RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 C10orf91Q5T1B1 145 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 FAM185AQ8N0U4 392 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 MDS2Q8NDY4 140 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 C10orf35Q96D05 121 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 CREBBPQ92793 2442 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 XKRY2A2RUG3 117 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 FAM157AC9JC47 383 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 M0R1X1 148 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 IFNA1P01562 189 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 IGKV1-5P01602 117 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 CD46P15529 392 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 AGAP20933 346 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 IL24Q13007 206 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 FAM122AQ96E09 287 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 TCEAL7Q9BRU2 100 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 C1QTNF5Q9BXJ0 243 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 UCP1P25874 307 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 MPV17P39210 176 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 LHX2P50458 406 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 PAX9P55771 341 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 RPL30P62888 115 aaKnown RBP11.28□□□□□ -0.6
USP42-203ENST00000426246 PMS2P11Q13670 270 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 HEPN1Q6WQI6 88 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 OR5A2Q8NGI9 324 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 OR5D13Q8NGL4 314 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 SELLP14151 372 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 GCH1P30793 250 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 ARR3P36575 388 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 ZNF83P51522 516 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 ID3Q02535 119 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 SERTAD4Q9NUC0 356 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 ZNF391Q9UJN7 358 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 RPH3ALQ9UNE2 315 aa11.28□□□□□ -0.6
USP42-203ENST00000426246 HAND1O96004 215 aa11.27□□□□□ -0.6
USP42-203ENST00000426246 IGLV3-1P01715 115 aa11.27□□□□□ -0.6
USP42-203ENST00000426246 GALR1P47211 349 aa11.27□□□□□ -0.6
USP42-203ENST00000426246 CLDN18P56856 261 aa11.27□□□□□ -0.6
USP42-203ENST00000426246 S100A12P80511 92 aa11.27□□□□□ -0.6
USP42-203ENST00000426246 SSX2Q16385 188 aa11.27□□□□□ -0.6
USP42-203ENST00000426246 NMSQ5H8A3 153 aa11.27□□□□□ -0.6
USP42-203ENST00000426246 RNFT1Q5M7Z0 435 aa11.27□□□□□ -0.6
USP42-203ENST00000426246 UNQ6494/PRO21346Q6UXR6 183 aa11.27□□□□□ -0.6
USP42-203ENST00000426246 ABHD12Q8N2K0 398 aa11.27□□□□□ -0.6
USP42-203ENST00000426246 FAM103A1Q9BTL3 118 aaKnown RBP11.27□□□□□ -0.6
USP42-203ENST00000426246 DERL1Q9BUN8 251 aa11.27□□□□□ -0.6
USP42-203ENST00000426246 GRIFINA4D1Z8 144 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 KLRC4-KLRK1H3BQV0 150 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 IGKV1-39P01597 117 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 IGKV1D-39P04432 117 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 CTXN2P0C2S0 81 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 CEACAM1P13688 526 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 TCL1AP56279 114 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 HIST1H3AP68431 136 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 ZNRF1Q8ND25 227 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 OR5P3Q8WZ94 311 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 POM121L2Q96KW2 1035 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 UBE2CO00762 179 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 HBZP02008 142 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 P2RY6Q15077 328 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 BSXQ3C1V8 233 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 PCSK4Q6UW60 755 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 LHFPL4Q7Z7J7 247 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 EDARADDQ8WWZ3 215 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 FER1L6-AS2Q96M78 137 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 RAB40CQ96S21 281 aa11.27□□□□□ -0.61
USP42-203ENST00000426246 LIN7CQ9NUP9 197 aaKnown RBP11.27□□□□□ -0.61
USP42-203ENST00000426246 METTL1Q9UBP6 276 aaKnown RBP11.27□□□□□ -0.61
USP42-203ENST00000426246 H0Y980 276 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 DNPH1O43598 174 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 TMEM241Q24JQ0 296 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 ZCCHC24Q8N2G6 241 aaKnown RBP11.26□□□□□ -0.61
USP42-203ENST00000426246 DTD1Q8TEA8 209 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 NANOS1Q8WY41 292 aaKnown RBP11.26□□□□□ -0.61
USP42-203ENST00000426246 IL22RA2Q969J5 263 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 ATG101Q9BSB4 218 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 NDUFB4O95168 129 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 MYOD1P15172 320 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 RPP25LQ8N5L8 163 aaKnown RBP11.26□□□□□ -0.61
USP42-203ENST00000426246 TAF15Q92804 592 aaKnown RBP eCLIP11.26□□□□□ -0.61
USP42-203ENST00000426246 RAB24Q969Q5 203 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 OR51M1Q9H341 326 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.26□□□□□ -0.61
USP42-203ENST00000426246 A0A087X0M5 115 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 A0A1B0GX30 115 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 NAPSAO96009 420 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 PSG7Q13046 419 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 RPL39P5Q59GN2 51 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 ZNF766Q5HY98 468 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 TMEM42Q69YG0 159 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 TCF23Q7RTU1 214 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 ASCL5Q7RTU5 278 aa11.26□□□□□ -0.61
USP42-203ENST00000426246 CHD8Q9HCK8 2581 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 C12orf77C9JDV5 145 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 IGKV1D-33P01593 117 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 IGKV1-33P01594 117 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 GPR12P47775 334 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 ZNF726P1Q15940 193 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 RIPPLY2Q5TAB7 128 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 ABLIM2Q6H8Q1 611 aa11.25□□□□□ -0.61
USP42-203ENST00000426246 VWA1Q6PCB0 445 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms