RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 TAAR6Q96RI8 345 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 P2RX4Q99571 388 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 HSD17B10Q99714 261 aaKnown RBP6.22□□□□□ -1.41
COL17A1-204ENST00000433822 SH3BGRL3Q9H299 93 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 TMEM231Q9H6L2 316 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 SIRT7Q9NRC8 400 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 OR1A1Q9P1Q5 309 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 HSPB7Q9UBY9 170 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 PROCRQ9UNN8 238 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 SLC25A15Q9Y619 301 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 ARID1AO14497 2285 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 IGHV2OR16-5A0A0B4J2B6 119 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 C7orf77A4D0Y5 90 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 SRRM5B3KS81 715 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 SIRPB1O00241 398 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 NUPL2O15504 423 aaKnown RBP6.21□□□□□ -1.42
COL17A1-204ENST00000433822 NKX2-8O15522 239 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 RBFOX2O43251 390 aaKnown RBP eCLIP6.21□□□□□ -1.42
COL17A1-204ENST00000433822 PSPNO60542 156 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 TNFSF13O75888 250 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 CLDN14O95500 239 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 IGKV1-5P01602 117 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 IGHV3-13P01766 116 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 CECR9P0C854 216 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 GZMHP20718 246 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 IL2RGP31785 369 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 TIMP3P35625 211 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 MPV17P39210 176 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 CEACAM6P40199 344 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 OR3A1P47881 315 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 PPT1P50897 306 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 CCL11P51671 97 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 RAB5BP61020 215 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 TNFRSF9Q07011 255 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 PNRC1Q12796 327 aaPredicted RBP6.21□□□□□ -1.42
COL17A1-204ENST00000433822 LRRC75BQ2VPJ9 315 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 TMEM249Q2WGJ8 235 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 AWAT1Q58HT5 328 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 SOHLH1Q5JUK2 328 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 SPATA46Q5T0L3 261 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 TMEM88Q6PEY1 159 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 Q6ZS92 163 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 SLC35E3Q7Z769 313 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 FGFRL1Q8N441 504 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 ZADH2Q8N4Q0 377 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 ZNF561Q8N587 486 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 OR51H1Q8NH63 302 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 RNASE11Q8TAA1 199 aaKnown RBP6.21□□□□□ -1.42
COL17A1-204ENST00000433822 SCGB1C1Q8TD33 95 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 NINJ1Q92982 152 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 EIF5A2Q9GZV4 153 aaKnown RBP6.21□□□□□ -1.42
COL17A1-204ENST00000433822 PRORYQ9H606 182 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 DKK4Q9UBT3 224 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 CACNG5Q9UF02 275 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 JPT1Q9UK76 154 aa6.21□□□□□ -1.42
COL17A1-204ENST00000433822 RBM7Q9Y580 266 aaKnown RBP6.21□□□□□ -1.42
COL17A1-204ENST00000433822 IGLV3-9A0A075B6K5 115 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 IGHV1-18A0A0C4DH31 117 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 C12orf77C9JDV5 145 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 MGST3O14880 152 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 SIGLEC5O15389 551 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 SPINT2O43291 252 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 TIMM8AO60220 97 aaPredicted RBP6.2□□□□□ -1.42
COL17A1-204ENST00000433822 YPEL1O60688 119 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 ZNF737O75373 536 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 CST7O76096 145 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 HBZP02008 142 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 MBP02144 154 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 CRYABP02511 175 aaKnown RBP6.2□□□□□ -1.42
COL17A1-204ENST00000433822 SRP19P09132 144 aaKnown RBP6.2□□□□□ -1.42
COL17A1-204ENST00000433822 GLRXP35754 106 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 PPP1CCP36873 323 aaKnown RBP6.2□□□□□ -1.42
COL17A1-204ENST00000433822 KIR2DS2P43631 304 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 FHITP49789 147 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 UBE2KP61086 200 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 ERVS71-1P61550 626 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 RPS23P62266 143 aaKnown RBP6.2□□□□□ -1.42
COL17A1-204ENST00000433822 PMP22Q01453 160 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 VWC2Q2TAL6 325 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 VWA1Q6PCB0 445 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 Q6ZRM9 215 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 BHLHA15Q7RTS1 189 aaPredicted RBP6.2□□□□□ -1.42
COL17A1-204ENST00000433822 GCNT2Q8N0V5 402 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 BATF2Q8N1L9 274 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.2□□□□□ -1.42
COL17A1-204ENST00000433822 OR52E5Q8NH55 327 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 CLDND2Q8NHS1 167 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 IL1F10Q8WWZ1 152 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 HIST1H2BAQ96A08 127 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 STARD4Q96DR4 205 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 COQ2Q96H96 371 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 SNX22Q96L94 193 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 YPEL2Q96QA6 119 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 SFXN3Q9BWM7 321 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 WDR61Q9GZS3 305 aaKnown RBP6.2□□□□□ -1.42
COL17A1-204ENST00000433822 MAGT1Q9H0U3 335 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.2□□□□□ -1.42
COL17A1-204ENST00000433822 TMEM242Q9NWH2 141 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 PSENENQ9NZ42 101 aa6.2□□□□□ -1.42
COL17A1-204ENST00000433822 CISD1Q9NZ45 108 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms