RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 F2RL1P55085 397 aa17.24■□□□□ 0.35
SEC22C-207ENST00000423701 HERV-K104P61576 105 aa17.24■□□□□ 0.35
SEC22C-207ENST00000423701 SSBP1Q04837 148 aaKnown RBP17.24■□□□□ 0.35
SEC22C-207ENST00000423701 VAX1Q5SQQ9 334 aa17.24■□□□□ 0.35
SEC22C-207ENST00000423701 TMEM17Q86X19 198 aa17.24■□□□□ 0.35
SEC22C-207ENST00000423701 Q8N9W7 124 aa17.24■□□□□ 0.35
SEC22C-207ENST00000423701 OR8H1Q8NGG4 311 aa17.24■□□□□ 0.35
SEC22C-207ENST00000423701 OR6Q1Q8NGQ2 317 aa17.24■□□□□ 0.35
SEC22C-207ENST00000423701 SPATA3Q8NHX4 192 aa17.24■□□□□ 0.35
SEC22C-207ENST00000423701 RITA1Q96K30 269 aa17.24■□□□□ 0.35
SEC22C-207ENST00000423701 RNF114Q9Y508 228 aa17.24■□□□□ 0.35
SEC22C-207ENST00000423701 TENM1Q9UKZ4 2725 aa17.23■□□□□ 0.35
SEC22C-207ENST00000423701 GSTZ1O43708 216 aaPredicted RBP17.23■□□□□ 0.35
SEC22C-207ENST00000423701 APOA2P02652 100 aa17.23■□□□□ 0.35
SEC22C-207ENST00000423701 CD3DP04234 171 aa17.23■□□□□ 0.35
SEC22C-207ENST00000423701 THBS3P49746 956 aa17.23■□□□□ 0.35
SEC22C-207ENST00000423701 MMDQ15546 238 aa17.23■□□□□ 0.35
SEC22C-207ENST00000423701 OR6F1Q8NGZ6 308 aa17.23■□□□□ 0.35
SEC22C-207ENST00000423701 MOB3AQ96BX8 217 aa17.23■□□□□ 0.35
SEC22C-207ENST00000423701 SLC5A7Q9GZV3 580 aa17.23■□□□□ 0.35
SEC22C-207ENST00000423701 CCL28Q9NRJ3 127 aa17.23■□□□□ 0.35
SEC22C-207ENST00000423701 LINC00473A8K010 186 aa17.22■□□□□ 0.35
SEC22C-207ENST00000423701 IGKV1-16P04430 117 aa17.22■□□□□ 0.35
SEC22C-207ENST00000423701 TBPP20226 339 aa17.22■□□□□ 0.35
SEC22C-207ENST00000423701 CNTFRP26992 372 aa17.22■□□□□ 0.35
SEC22C-207ENST00000423701 PROK1P58294 105 aa17.22■□□□□ 0.35
SEC22C-207ENST00000423701 TAS2R19P59542 299 aa17.22■□□□□ 0.35
SEC22C-207ENST00000423701 TSPAN5P62079 268 aa17.22■□□□□ 0.35
SEC22C-207ENST00000423701 ZNF79Q15937 498 aa17.22■□□□□ 0.35
SEC22C-207ENST00000423701 RNASE10Q5GAN6 216 aaKnown RBP17.22■□□□□ 0.35
SEC22C-207ENST00000423701 PDPNQ86YL7 162 aa17.22■□□□□ 0.35
SEC22C-207ENST00000423701 FAM71E2Q8N5Q1 922 aa17.22■□□□□ 0.35
SEC22C-207ENST00000423701 TMEM229BQ8NBD8 167 aa17.22■□□□□ 0.35
SEC22C-207ENST00000423701 DDB2Q92466 427 aa17.22■□□□□ 0.35
SEC22C-207ENST00000423701 ADTRPQ96IZ2 230 aa17.22■□□□□ 0.35
SEC22C-207ENST00000423701 TINAGL1Q9GZM7 467 aaPredicted RBP17.22■□□□□ 0.35
SEC22C-207ENST00000423701 FXYD6Q9H0Q3 95 aa17.22■□□□□ 0.35
SEC22C-207ENST00000423701 SLC35D1Q9NTN3 355 aa17.22■□□□□ 0.35
SEC22C-207ENST00000423701 ZNF107Q9UII5 783 aaPredicted RBP17.22■□□□□ 0.35
SEC22C-207ENST00000423701 EIF4EBP1Q13541 118 aaPredicted RBP17.21■□□□□ 0.35
SEC22C-207ENST00000423701 MSMO1Q15800 293 aa17.21■□□□□ 0.35
SEC22C-207ENST00000423701 TMEM95Q3KNT9 176 aa17.21■□□□□ 0.35
SEC22C-207ENST00000423701 SERTAD4Q9NUC0 356 aa17.21■□□□□ 0.35
SEC22C-207ENST00000423701 NBR2O15453 112 aa17.2■□□□□ 0.34
SEC22C-207ENST00000423701 CD74P04233 296 aa17.2■□□□□ 0.34
SEC22C-207ENST00000423701 ETV6P41212 452 aa17.2■□□□□ 0.34
SEC22C-207ENST00000423701 ARSJQ5FYB0 599 aaPredicted RBP17.2■□□□□ 0.34
SEC22C-207ENST00000423701 C9orf152Q5JTZ5 239 aa17.2■□□□□ 0.34
SEC22C-207ENST00000423701 SPANXN2Q5MJ10 180 aa17.2■□□□□ 0.34
SEC22C-207ENST00000423701 KCTD9Q7L273 389 aa17.2■□□□□ 0.34
SEC22C-207ENST00000423701 C3orf56Q8N813 242 aa17.2■□□□□ 0.34
SEC22C-207ENST00000423701 OR4D10Q8NGI6 311 aa17.2■□□□□ 0.34
SEC22C-207ENST00000423701 WFDC12Q8WWY7 111 aa17.2■□□□□ 0.34
SEC22C-207ENST00000423701 LIN7CQ9NUP9 197 aaKnown RBP17.2■□□□□ 0.34
SEC22C-207ENST00000423701 TAS2R8Q9NYW2 309 aa17.2■□□□□ 0.34
SEC22C-207ENST00000423701 STAB1Q9NY15 2570 aa17.2■□□□□ 0.34
SEC22C-207ENST00000423701 CSF1P09603 554 aa17.19■□□□□ 0.34
SEC22C-207ENST00000423701 PTBP1P26599 531 aaKnown RBP eCLIP17.19■□□□□ 0.34
SEC22C-207ENST00000423701 RPL30P62888 115 aaKnown RBP17.19■□□□□ 0.34
SEC22C-207ENST00000423701 TAGLNQ01995 201 aaKnown RBP17.19■□□□□ 0.34
SEC22C-207ENST00000423701 CNPY1Q3B7I2 92 aa17.19■□□□□ 0.34
SEC22C-207ENST00000423701 PYDC2Q56P42 97 aa17.19■□□□□ 0.34
SEC22C-207ENST00000423701 STEAP1BQ6NZ63 245 aa17.19■□□□□ 0.34
SEC22C-207ENST00000423701 ZNF818PQ6ZRF7 136 aa17.19■□□□□ 0.34
SEC22C-207ENST00000423701 BVESQ8NE79 360 aa17.19■□□□□ 0.34
SEC22C-207ENST00000423701 GPHA2Q96T91 129 aa17.19■□□□□ 0.34
SEC22C-207ENST00000423701 HSD17B10Q99714 261 aaKnown RBP17.19■□□□□ 0.34
SEC22C-207ENST00000423701 BATF3Q9NR55 127 aa17.19■□□□□ 0.34
SEC22C-207ENST00000423701 HAX1O00165 279 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 TNFSF12O43508 249 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 PEX14O75381 377 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 NDUFA3O95167 84 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 RAB3DO95716 219 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 IFNA6P05013 189 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 GNRHRP30968 328 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 VDAC2P45880 294 aaPredicted RBP17.18■□□□□ 0.34
SEC22C-207ENST00000423701 RTL8BQ17RB0 113 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 ARRDC1Q8N5I2 433 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 ZBTB34Q8NCN2 500 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 NPBQ8NG41 125 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 FLYWCH2Q96CP2 140 aaKnown RBP17.18■□□□□ 0.34
SEC22C-207ENST00000423701 RNF5Q99942 180 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 RASL11BQ9BPW5 248 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 RRASP10301 218 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 AADACL3Q5VUY0 350 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 FAAP20Q6NZ36 180 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 ZNF66Q6ZN08 573 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 Q8N402 240 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 TRIM63Q969Q1 353 aa17.18■□□□□ 0.34
SEC22C-207ENST00000423701 THAP7Q9BT49 309 aaPredicted RBP17.18■□□□□ 0.34
SEC22C-207ENST00000423701 DNHD1Q96M86 4753 aa17.17■□□□□ 0.34
SEC22C-207ENST00000423701 ANKRD20A5PA0PJZ0 165 aa17.17■□□□□ 0.34
SEC22C-207ENST00000423701 RPS16P62249 146 aaKnown RBP17.17■□□□□ 0.34
SEC22C-207ENST00000423701 CBX3Q13185 183 aa17.17■□□□□ 0.34
SEC22C-207ENST00000423701 OR2B11Q5JQS5 317 aa17.17■□□□□ 0.34
SEC22C-207ENST00000423701 LHFPL1Q86WI0 220 aa17.17■□□□□ 0.34
SEC22C-207ENST00000423701 MFSD4AQ8N468 514 aa17.17■□□□□ 0.34
SEC22C-207ENST00000423701 TCTEX1D2Q8WW35 142 aa17.17■□□□□ 0.34
SEC22C-207ENST00000423701 BORCS5Q969J3 196 aa17.17■□□□□ 0.34
SEC22C-207ENST00000423701 ZNF747Q9BV97 191 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms