CD300LFQ8TDQ1 290 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 ZNF431Q8TF32 576 aaPredicted RBP16.75■□□□□ 0.27
CHD3-204ENST00000439235 NABP2Q9BQ15 211 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 TMUB1Q9BVT8 246 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 YAE1D1Q9NRH1 226 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 FAM212BQ9NTI7 297 aaPredicted RBP16.75■□□□□ 0.27
CHD3-204ENST00000439235 NUP50Q9UKX7 468 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 HILPDAQ9Y5L2 63 aa16.75■□□□□ 0.27
CHD3-204ENST00000439235 IGHV1-3A0A0C4DH29 117 aa16.74■□□□□ 0.27
CHD3-204ENST00000439235 LINC00473A8K010 186 aa16.74■□□□□ 0.27
CHD3-204ENST00000439235 A8MV72 311 aaPredicted RBP16.74■□□□□ 0.27
CHD3-204ENST00000439235 RRASP10301 218 aa16.74■□□□□ 0.27
CHD3-204ENST00000439235 SRPXP78539 464 aa16.74■□□□□ 0.27
CHD3-204ENST00000439235 CBX3Q13185 183 aa16.74■□□□□ 0.27
CHD3-204ENST00000439235 RTL8BQ17RB0 113 aa16.74■□□□□ 0.27
CHD3-204ENST00000439235 BRD3OSQ6XYD6 125 aa16.74■□□□□ 0.27
CHD3-204ENST00000439235 ZNF383Q8NA42 475 aa16.74■□□□□ 0.27
CHD3-204ENST00000439235 CASTOR1Q8WTX7 329 aa16.74■□□□□ 0.27
CHD3-204ENST00000439235 DDB2Q92466 427 aa16.74■□□□□ 0.27
CHD3-204ENST00000439235 TP53RKQ96S44 253 aa16.74■□□□□ 0.27
CHD3-204ENST00000439235 SLC35D1Q9NTN3 355 aa16.74■□□□□ 0.27
CHD3-204ENST00000439235 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.74■□□□□ 0.275e-6■□□□□ 9.9
CHD3-204ENST00000439235 A0A0B4J293 547 aa16.73■□□□□ 0.27
CHD3-204ENST00000439235 PIGBOS1A0A0B4J2F0 54 aa16.73■□□□□ 0.27
CHD3-204ENST00000439235 A0A1W2PPI3 338 aa16.73■□□□□ 0.27
CHD3-204ENST00000439235 RBFOX2O43251 390 aaKnown RBP eCLIP16.73■□□□□ 0.279e-6■■□□□ 11.7
CHD3-204ENST00000439235 DUS4LO95620 317 aaKnown RBP16.73■□□□□ 0.27
CHD3-204ENST00000439235 SERPINE2P07093 398 aa16.73■□□□□ 0.27
CHD3-204ENST00000439235 HNF1AP20823 631 aa16.73■□□□□ 0.27
CHD3-204ENST00000439235 UCP1P25874 307 aa16.73■□□□□ 0.27
CHD3-204ENST00000439235 MC5RP33032 325 aa16.73■□□□□ 0.27
CHD3-204ENST00000439235 RAB13P51153 203 aa16.73■□□□□ 0.27
CHD3-204ENST00000439235 SSX2Q16385 188 aa16.73■□□□□ 0.27
CHD3-204ENST00000439235 MOB3BQ86TA1 216 aa16.73■□□□□ 0.27
CHD3-204ENST00000439235 SPAG16Q8N0X2 631 aa16.73■□□□□ 0.27
CHD3-204ENST00000439235 OR52B4Q8NGK2 314 aa16.73■□□□□ 0.27
CHD3-204ENST00000439235 OR4S2Q8NH73 311 aa16.73■□□□□ 0.27
CHD3-204ENST00000439235 COQ8AQ8NI60 647 aa16.73■□□□□ 0.27
CHD3-204ENST00000439235 TMEM222Q9H0R3 208 aa16.73■□□□□ 0.27
CHD3-204ENST00000439235 ALG5Q9Y673 324 aa16.73■□□□□ 0.27
CHD3-204ENST00000439235 MED13LQ71F56 2210 aa16.73■□□□□ 0.27
CHD3-204ENST00000439235 A0A0A6YYJ9 748 aa16.72■□□□□ 0.27
CHD3-204ENST00000439235 H0YJW9 148 aa16.72■□□□□ 0.27
CHD3-204ENST00000439235 TMEM187Q14656 261 aa16.72■□□□□ 0.27
CHD3-204ENST00000439235 SP6Q3SY56 376 aa16.72■□□□□ 0.27
CHD3-204ENST00000439235 OR2B11Q5JQS5 317 aa16.72■□□□□ 0.27
CHD3-204ENST00000439235 DHRS7BQ6IAN0 325 aaPredicted RBP16.72■□□□□ 0.27
CHD3-204ENST00000439235 OR5AN1Q8NGI8 311 aa16.72■□□□□ 0.27
CHD3-204ENST00000439235 PHB2Q99623 299 aa16.72■□□□□ 0.27
CHD3-204ENST00000439235 MS4A7Q9GZW8 240 aaPredicted RBP16.72■□□□□ 0.27
CHD3-204ENST00000439235 FAM96BQ9Y3D0 163 aa16.72■□□□□ 0.27
CHD3-204ENST00000439235 ITPR3Q14573 2671 aa16.72■□□□□ 0.27
CHD3-204ENST00000439235 A0A0B4J2A0 478 aa16.71■□□□□ 0.27
CHD3-204ENST00000439235 FCGR3BO75015 233 aa16.71■□□□□ 0.27
CHD3-204ENST00000439235 RPA2P15927 270 aa16.71■□□□□ 0.27
CHD3-204ENST00000439235 LINC00205P59089 165 aa16.71■□□□□ 0.27
CHD3-204ENST00000439235 LIAT1Q6ZQX7 453 aa16.71■□□□□ 0.27
CHD3-204ENST00000439235 PDPNQ86YL7 162 aa16.71■□□□□ 0.27
CHD3-204ENST00000439235 LGI3Q8N145 548 aa16.71■□□□□ 0.27
CHD3-204ENST00000439235 MITD1Q8WV92 249 aa16.71■□□□□ 0.27
CHD3-204ENST00000439235 C17orf50Q8WW18 174 aa16.71■□□□□ 0.27
CHD3-204ENST00000439235 OR51J1Q9H342 316 aa16.71■□□□□ 0.27
CHD3-204ENST00000439235 TMEM160Q9NX00 188 aa16.71■□□□□ 0.27
CHD3-204ENST00000439235 SHPKQ9UHJ6 478 aa16.71■□□□□ 0.27
CHD3-204ENST00000439235 WASHC3Q9Y3C0 194 aa16.71■□□□□ 0.27
CHD3-204ENST00000439235 A0A0U1RQK1 487 aa16.7■□□□□ 0.26
CHD3-204ENST00000439235 H7C2Y5 167 aa16.7■□□□□ 0.26
CHD3-204ENST00000439235 TIMM23O14925 209 aa16.7■□□□□ 0.26
CHD3-204ENST00000439235 FBP1P09467 338 aa16.7■□□□□ 0.26
CHD3-204ENST00000439235 FAM120AOSQ5T036 256 aa16.7■□□□□ 0.26
CHD3-204ENST00000439235 C9orf139Q6ZV77 190 aa16.7■□□□□ 0.26
CHD3-204ENST00000439235 DYNAPQ8N1N2 210 aa16.7■□□□□ 0.26
CHD3-204ENST00000439235 C12orf45Q8N5I9 185 aaPredicted RBP16.7■□□□□ 0.26
CHD3-204ENST00000439235 GLYATL2Q8WU03 294 aa16.7■□□□□ 0.26
CHD3-204ENST00000439235 IL22RA2Q969J5 263 aa16.7■□□□□ 0.26
CHD3-204ENST00000439235 AJUBAQ96IF1 538 aa16.7■□□□□ 0.26
CHD3-204ENST00000439235 OTOGQ6ZRI0 2925 aa16.69■□□□□ 0.26
CHD3-204ENST00000439235 ATG12O94817 140 aa16.69■□□□□ 0.26
CHD3-204ENST00000439235 LY6G6DO95868 133 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms