RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 ZNF260Q3ZCT1 412 aa17.15■□□□□ 0.34
TRAF4-204ENST00000422344 ZNF660Q6AZW8 331 aaPredicted RBP17.15■□□□□ 0.34
TRAF4-204ENST00000422344 ETV3LQ6ZN32 361 aa17.15■□□□□ 0.34
TRAF4-204ENST00000422344 CROCCP3Q8IVE0 287 aa17.15■□□□□ 0.34
TRAF4-204ENST00000422344 MRPL41Q8IXM3 137 aaKnown RBP17.15■□□□□ 0.34
TRAF4-204ENST00000422344 H1FOOQ8IZA3 346 aaPredicted RBP17.15■□□□□ 0.34
TRAF4-204ENST00000422344 RNF152Q8N8N0 203 aa17.15■□□□□ 0.34
TRAF4-204ENST00000422344 AURKAIP1Q9NWT8 199 aaPredicted RBP17.15■□□□□ 0.34
TRAF4-204ENST00000422344 KMT2CQ8NEZ4 4911 aaKnown RBP17.14■□□□□ 0.33
TRAF4-204ENST00000422344 TRAV18A0A075B6X5 111 aa17.14■□□□□ 0.33
TRAF4-204ENST00000422344 G3V318 75 aa17.14■□□□□ 0.33
TRAF4-204ENST00000422344 SPDEFO95238 335 aa17.14■□□□□ 0.33
TRAF4-204ENST00000422344 IGKV1-16P04430 117 aa17.14■□□□□ 0.33
TRAF4-204ENST00000422344 CDX1P47902 265 aaPredicted RBP17.14■□□□□ 0.33
TRAF4-204ENST00000422344 LINC00205P59089 165 aa17.14■□□□□ 0.33
TRAF4-204ENST00000422344 CX3CL1P78423 397 aa17.14■□□□□ 0.33
TRAF4-204ENST00000422344 PSG5Q15238 335 aa17.14■□□□□ 0.33
TRAF4-204ENST00000422344 ECSCRQ19T08 205 aa17.14■□□□□ 0.33
TRAF4-204ENST00000422344 YIPF6Q96EC8 236 aa17.14■□□□□ 0.33
TRAF4-204ENST00000422344 CLCC1Q96S66 551 aa17.14■□□□□ 0.33
TRAF4-204ENST00000422344 GPR61Q9BZJ8 451 aa17.14■□□□□ 0.33
TRAF4-204ENST00000422344 DIABLOQ9NR28 239 aa17.14■□□□□ 0.33
TRAF4-204ENST00000422344 A0A0A6YYH2 397 aa17.13■□□□□ 0.33
TRAF4-204ENST00000422344 A6NJ64 397 aa17.13■□□□□ 0.33
TRAF4-204ENST00000422344 PSMB8P28062 276 aa17.13■□□□□ 0.33
TRAF4-204ENST00000422344 RAB25P57735 213 aa17.13■□□□□ 0.33
TRAF4-204ENST00000422344 LSM3P62310 102 aaKnown RBP17.13■□□□□ 0.33
TRAF4-204ENST00000422344 TAGLNQ01995 201 aaKnown RBP17.13■□□□□ 0.33
TRAF4-204ENST00000422344 RTL8BQ17RB0 113 aa17.13■□□□□ 0.33
TRAF4-204ENST00000422344 SLC25A38Q96DW6 304 aa17.13■□□□□ 0.33
TRAF4-204ENST00000422344 A3GALT2U3KPV4 340 aa17.13■□□□□ 0.33
TRAF4-204ENST00000422344 CCL24O00175 119 aa17.12■□□□□ 0.33
TRAF4-204ENST00000422344 PPIFP30405 207 aaKnown RBP17.12■□□□□ 0.33
TRAF4-204ENST00000422344 TMEM267Q0VDI3 215 aaPredicted RBP17.12■□□□□ 0.33
TRAF4-204ENST00000422344 FOXB2Q5VYV0 432 aa17.12■□□□□ 0.33
TRAF4-204ENST00000422344 CNIH2Q6PI25 160 aa17.12■□□□□ 0.33
TRAF4-204ENST00000422344 DPF1Q92782 380 aa17.12■□□□□ 0.33
TRAF4-204ENST00000422344 RAX2Q96IS3 184 aa17.12■□□□□ 0.33
TRAF4-204ENST00000422344 ADTRPQ96IZ2 230 aa17.12■□□□□ 0.33
TRAF4-204ENST00000422344 DUX3Q96PT4 197 aa17.12■□□□□ 0.33
TRAF4-204ENST00000422344 P2RX4Q99571 388 aa17.12■□□□□ 0.33
TRAF4-204ENST00000422344 MCRIP2Q9BUT9 160 aaKnown RBP17.12■□□□□ 0.33
TRAF4-204ENST00000422344 SPATA2Q9UM82 520 aa17.12■□□□□ 0.33
TRAF4-204ENST00000422344 J3QRK9 145 aa17.11■□□□□ 0.33
TRAF4-204ENST00000422344 FCN1O00602 326 aa17.11■□□□□ 0.33
TRAF4-204ENST00000422344 SLC25A17O43808 307 aa17.11■□□□□ 0.33
TRAF4-204ENST00000422344 SSX5O60225 188 aa17.11■□□□□ 0.33
TRAF4-204ENST00000422344 RRASP10301 218 aa17.11■□□□□ 0.33
TRAF4-204ENST00000422344 TGFBR1P36897 503 aa17.11■□□□□ 0.33
TRAF4-204ENST00000422344 LGALS7P47929 136 aa17.11■□□□□ 0.33
TRAF4-204ENST00000422344 LUMP51884 338 aaPredicted RBP17.11■□□□□ 0.33
TRAF4-204ENST00000422344 NDPQ00604 133 aa17.11■□□□□ 0.33
TRAF4-204ENST00000422344 TCTEX1D1Q8N7M0 179 aa17.11■□□□□ 0.33
TRAF4-204ENST00000422344 C4orf3Q8WVX3 66 aa17.11■□□□□ 0.33
TRAF4-204ENST00000422344 ANXA10Q9UJ72 324 aa17.11■□□□□ 0.33
TRAF4-204ENST00000422344 OR2W1Q9Y3N9 320 aa17.11■□□□□ 0.33
TRAF4-204ENST00000422344 A0A1W2PN81 502 aa17.1■□□□□ 0.33
TRAF4-204ENST00000422344 CA2P00918 260 aa17.1■□□□□ 0.33
TRAF4-204ENST00000422344 NFYAP23511 347 aaPredicted RBP17.1■□□□□ 0.33
TRAF4-204ENST00000422344 CHRNA7P36544 502 aa17.1■□□□□ 0.33
TRAF4-204ENST00000422344 ARPC4P59998 168 aa17.1■□□□□ 0.33
TRAF4-204ENST00000422344 DEFB136Q30KP8 78 aa17.1■□□□□ 0.33
TRAF4-204ENST00000422344 ZNF562Q6V9R5 426 aa17.1■□□□□ 0.33
TRAF4-204ENST00000422344 PPP1R27Q86WC6 154 aa17.1■□□□□ 0.33
TRAF4-204ENST00000422344 BVESQ8NE79 360 aa17.1■□□□□ 0.33
TRAF4-204ENST00000422344 HARBI1Q96MB7 349 aa17.1■□□□□ 0.33
TRAF4-204ENST00000422344 FOXA2Q9Y261 457 aaPredicted RBP17.1■□□□□ 0.33
TRAF4-204ENST00000422344 FBXO7Q9Y3I1 522 aa17.1■□□□□ 0.33
TRAF4-204ENST00000422344 SHOXO15266 292 aa17.09■□□□□ 0.33
TRAF4-204ENST00000422344 IGLV1-40P01703 118 aa17.09■□□□□ 0.33
TRAF4-204ENST00000422344 RPS19P39019 145 aaKnown RBP17.09■□□□□ 0.33
TRAF4-204ENST00000422344 CRIP2P52943 208 aaPredicted RBP17.09■□□□□ 0.33
TRAF4-204ENST00000422344 ZNF645Q8N7E2 425 aa17.09■□□□□ 0.33
TRAF4-204ENST00000422344 MINDY2Q8NBR6 621 aa17.09■□□□□ 0.33
TRAF4-204ENST00000422344 S100A16Q96FQ6 103 aaKnown RBP17.09■□□□□ 0.33
TRAF4-204ENST00000422344 C5orf30Q96GV9 206 aa17.09■□□□□ 0.33
TRAF4-204ENST00000422344 UBE2E2Q96LR5 201 aa17.09■□□□□ 0.33
TRAF4-204ENST00000422344 KLK15Q9H2R5 256 aa17.09■□□□□ 0.33
TRAF4-204ENST00000422344 VSIG4Q9Y279 399 aa17.09■□□□□ 0.33
TRAF4-204ENST00000422344 COL7A1Q02388 2944 aa17.09■□□□□ 0.33
TRAF4-204ENST00000422344 SLC22A5O76082 557 aa17.08■□□□□ 0.32
TRAF4-204ENST00000422344 CNIH1O95406 144 aa17.08■□□□□ 0.32
TRAF4-204ENST00000422344 DUTP33316 252 aaKnown RBP17.08■□□□□ 0.32
TRAF4-204ENST00000422344 UNQ5815/PRO19632Q6UWF5 114 aa17.08■□□□□ 0.32
TRAF4-204ENST00000422344 BEST4Q8NFU0 473 aa17.08■□□□□ 0.32
TRAF4-204ENST00000422344 ARPC1AQ92747 370 aa17.08■□□□□ 0.32
TRAF4-204ENST00000422344 FAM103A1Q9BTL3 118 aaKnown RBP17.08■□□□□ 0.32
TRAF4-204ENST00000422344 AUNIPQ9H7T9 357 aa17.08■□□□□ 0.32
TRAF4-204ENST00000422344 TRIM64CA6NLI5 447 aa17.07■□□□□ 0.32
TRAF4-204ENST00000422344 CD40LGP29965 261 aa17.07■□□□□ 0.32
TRAF4-204ENST00000422344 RAB9AP51151 201 aa17.07■□□□□ 0.32
TRAF4-204ENST00000422344 GNB1P62873 340 aa17.07■□□□□ 0.32
TRAF4-204ENST00000422344 FXYD3Q14802 87 aa17.07■□□□□ 0.32
TRAF4-204ENST00000422344 TMEM177Q53S58 311 aa17.07■□□□□ 0.32
TRAF4-204ENST00000422344 ACTBL2Q562R1 376 aa17.07■□□□□ 0.32
TRAF4-204ENST00000422344 UBE2NLQ5JXB2 153 aa17.07■□□□□ 0.32
TRAF4-204ENST00000422344 ZNF491Q8N8L2 437 aa17.07■□□□□ 0.32
TRAF4-204ENST00000422344 OR5M8Q8NGP6 311 aa17.07■□□□□ 0.32
TRAF4-204ENST00000422344 GRPEL2Q8TAA5 225 aa17.07■□□□□ 0.32
TRAF4-204ENST00000422344 MYOZ3Q8TDC0 251 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms