RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 UXS1Q8NBZ7 420 aa18.66■□□□□ 0.58
CPSF4-204ENST00000436336 CHAC2Q8WUX2 184 aa18.66■□□□□ 0.58
CPSF4-204ENST00000436336 DDB2Q92466 427 aa18.66■□□□□ 0.58
CPSF4-204ENST00000436336 PRELID3BQ9Y3B1 194 aa18.66■□□□□ 0.58
CPSF4-204ENST00000436336 TBL2Q9Y4P3 447 aaKnown RBP18.66■□□□□ 0.58
CPSF4-204ENST00000436336 TXNL1O43396 289 aa18.65■□□□□ 0.58
CPSF4-204ENST00000436336 LGALS4P56470 323 aa18.65■□□□□ 0.58
CPSF4-204ENST00000436336 MINOS1Q5TGZ0 78 aa18.65■□□□□ 0.58
CPSF4-204ENST00000436336 LIN54Q6MZP7 749 aa18.65■□□□□ 0.58
CPSF4-204ENST00000436336 SPAG16Q8N0X2 631 aa18.65■□□□□ 0.58
CPSF4-204ENST00000436336 LGI3Q8N145 548 aa18.65■□□□□ 0.58
CPSF4-204ENST00000436336 RPEQ96AT9 228 aa18.65■□□□□ 0.58
CPSF4-204ENST00000436336 TMEM56Q96MV1 263 aa18.65■□□□□ 0.58
CPSF4-204ENST00000436336 MINOS1-NBL1R4GNA1 71 aa18.65■□□□□ 0.58
CPSF4-204ENST00000436336 TMEM56-RWDD3S4R434 201 aa18.65■□□□□ 0.58
CPSF4-204ENST00000436336 A0A1W2PRD5 423 aa18.64■□□□□ 0.57
CPSF4-204ENST00000436336 A0A1W2PRF3 423 aa18.64■□□□□ 0.57
CPSF4-204ENST00000436336 A0A1W2PRM7 423 aa18.64■□□□□ 0.57
CPSF4-204ENST00000436336 HMX3A6NHT5 357 aa18.64■□□□□ 0.57
CPSF4-204ENST00000436336 DBX1A6NMT0 343 aa18.64■□□□□ 0.57
CPSF4-204ENST00000436336 SMAD7O15105 426 aaKnown RBP18.64■□□□□ 0.57
CPSF4-204ENST00000436336 CDS2O95674 445 aa18.64■□□□□ 0.57
CPSF4-204ENST00000436336 GAPDHP04406 335 aaKnown RBP18.64■□□□□ 0.57
CPSF4-204ENST00000436336 SERPINE2P07093 398 aa18.64■□□□□ 0.57
CPSF4-204ENST00000436336 TRAPPC2P0DI81 140 aa18.64■□□□□ 0.57
CPSF4-204ENST00000436336 TRAPPC2BP0DI82 140 aa18.64■□□□□ 0.57
CPSF4-204ENST00000436336 KIR2DS2P43631 304 aa18.64■□□□□ 0.57
CPSF4-204ENST00000436336 REG1BP48304 166 aa18.64■□□□□ 0.57
CPSF4-204ENST00000436336 ZNF816Q0VGE8 651 aaPredicted RBP18.64■□□□□ 0.57
CPSF4-204ENST00000436336 ZNF383Q8NA42 475 aa18.64■□□□□ 0.57
CPSF4-204ENST00000436336 CD300LFQ8TDQ1 290 aa18.64■□□□□ 0.57
CPSF4-204ENST00000436336 NABP2Q9BQ15 211 aa18.64■□□□□ 0.57
CPSF4-204ENST00000436336 MRPL20Q9BYC9 149 aaKnown RBP18.64■□□□□ 0.57
CPSF4-204ENST00000436336 BRWD1-AS2P59051 145 aa18.63■□□□□ 0.57
CPSF4-204ENST00000436336 MIDNQ504T8 468 aa18.63■□□□□ 0.57
CPSF4-204ENST00000436336 ZNF585BQ52M93 769 aa18.63■□□□□ 0.57
CPSF4-204ENST00000436336 LDLRAD2Q5SZI1 272 aa18.63■□□□□ 0.57
CPSF4-204ENST00000436336 TPTE2P1Q5T6R2 138 aa18.63■□□□□ 0.57
CPSF4-204ENST00000436336 CREBBPQ92793 2442 aa18.63■□□□□ 0.57
CPSF4-204ENST00000436336 TRAV40A0A0B4J280 105 aa18.63■□□□□ 0.57
CPSF4-204ENST00000436336 PIGBOS1A0A0B4J2F0 54 aa18.63■□□□□ 0.57
CPSF4-204ENST00000436336 RPA2P15927 270 aa18.63■□□□□ 0.57
CPSF4-204ENST00000436336 EPHA1P21709 976 aa18.63■□□□□ 0.57
CPSF4-204ENST00000436336 TAGLNQ01995 201 aaKnown RBP18.63■□□□□ 0.57
CPSF4-204ENST00000436336 FCN2Q15485 313 aa18.63■□□□□ 0.57
CPSF4-204ENST00000436336 OR2B11Q5JQS5 317 aa18.63■□□□□ 0.57
CPSF4-204ENST00000436336 LHFPL4Q7Z7J7 247 aa18.63■□□□□ 0.57
CPSF4-204ENST00000436336 ZNF695Q8IW36 515 aa18.63■□□□□ 0.57
CPSF4-204ENST00000436336 LHFPL5Q8TAF8 219 aa18.63■□□□□ 0.57
CPSF4-204ENST00000436336 IL22RA2Q969J5 263 aa18.63■□□□□ 0.57
CPSF4-204ENST00000436336 IGHV1-69DA0A0B4J2H0 117 aa18.62■□□□□ 0.57
CPSF4-204ENST00000436336 NPFFO15130 113 aa18.62■□□□□ 0.57
CPSF4-204ENST00000436336 RBFOX2O43251 390 aaKnown RBP eCLIP18.62■□□□□ 0.57
CPSF4-204ENST00000436336 RAMP3O60896 148 aa18.62■□□□□ 0.57
CPSF4-204ENST00000436336 FCGR3BO75015 233 aa18.62■□□□□ 0.57
CPSF4-204ENST00000436336 IGHV1-69P01742 117 aa18.62■□□□□ 0.57
CPSF4-204ENST00000436336 SULT1A3P0DMM9 295 aa18.62■□□□□ 0.57
CPSF4-204ENST00000436336 SULT1A4P0DMN0 295 aa18.62■□□□□ 0.57
CPSF4-204ENST00000436336 GPR157Q5UAW9 335 aa18.62■□□□□ 0.57
CPSF4-204ENST00000436336 TMEM268Q5VZI3 342 aa18.62■□□□□ 0.57
CPSF4-204ENST00000436336 OR5AN1Q8NGI8 311 aa18.62■□□□□ 0.57
CPSF4-204ENST00000436336 BAHCC1Q9P281 2608 aa18.61■□□□□ 0.57
CPSF4-204ENST00000436336 OOSP1A8MZH6 123 aa18.61■□□□□ 0.57
CPSF4-204ENST00000436336 AVPP01185 164 aa18.61■□□□□ 0.57
CPSF4-204ENST00000436336 LPAR6P43657 344 aa18.61■□□□□ 0.57
CPSF4-204ENST00000436336 SELENOHQ8IZQ5 122 aaKnown RBP18.61■□□□□ 0.57
CPSF4-204ENST00000436336 RBPMSQ93062 196 aaKnown RBP18.61■□□□□ 0.57
CPSF4-204ENST00000436336 C18orf12Q96KH6 178 aa18.61■□□□□ 0.57
CPSF4-204ENST00000436336 MGAT4CQ9UBM8 478 aa18.61■□□□□ 0.57
CPSF4-204ENST00000436336 AKAP9Q99996 3911 aa18.61■□□□□ 0.57
CPSF4-204ENST00000436336 ABCA1O95477 2261 aa18.61■□□□□ 0.57
CPSF4-204ENST00000436336 IGHV1-3A0A0C4DH29 117 aa18.6■□□□□ 0.57
CPSF4-204ENST00000436336 A8MV72 311 aaPredicted RBP18.6■□□□□ 0.57
CPSF4-204ENST00000436336 APOA2P02652 100 aa18.6■□□□□ 0.57
CPSF4-204ENST00000436336 HLA-GP17693 338 aa18.6■□□□□ 0.57
CPSF4-204ENST00000436336 OR11H7Q8NGC8 314 aa18.6■□□□□ 0.57
CPSF4-204ENST00000436336 MALSU1Q96EH3 234 aa18.6■□□□□ 0.57
CPSF4-204ENST00000436336 RAB18Q9NP72 206 aa18.6■□□□□ 0.57
CPSF4-204ENST00000436336 SLC35D1Q9NTN3 355 aa18.6■□□□□ 0.57
CPSF4-204ENST00000436336 DUXBA0A1W2PPF3 345 aa18.6■□□□□ 0.57
CPSF4-204ENST00000436336 H0YJW9 148 aa18.6■□□□□ 0.57
CPSF4-204ENST00000436336 GOSR2O14653 212 aa18.6■□□□□ 0.57
CPSF4-204ENST00000436336 HPRT1P00492 218 aa18.6■□□□□ 0.57
CPSF4-204ENST00000436336 RRASP10301 218 aa18.6■□□□□ 0.57
CPSF4-204ENST00000436336 SAA4P35542 130 aa18.6■□□□□ 0.57
CPSF4-204ENST00000436336 RTL8BQ17RB0 113 aa18.6■□□□□ 0.57
CPSF4-204ENST00000436336 C2orf68Q2NKX9 166 aa18.6■□□□□ 0.57
CPSF4-204ENST00000436336 OR8H3Q8N146 312 aa18.6■□□□□ 0.57
CPSF4-204ENST00000436336 OR4S2Q8NH73 311 aa18.6■□□□□ 0.57
CPSF4-204ENST00000436336 CXCL3P19876 107 aa18.59■□□□□ 0.57
CPSF4-204ENST00000436336 MC5RP33032 325 aa18.59■□□□□ 0.57
CPSF4-204ENST00000436336 DHRS7BQ6IAN0 325 aaPredicted RBP18.59■□□□□ 0.57
CPSF4-204ENST00000436336 CCDC144NLQ6NUI1 221 aa18.59■□□□□ 0.57
CPSF4-204ENST00000436336 PIP4P2Q8N4L2 257 aa18.59■□□□□ 0.57
CPSF4-204ENST00000436336 SLC35G3Q8N808 338 aa18.59■□□□□ 0.57
CPSF4-204ENST00000436336 PLEKHA2Q9HB19 425 aa18.59■□□□□ 0.57
CPSF4-204ENST00000436336 HILPDAQ9Y5L2 63 aa18.59■□□□□ 0.57
CPSF4-204ENST00000436336 A0A1W2PPI3 338 aa18.58■□□□□ 0.57
CPSF4-204ENST00000436336 ADAP1O75689 374 aa18.58■□□□□ 0.57
CPSF4-204ENST00000436336 IGKV1-39P01597 117 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms