RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 JSRP1Q96MG2 331 aaPredicted RBP6.85□□□□□ -1.31
VTI1A-202ENST00000432306 HDHD3Q9BSH5 251 aaPredicted RBP6.85□□□□□ -1.31
VTI1A-202ENST00000432306 EMC6Q9BV81 110 aa6.85□□□□□ -1.31
VTI1A-202ENST00000432306 PRO1933Q9H354 126 aa6.85□□□□□ -1.31
VTI1A-202ENST00000432306 OR14J1Q9UGF5 321 aa6.85□□□□□ -1.31
VTI1A-202ENST00000432306 NAT8Q9UHE5 227 aa6.85□□□□□ -1.31
VTI1A-202ENST00000432306 ZNF391Q9UJN7 358 aa6.85□□□□□ -1.31
VTI1A-202ENST00000432306 SLC45A2Q9UMX9 530 aa6.85□□□□□ -1.31
VTI1A-202ENST00000432306 POLR1DQ9Y2S0 133 aa6.85□□□□□ -1.31
VTI1A-202ENST00000432306 SPTBP11277 2137 aa6.85□□□□□ -1.31
VTI1A-202ENST00000432306 NKX2-6A6NCS4 301 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 TMEM50AO95807 157 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 CTXN2P0C2S0 81 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 GLB1P16278 677 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 DYNLT3P51808 116 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 PTTG1IPP53801 180 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 ELLP55199 621 aaPredicted RBP6.84□□□□□ -1.31
VTI1A-202ENST00000432306 LCN2P80188 198 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 MYBPHQ13203 477 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 ENDOGQ14249 297 aaKnown RBP6.84□□□□□ -1.31
VTI1A-202ENST00000432306 PLPPR5Q32ZL2 321 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 KRTAP27-1Q3LI81 207 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 PDZD11Q5EBL8 140 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 ACTL10Q5JWF8 245 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 DCAF10Q5QP82 559 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 C1orf194Q5T5A4 169 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 FAM159AQ6UWV7 190 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 LANCL3Q6ZV70 420 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 OR5D18Q8NGL1 313 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 TMEM54Q969K7 222 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 TOMM40LQ969M1 308 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 NABP1Q96AH0 204 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 TMEM18Q96B42 140 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 PINX1Q96BK5 328 aaKnown RBP6.84□□□□□ -1.31
VTI1A-202ENST00000432306 REEP6Q96HR9 211 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 BTF3L4Q96K17 158 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 OR51B6Q9H340 312 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 RPH3ALQ9UNE2 315 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 SLC7A11Q9UPY5 501 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 FBLL1A6NHQ2 334 aaKnown RBP6.84□□□□□ -1.31
VTI1A-202ENST00000432306 M0R143 59 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 PDCD6O75340 191 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 IGHV4-34P06331 123 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 LINC00614P0C842 121 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 FAHP16930 419 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 CRYGSP22914 178 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 GNRHRP30968 328 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 GNG10P50151 68 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 TDGF1P3P51864 188 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 TMPRSS3P57727 454 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 COL10A1Q03692 680 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 TSPO2Q5TGU0 170 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 BTNL3Q6UXE8 466 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 DTX1Q86Y01 620 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 KMT5CQ86Y97 462 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 SPACA3Q8IXA5 215 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 OR5L1Q8NGL2 311 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 TECTBQ96PL2 329 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 FAAP24Q9BTP7 215 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 SNHG12Q9BXW3 62 aa6.84□□□□□ -1.31
VTI1A-202ENST00000432306 NXT1Q9UKK6 140 aaKnown RBP6.84□□□□□ -1.31
VTI1A-202ENST00000432306 IGHV5-51A0A0C4DH38 117 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 C5orf63A6NC05 138 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 H0Y980 276 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 KBTBD11O94819 623 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 IFNA1P01562 189 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 AADACP22760 399 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 PTGDSP41222 190 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 HERV-K104P61576 105 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 SRSF1Q07955 248 aaKnown RBP eCLIP6.83□□□□□ -1.32
VTI1A-202ENST00000432306 NSDHLQ15738 373 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 VAMP3Q15836 100 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 PHLDA2Q53GA4 152 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 HES3Q5TGS1 186 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 Q6ZPA2 131 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 FAM214BQ7L5A3 538 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 METTL27Q8N6F8 245 aaPredicted RBP6.83□□□□□ -1.32
VTI1A-202ENST00000432306 OR11L1Q8NGX0 322 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 LIN37Q96GY3 246 aaPredicted RBP6.83□□□□□ -1.32
VTI1A-202ENST00000432306 MS4A10Q96PG2 267 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 LRRC61Q9BV99 259 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 Q9N2K0 584 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 TIMM9Q9Y5J7 89 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 CACNA1CQ13936 2221 aa6.83□□□□□ -1.32
VTI1A-202ENST00000432306 IGLV3-12A0A075B6K2 115 aa6.82□□□□□ -1.32
VTI1A-202ENST00000432306 IGKV1-27A0A075B6S5 117 aa6.82□□□□□ -1.32
VTI1A-202ENST00000432306 MARCH11A6NNE9 402 aa6.82□□□□□ -1.32
VTI1A-202ENST00000432306 C9orf172C9J069 976 aa6.82□□□□□ -1.32
VTI1A-202ENST00000432306 PPIAL4DF5H284 164 aa6.82□□□□□ -1.32
VTI1A-202ENST00000432306 M0R135 149 aa6.82□□□□□ -1.32
VTI1A-202ENST00000432306 VENTXO95231 258 aa6.82□□□□□ -1.32
VTI1A-202ENST00000432306 HRASP01112 189 aa6.82□□□□□ -1.32
VTI1A-202ENST00000432306 IFNA5P01569 189 aa6.82□□□□□ -1.32
VTI1A-202ENST00000432306 FGF5P12034 268 aa6.82□□□□□ -1.32
VTI1A-202ENST00000432306 CD99P14209 185 aa6.82□□□□□ -1.32
VTI1A-202ENST00000432306 OPRM1P35372 400 aa6.82□□□□□ -1.32
VTI1A-202ENST00000432306 SRP14P37108 136 aaKnown RBP6.82□□□□□ -1.32
VTI1A-202ENST00000432306 RRADP55042 308 aa6.82□□□□□ -1.32
VTI1A-202ENST00000432306 DAZAP2Q15038 168 aaPredicted RBP6.82□□□□□ -1.32
VTI1A-202ENST00000432306 RNASEKQ6P5S7 137 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms