RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 PDCD1Q15116 288 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 TBR1Q16650 682 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 VWC2Q2TAL6 325 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 BVES-AS1Q5T3Y7 98 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 FOXL2NBQ6ZUU3 175 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 ST6GALNAC3Q8NDV1 305 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 OR1K1Q8NGR3 316 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 OR51H1Q8NH63 302 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 OXGR1Q96P68 337 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 SF3B5Q9BWJ5 86 aaKnown RBP13.59□□□□□ -0.23
C9orf3-206ENST00000428313 KIR2DS5A0A0G2JLQ3 304 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 A0A0G2JNG1 304 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 G3V4G9 280 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 KIR2DS3K7RE56 304 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 FUT6P51993 359 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 FBXW4P57775 412 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 SELENOVP59797 346 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 RBPJQ06330 500 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 KIR2DS5Q14953 304 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 MPV17L2Q567V2 206 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 C12orf54Q6X4T0 127 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 TMEM136Q6ZRR5 245 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 ZDHHC23Q8IYP9 409 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 SCCPDHQ8NBX0 429 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 HES4Q9HCC6 221 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 COPS7AQ9UBW8 275 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 ATP23Q9Y6H3 246 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 IGKV1-6A0A0C4DH72 117 aa13.58□□□□□ -0.24
C9orf3-206ENST00000428313 SLC17A3O00476 420 aa13.58□□□□□ -0.24
C9orf3-206ENST00000428313 CD5LO43866 347 aa13.58□□□□□ -0.24
C9orf3-206ENST00000428313 PSG7Q13046 419 aa13.58□□□□□ -0.24
C9orf3-206ENST00000428313 ERASQ7Z444 233 aa13.58□□□□□ -0.24
C9orf3-206ENST00000428313 ZNF439Q8NDP4 499 aa13.58□□□□□ -0.24
C9orf3-206ENST00000428313 ST20Q9HBF5 79 aa13.58□□□□□ -0.24
C9orf3-206ENST00000428313 LRP4O75096 1905 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 C9JCJ5 164 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 M0R1X1 148 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 CLDN1O95832 211 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 LINC00869P0C866 280 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 CX3CL1P78423 397 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 PSG9Q00887 426 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 C10orf128Q5T292 105 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 OR8B3Q8NGG8 313 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 SLC37A2Q8TED4 501 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 SGCZQ96LD1 299 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 DEFB118Q96PH6 123 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 OR8B2Q96RD0 313 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 PEF1Q9UBV8 284 aaKnown RBP13.57□□□□□ -0.24
C9orf3-206ENST00000428313 OR2W1Q9Y3N9 320 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 A0A1W2PR80 420 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 H0Y8X5 98 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 HLA-DQA1P01909 254 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 FRMD6-AS1P0C7T7 363 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 IGLC1P0CG04 106 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 CD1BP29016 333 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 NHLH1Q02575 133 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 TFF3Q07654 80 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 LCN12Q6JVE5 192 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 OR10G3Q8NGC4 313 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 WASHC3Q9Y3C0 194 aa13.57□□□□□ -0.24
C9orf3-206ENST00000428313 TDRD6O60522 2096 aaKnown RBP13.57□□□□□ -0.24
C9orf3-206ENST00000428313 LOC102724200A0A096LPH7 203 aaPredicted RBP13.56□□□□□ -0.24
C9orf3-206ENST00000428313 ZNF816-ZNF321PA0A0X1KG74 233 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 K7EN84 100 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 EFNA2O43921 213 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 OR7C2O60412 319 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 SCGB1A1P11684 91 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 SRIP30626 198 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 TGFBR3Q03167 851 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 HLA-BQ31612 363 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 SLC25A53Q5H9E4 307 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 TMEM204Q9BSN7 226 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 V9GYV3 84 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 SPAG17Q6Q759 2223 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 PMS2P5A8MQ11 134 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 BMPR1BO00238 502 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 TNFSF11O14788 317 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 IGFBP7Q16270 282 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 RHBDD2Q6NTF9 364 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 PCSK4Q6UW60 755 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 FAM19A2Q8N3H0 131 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 FER1L6-AS1Q8NA97 138 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 OR2AE1Q8NHA4 323 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 NEUROG1Q92886 237 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 NABP1Q96AH0 204 aa13.56□□□□□ -0.24
C9orf3-206ENST00000428313 SCO2A0A1W2PP80 73 aa13.55□□□□□ -0.24
C9orf3-206ENST00000428313 FAM181BA6NEQ2 426 aa13.55□□□□□ -0.24
C9orf3-206ENST00000428313 SAP30O75446 220 aa13.55□□□□□ -0.24
C9orf3-206ENST00000428313 OR10J4P0C629 311 aa13.55□□□□□ -0.24
C9orf3-206ENST00000428313 RELBQ01201 579 aa13.55□□□□□ -0.24
C9orf3-206ENST00000428313 TRIM61Q5EBN2 209 aa13.55□□□□□ -0.24
C9orf3-206ENST00000428313 OR8I2Q8N0Y5 310 aa13.55□□□□□ -0.24
C9orf3-206ENST00000428313 OR1L1Q8NH94 360 aa13.55□□□□□ -0.24
C9orf3-206ENST00000428313 NINJ1Q92982 152 aa13.55□□□□□ -0.24
C9orf3-206ENST00000428313 CLUHP3Q96NS8 147 aa13.55□□□□□ -0.24
C9orf3-206ENST00000428313 EXPH5Q8NEV8 1989 aa13.55□□□□□ -0.24
C9orf3-206ENST00000428313 NUDT3O95989 172 aa13.55□□□□□ -0.24
C9orf3-206ENST00000428313 AMY1AP04745 511 aa13.55□□□□□ -0.24
C9orf3-206ENST00000428313 NTF3P20783 257 aa13.55□□□□□ -0.24
C9orf3-206ENST00000428313 CRYGSP22914 178 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms