RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 SCGB2B2Q4G0G5 96 aa11.61□□□□□ -0.55
SGCE-204ENST00000428696 ACTBL2Q562R1 376 aa11.61□□□□□ -0.55
SGCE-204ENST00000428696 DHRS11Q6UWP2 260 aa11.61□□□□□ -0.55
SGCE-204ENST00000428696 Q6ZS46 218 aa11.61□□□□□ -0.55
SGCE-204ENST00000428696 BVESQ8NE79 360 aa11.61□□□□□ -0.55
SGCE-204ENST00000428696 OR6Q1Q8NGQ2 317 aa11.61□□□□□ -0.55
SGCE-204ENST00000428696 LINC01006Q8NI28 216 aa11.61□□□□□ -0.55
SGCE-204ENST00000428696 THAP7Q9BT49 309 aaPredicted RBP11.61□□□□□ -0.55
SGCE-204ENST00000428696 TINAGL1Q9GZM7 467 aaPredicted RBP11.61□□□□□ -0.55
SGCE-204ENST00000428696 BATF3Q9NR55 127 aa11.61□□□□□ -0.55
SGCE-204ENST00000428696 KIAA1456Q9P272 454 aa11.61□□□□□ -0.55
SGCE-204ENST00000428696 CLPSL1A2RUU4 121 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 OR5H14A6NHG9 310 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 M0QZK8 103 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 CTDSPLO15194 276 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 RAB3DO95716 219 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 VSIG10L2P0DP72 767 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 CNTFRP26992 372 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 THBS3P49746 956 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 TAS2R19P59542 299 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 RTL8BQ17RB0 113 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 CNPY1Q3B7I2 92 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 STEAP1BQ6NZ63 245 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 Q8N402 240 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 TMEM229BQ8NBD8 167 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 OR5AN1Q8NGI8 311 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 SMIM4Q8WVI0 70 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 TCTEX1D2Q8WW35 142 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 FLYWCH2Q96CP2 140 aaKnown RBP11.6□□□□□ -0.55
SGCE-204ENST00000428696 GAB2Q9UQC2 676 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 RBMX2Q9Y388 322 aaKnown RBP11.6□□□□□ -0.55
SGCE-204ENST00000428696 TSPAN9O75954 239 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 CSF1P09603 554 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 PGAM2P15259 253 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 INPP1P49441 399 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 EBI3Q14213 229 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 KCTD9Q7L273 389 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 CCDC190Q86UF4 302 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 C5orf30Q96GV9 206 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 ADTRPQ96IZ2 230 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 CLCC1Q96S66 551 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 SOSTQ9BQB4 213 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 ZNF702PQ9H963 129 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 PRELID3BQ9Y3B1 194 aa11.6□□□□□ -0.55
SGCE-204ENST00000428696 SHOXO15266 292 aa11.59□□□□□ -0.55
SGCE-204ENST00000428696 GSTZ1O43708 216 aaPredicted RBP11.59□□□□□ -0.55
SGCE-204ENST00000428696 FCGR3BO75015 233 aa11.59□□□□□ -0.55
SGCE-204ENST00000428696 IGKV1-16P04430 117 aa11.59□□□□□ -0.55
SGCE-204ENST00000428696 AMY2AP04746 511 aa11.59□□□□□ -0.55
SGCE-204ENST00000428696 DUTP33316 252 aaKnown RBP11.59□□□□□ -0.55
SGCE-204ENST00000428696 VDAC2P45880 294 aaPredicted RBP11.59□□□□□ -0.55
SGCE-204ENST00000428696 TMEM95Q3KNT9 176 aa11.59□□□□□ -0.55
SGCE-204ENST00000428696 FAAP20Q6NZ36 180 aa11.59□□□□□ -0.55
SGCE-204ENST00000428696 C11orf88Q6PI97 169 aa11.59□□□□□ -0.55
SGCE-204ENST00000428696 C5orf56Q8N8D9 126 aa11.59□□□□□ -0.55
SGCE-204ENST00000428696 OR8H1Q8NGG4 311 aa11.59□□□□□ -0.55
SGCE-204ENST00000428696 OR4D10Q8NGI6 311 aa11.59□□□□□ -0.55
SGCE-204ENST00000428696 C16orf95Q9H693 158 aa11.59□□□□□ -0.55
SGCE-204ENST00000428696 RANBP3Q9H6Z4 567 aaPredicted RBP11.59□□□□□ -0.55
SGCE-204ENST00000428696 PLSCR3Q9NRY6 295 aa11.59□□□□□ -0.55
SGCE-204ENST00000428696 MCUBQ9NWR8 336 aa11.59□□□□□ -0.55
SGCE-204ENST00000428696 V9GYH0 126 aa11.59□□□□□ -0.55
SGCE-204ENST00000428696 A0A1B0GUS0 222 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 LINC00854A0A1B0GVQ3 168 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 LINC00473A8K010 186 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 NBR2O15453 112 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 CRYZL1O95825 349 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 AMY1AP04745 511 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 AKAIN1P0CW23 69 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 GNRHRP30968 328 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 RPL30P62888 115 aaKnown RBP11.58□□□□□ -0.56
SGCE-204ENST00000428696 SSBP1Q04837 148 aaKnown RBP11.58□□□□□ -0.56
SGCE-204ENST00000428696 PHLDA2Q53GA4 152 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 VAX1Q5SQQ9 334 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 ZNF818PQ6ZRF7 136 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 CENPVQ7Z7K6 275 aaPredicted RBP11.58□□□□□ -0.56
SGCE-204ENST00000428696 PDPNQ86YL7 162 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 CMTM1Q8IZ96 169 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 MFSD4AQ8N468 514 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 Q8N6K4 173 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 C11orf44Q8N8P7 122 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 Q8N9W7 124 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 OR51H1Q8NH63 302 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 MOB3AQ96BX8 217 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 HSD17B10Q99714 261 aaKnown RBP11.58□□□□□ -0.56
SGCE-204ENST00000428696 FBXL15Q9H469 300 aa11.58□□□□□ -0.56
SGCE-204ENST00000428696 DISC1C4P0D8 188 aa11.57□□□□□ -0.56
SGCE-204ENST00000428696 IGLV2-14P01704 120 aa11.57□□□□□ -0.56
SGCE-204ENST00000428696 RRASP10301 218 aa11.57□□□□□ -0.56
SGCE-204ENST00000428696 TBPP20226 339 aa11.57□□□□□ -0.56
SGCE-204ENST00000428696 S100GP29377 79 aa11.57□□□□□ -0.56
SGCE-204ENST00000428696 PPP5CP53041 499 aa11.57□□□□□ -0.56
SGCE-204ENST00000428696 TAGLNQ01995 201 aaKnown RBP11.57□□□□□ -0.56
SGCE-204ENST00000428696 SRSF4Q08170 494 aaKnown RBP11.57□□□□□ -0.56
SGCE-204ENST00000428696 MEF2DQ14814 521 aa11.57□□□□□ -0.56
SGCE-204ENST00000428696 AADACL3Q5VUY0 350 aa11.57□□□□□ -0.56
SGCE-204ENST00000428696 ZNF57Q68EA5 555 aaPredicted RBP11.57□□□□□ -0.56
SGCE-204ENST00000428696 ZNF660Q6AZW8 331 aaPredicted RBP11.57□□□□□ -0.56
SGCE-204ENST00000428696 LIN54Q6MZP7 749 aa11.57□□□□□ -0.56
SGCE-204ENST00000428696 LPCAT3Q6P1A2 487 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms