RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 FAM90A26D6RGX4 464 aa13.22□□□□□ -0.29
CDH1-202ENST00000422392 IFNA1P01562 189 aa13.22□□□□□ -0.29
CDH1-202ENST00000422392 P0C879 139 aa13.22□□□□□ -0.29
CDH1-202ENST00000422392 FFAR4Q5NUL3 377 aa13.22□□□□□ -0.29
CDH1-202ENST00000422392 CNEP1R1Q8N9A8 125 aa13.22□□□□□ -0.29
CDH1-202ENST00000422392 OR10G9Q8NGN4 311 aa13.22□□□□□ -0.29
CDH1-202ENST00000422392 OR10G7Q8NGN6 311 aa13.22□□□□□ -0.29
CDH1-202ENST00000422392 DTD1Q8TEA8 209 aa13.22□□□□□ -0.29
CDH1-202ENST00000422392 ELOVL1Q9BW60 279 aa13.22□□□□□ -0.29
CDH1-202ENST00000422392 ST8SIA5O15466 376 aa13.22□□□□□ -0.29
CDH1-202ENST00000422392 PTBP3O95758 552 aaKnown RBP13.22□□□□□ -0.29
CDH1-202ENST00000422392 ZNF883P0CG24 379 aa13.22□□□□□ -0.29
CDH1-202ENST00000422392 EIF4EBP1Q13541 118 aaPredicted RBP13.22□□□□□ -0.29
CDH1-202ENST00000422392 OR4F5Q8NH21 305 aa13.22□□□□□ -0.29
CDH1-202ENST00000422392 NINJ1Q92982 152 aa13.22□□□□□ -0.29
CDH1-202ENST00000422392 OR4F4Q96R69 305 aa13.22□□□□□ -0.29
CDH1-202ENST00000422392 HES4Q9HCC6 221 aa13.22□□□□□ -0.29
CDH1-202ENST00000422392 NAT8Q9UHE5 227 aa13.22□□□□□ -0.29
CDH1-202ENST00000422392 GAB2Q9UQC2 676 aa13.22□□□□□ -0.29
CDH1-202ENST00000422392 DCHS1Q96JQ0 3298 aa13.21□□□□□ -0.29
CDH1-202ENST00000422392 LY86O95711 162 aa13.21□□□□□ -0.29
CDH1-202ENST00000422392 OR5T1Q8NG75 326 aa13.21□□□□□ -0.29
CDH1-202ENST00000422392 OR13A1Q8NGR1 328 aa13.21□□□□□ -0.29
CDH1-202ENST00000422392 PARLQ9H300 379 aa13.21□□□□□ -0.29
CDH1-202ENST00000422392 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.21□□□□□ -0.29
CDH1-202ENST00000422392 TRBV24-1A0A075B6N3 115 aa13.21□□□□□ -0.3
CDH1-202ENST00000422392 OOEPA6NGQ2 149 aa13.21□□□□□ -0.3
CDH1-202ENST00000422392 IGHV3-13P01766 116 aa13.21□□□□□ -0.3
CDH1-202ENST00000422392 IGHV3-7P01780 117 aa13.21□□□□□ -0.3
CDH1-202ENST00000422392 GZMHP20718 246 aa13.21□□□□□ -0.3
CDH1-202ENST00000422392 FABP6P51161 128 aa13.21□□□□□ -0.3
CDH1-202ENST00000422392 RPL23P62829 140 aaKnown RBP13.21□□□□□ -0.3
CDH1-202ENST00000422392 MSMO1Q15800 293 aa13.21□□□□□ -0.3
CDH1-202ENST00000422392 TMEM241Q24JQ0 296 aa13.21□□□□□ -0.3
CDH1-202ENST00000422392 Q3ZCU0 254 aa13.21□□□□□ -0.3
CDH1-202ENST00000422392 OR10P1Q8NGE3 313 aa13.21□□□□□ -0.3
CDH1-202ENST00000422392 GMPPAQ96IJ6 420 aaPredicted RBP13.21□□□□□ -0.3
CDH1-202ENST00000422392 FER1L6-AS2Q96M78 137 aa13.21□□□□□ -0.3
CDH1-202ENST00000422392 TRIB1Q96RU8 372 aa13.21□□□□□ -0.3
CDH1-202ENST00000422392 NPCDR1Q9BY65 106 aa13.21□□□□□ -0.3
CDH1-202ENST00000422392 PARD6GQ9BYG4 376 aaPredicted RBP13.21□□□□□ -0.3
CDH1-202ENST00000422392 PRDM13Q9H4Q3 707 aa13.21□□□□□ -0.3
CDH1-202ENST00000422392 CDX4O14627 284 aaPredicted RBP13.2□□□□□ -0.3
CDH1-202ENST00000422392 OPN1MWP04001 364 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 OPN1MW2P0DN77 364 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 OPN1MW3P0DN78 364 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 PSMB3P49720 205 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 TGFBR3Q03167 851 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 GABRA6Q16445 453 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 HES3Q5TGS1 186 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 CYP2G1PQ6ZSU1 146 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 OR4X1Q8NH49 305 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 TMEM147Q9BVK8 224 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 PSG11Q9UQ72 335 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 MGAQ8IWI9 3026 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 GALR2O43603 387 aaPredicted RBP13.2□□□□□ -0.3
CDH1-202ENST00000422392 KBTBD11O94819 623 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 COL10A1Q03692 680 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 CATR1Q13166 79 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 GAMTQ14353 236 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 BSXQ3C1V8 233 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 ACSF3Q4G176 576 aaPredicted RBP13.2□□□□□ -0.3
CDH1-202ENST00000422392 GCSAMLQ5JQS6 135 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 FIP1L1Q6UN15 594 aaKnown RBP13.2□□□□□ -0.3
CDH1-202ENST00000422392 ACP7Q6ZNF0 438 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 H2BFWTQ7Z2G1 175 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 RAB24Q969Q5 203 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 RHOVQ96L33 236 aa13.2□□□□□ -0.3
CDH1-202ENST00000422392 ZMAT5Q9UDW3 170 aaKnown RBP13.2□□□□□ -0.3
CDH1-202ENST00000422392 CTXND1A0A1B0GTU2 59 aa13.19□□□□□ -0.3
CDH1-202ENST00000422392 PAGE4O60829 102 aa13.19□□□□□ -0.3
CDH1-202ENST00000422392 EDDM3AQ14507 147 aa13.19□□□□□ -0.3
CDH1-202ENST00000422392 SLC35E4Q6ICL7 350 aa13.19□□□□□ -0.3
CDH1-202ENST00000422392 VWA1Q6PCB0 445 aa13.19□□□□□ -0.3
CDH1-202ENST00000422392 WDR82Q6UXN9 313 aa13.19□□□□□ -0.3
CDH1-202ENST00000422392 SSX9Q7RTT3 188 aa13.19□□□□□ -0.3
CDH1-202ENST00000422392 OR10A7Q8NGE5 316 aa13.19□□□□□ -0.3
CDH1-202ENST00000422392 ZDHHC11Q9H8X9 412 aa13.19□□□□□ -0.3
CDH1-202ENST00000422392 AURKAIP1Q9NWT8 199 aaPredicted RBP13.19□□□□□ -0.3
CDH1-202ENST00000422392 LAMP3Q9UQV4 416 aa13.19□□□□□ -0.3
CDH1-202ENST00000422392 TIMM9Q9Y5J7 89 aa13.19□□□□□ -0.3
CDH1-202ENST00000422392 PFN1P07737 140 aaKnown RBP13.19□□□□□ -0.3
CDH1-202ENST00000422392 EGR1P18146 543 aa13.19□□□□□ -0.3
CDH1-202ENST00000422392 SRSF6Q13247 344 aaKnown RBP13.19□□□□□ -0.3
CDH1-202ENST00000422392 CENPVQ7Z7K6 275 aaPredicted RBP13.19□□□□□ -0.3
CDH1-202ENST00000422392 FAM234AQ9H0X4 552 aa13.19□□□□□ -0.3
CDH1-202ENST00000422392 RP1L1Q8IWN7 2480 aaPredicted RBP13.18□□□□□ -0.3
CDH1-202ENST00000422392 ELOA3CA0A087WX78 387 aaPredicted RBP13.18□□□□□ -0.3
CDH1-202ENST00000422392 ZNF729A6NN14 1252 aaPredicted RBP13.18□□□□□ -0.3
CDH1-202ENST00000422392 C1QTNF9BB2RNN3 333 aa13.18□□□□□ -0.3
CDH1-202ENST00000422392 SOX8P57073 446 aa13.18□□□□□ -0.3
CDH1-202ENST00000422392 PACRGQ96M98 296 aaPredicted RBP13.18□□□□□ -0.3
CDH1-202ENST00000422392 QTRT1Q9BXR0 403 aaKnown RBP13.18□□□□□ -0.3
CDH1-202ENST00000422392 CTDSP1Q9GZU7 261 aa13.18□□□□□ -0.3
CDH1-202ENST00000422392 A0A1W2PPQ1 181 aa13.18□□□□□ -0.3
CDH1-202ENST00000422392 TMEM210A6NLX4 147 aa13.18□□□□□ -0.3
CDH1-202ENST00000422392 MARCH11A6NNE9 402 aa13.18□□□□□ -0.3
CDH1-202ENST00000422392 J3QW42 95 aa13.18□□□□□ -0.3
CDH1-202ENST00000422392 TIMM8AO60220 97 aaPredicted RBP13.18□□□□□ -0.3
CDH1-202ENST00000422392 NDUFS6O75380 124 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms