RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 NOTCH3Q9UM47 2321 aa20.72■□□□□ 0.91
CDK9-202ENST00000421939 PLXNB1O43157 2135 aa20.72■□□□□ 0.91
CDK9-202ENST00000421939 IGHG4P01861 327 aa20.71■□□□□ 0.91
CDK9-202ENST00000421939 LUMP51884 338 aaPredicted RBP20.71■□□□□ 0.91
CDK9-202ENST00000421939 ARPC4P59998 168 aa20.71■□□□□ 0.91
CDK9-202ENST00000421939 RPS16P62249 146 aaKnown RBP20.71■□□□□ 0.91
CDK9-202ENST00000421939 NDPQ00604 133 aa20.71■□□□□ 0.91
CDK9-202ENST00000421939 TAGLNQ01995 201 aaKnown RBP20.71■□□□□ 0.91
CDK9-202ENST00000421939 PSG5Q15238 335 aa20.71■□□□□ 0.91
CDK9-202ENST00000421939 CTF1Q16619 201 aa20.71■□□□□ 0.91
CDK9-202ENST00000421939 CXorf66Q5JRM2 361 aaPredicted RBP20.71■□□□□ 0.91
CDK9-202ENST00000421939 TMEM69Q5SWH9 247 aa20.71■□□□□ 0.91
CDK9-202ENST00000421939 C1QL4Q86Z23 238 aa20.71■□□□□ 0.91
CDK9-202ENST00000421939 METTL1Q9UBP6 276 aaKnown RBP20.71■□□□□ 0.91
CDK9-202ENST00000421939 J3QRK9 145 aa20.7■□□□□ 0.9
CDK9-202ENST00000421939 HLA-DQB1P01920 261 aa20.7■□□□□ 0.9
CDK9-202ENST00000421939 ELANEP08246 267 aa20.7■□□□□ 0.9
CDK9-202ENST00000421939 CBX5P45973 191 aa20.7■□□□□ 0.9
CDK9-202ENST00000421939 GPR107Q5VW38 600 aa20.7■□□□□ 0.9
CDK9-202ENST00000421939 ZNF645Q8N7E2 425 aa20.7■□□□□ 0.9
CDK9-202ENST00000421939 RNF152Q8N8N0 203 aa20.7■□□□□ 0.9
CDK9-202ENST00000421939 ADTRPQ96IZ2 230 aa20.7■□□□□ 0.9
CDK9-202ENST00000421939 WSB1Q9Y6I7 421 aa20.7■□□□□ 0.9
CDK9-202ENST00000421939 NUDT19A8MXV4 375 aa20.69■□□□□ 0.9
CDK9-202ENST00000421939 G3V4G9 280 aa20.69■□□□□ 0.9
CDK9-202ENST00000421939 TUSC2O75896 110 aa20.69■□□□□ 0.9
CDK9-202ENST00000421939 RPLP1P05386 114 aaKnown RBP20.69■□□□□ 0.9
CDK9-202ENST00000421939 SLC6A1P30531 599 aa20.69■□□□□ 0.9
CDK9-202ENST00000421939 DUTP33316 252 aaKnown RBP20.69■□□□□ 0.9
CDK9-202ENST00000421939 ALDH3B2P48448 385 aa20.69■□□□□ 0.9
CDK9-202ENST00000421939 TAS2R20P59543 309 aa20.69■□□□□ 0.9
CDK9-202ENST00000421939 CBX3Q13185 183 aa20.69■□□□□ 0.9
CDK9-202ENST00000421939 RTL8BQ17RB0 113 aa20.69■□□□□ 0.9
CDK9-202ENST00000421939 ZNF660Q6AZW8 331 aaPredicted RBP20.69■□□□□ 0.9
CDK9-202ENST00000421939 LCNL1Q6ZST4 164 aa20.69■□□□□ 0.9
CDK9-202ENST00000421939 C18orf65Q6ZTR6 163 aa20.69■□□□□ 0.9
CDK9-202ENST00000421939 GPR141Q7Z602 305 aa20.69■□□□□ 0.9
CDK9-202ENST00000421939 KLHL30-AS1Q8NEE0 82 aa20.69■□□□□ 0.9
CDK9-202ENST00000421939 COMMD3Q9UBI1 195 aa20.69■□□□□ 0.9
CDK9-202ENST00000421939 IGKV1D-13A0A0B4J2D9 117 aa20.68■□□□□ 0.9
CDK9-202ENST00000421939 IGKV1-13P0DP09 117 aa20.68■□□□□ 0.9
CDK9-202ENST00000421939 CX3CL1P78423 397 aa20.68■□□□□ 0.9
CDK9-202ENST00000421939 SAMD5Q5TGI4 173 aa20.68■□□□□ 0.9
CDK9-202ENST00000421939 BVESQ8NE79 360 aa20.68■□□□□ 0.9
CDK9-202ENST00000421939 ACOT12Q8WYK0 555 aa20.68■□□□□ 0.9
CDK9-202ENST00000421939 SNAPC3Q92966 411 aa20.68■□□□□ 0.9
CDK9-202ENST00000421939 HARBI1Q96MB7 349 aa20.68■□□□□ 0.9
CDK9-202ENST00000421939 TRAV41A0A0B4J266 112 aa20.67■□□□□ 0.9
CDK9-202ENST00000421939 G3V318 75 aa20.67■□□□□ 0.9
CDK9-202ENST00000421939 FCN1O00602 326 aa20.67■□□□□ 0.9
CDK9-202ENST00000421939 SLC25A17O43808 307 aa20.67■□□□□ 0.9
CDK9-202ENST00000421939 SLC22A5O76082 557 aa20.67■□□□□ 0.9
CDK9-202ENST00000421939 EIF4EP06730 217 aaKnown RBP20.67■□□□□ 0.9
CDK9-202ENST00000421939 FCER2P06734 321 aa20.67■□□□□ 0.9
CDK9-202ENST00000421939 RRASP10301 218 aa20.67■□□□□ 0.9
CDK9-202ENST00000421939 CD33P20138 364 aa20.67■□□□□ 0.9
CDK9-202ENST00000421939 RORCP51449 518 aa20.67■□□□□ 0.9
CDK9-202ENST00000421939 C8orf86Q6ZUL3 223 aa20.67■□□□□ 0.9
CDK9-202ENST00000421939 ZNF695Q8IW36 515 aa20.67■□□□□ 0.9
CDK9-202ENST00000421939 DDB2Q92466 427 aa20.67■□□□□ 0.9
CDK9-202ENST00000421939 IFT46Q9NQC8 304 aa20.67■□□□□ 0.9
CDK9-202ENST00000421939 TPSG1Q9NRR2 321 aa20.67■□□□□ 0.9
CDK9-202ENST00000421939 NECAP2Q9NVZ3 263 aa20.67■□□□□ 0.9
CDK9-202ENST00000421939 FBXO7Q9Y3I1 522 aa20.67■□□□□ 0.9
CDK9-202ENST00000421939 MEIS3P1A6NDR6 274 aa20.66■□□□□ 0.9
CDK9-202ENST00000421939 LINC00473A8K010 186 aa20.66■□□□□ 0.9
CDK9-202ENST00000421939 APOA1P02647 267 aa20.66■□□□□ 0.9
CDK9-202ENST00000421939 PSMB8P28062 276 aa20.66■□□□□ 0.9
CDK9-202ENST00000421939 PPIFP30405 207 aaKnown RBP20.66■□□□□ 0.9
CDK9-202ENST00000421939 LGALS7P47929 136 aa20.66■□□□□ 0.9
CDK9-202ENST00000421939 CRIP2P52943 208 aaPredicted RBP20.66■□□□□ 0.9
CDK9-202ENST00000421939 TMEM177Q53S58 311 aa20.66■□□□□ 0.9
CDK9-202ENST00000421939 ETV3LQ6ZN32 361 aa20.66■□□□□ 0.9
CDK9-202ENST00000421939 WFDC9Q8NEX5 89 aa20.66■□□□□ 0.9
CDK9-202ENST00000421939 ABHD5Q8WTS1 349 aa20.66■□□□□ 0.9
CDK9-202ENST00000421939 CMTM3Q96MX0 182 aa20.66■□□□□ 0.9
CDK9-202ENST00000421939 CLCC1Q96S66 551 aa20.66■□□□□ 0.9
CDK9-202ENST00000421939 RBMX2Q9Y388 322 aaKnown RBP20.66■□□□□ 0.9
CDK9-202ENST00000421939 CA2P00918 260 aa20.65■□□□□ 0.9
CDK9-202ENST00000421939 IGLV2-23P01705 113 aa20.65■□□□□ 0.9
CDK9-202ENST00000421939 ECSCRQ19T08 205 aa20.65■□□□□ 0.9
CDK9-202ENST00000421939 SHOXO15266 292 aa20.64■□□□□ 0.89
CDK9-202ENST00000421939 WIPF1O43516 503 aa20.64■□□□□ 0.89
CDK9-202ENST00000421939 IGLV2-14P01704 120 aa20.64■□□□□ 0.89
CDK9-202ENST00000421939 FCGR2CP31995 323 aa20.64■□□□□ 0.89
CDK9-202ENST00000421939 BEAN1Q3B7T3 259 aa20.64■□□□□ 0.89
CDK9-202ENST00000421939 C19orf54Q5BKX5 351 aa20.64■□□□□ 0.89
CDK9-202ENST00000421939 ZNF562Q6V9R5 426 aa20.64■□□□□ 0.89
CDK9-202ENST00000421939 KCTD9Q7L273 389 aa20.64■□□□□ 0.89
CDK9-202ENST00000421939 OR5AP2Q8NGF4 316 aa20.64■□□□□ 0.89
CDK9-202ENST00000421939 AP3S1Q92572 193 aa20.64■□□□□ 0.89
CDK9-202ENST00000421939 ANAPC10Q9UM13 185 aa20.64■□□□□ 0.89
CDK9-202ENST00000421939 A3GALT2U3KPV4 340 aa20.64■□□□□ 0.89
CDK9-202ENST00000421939 CRYZL1O95825 349 aa20.63■□□□□ 0.89
CDK9-202ENST00000421939 AADACP22760 399 aa20.63■□□□□ 0.89
CDK9-202ENST00000421939 CDX1P47902 265 aaPredicted RBP20.63■□□□□ 0.89
CDK9-202ENST00000421939 OXLD1Q5BKU9 147 aa20.63■□□□□ 0.89
CDK9-202ENST00000421939 MINDY2Q8NBR6 621 aa20.63■□□□□ 0.89
CDK9-202ENST00000421939 MYOZ3Q8TDC0 251 aa20.63■□□□□ 0.89
CDK9-202ENST00000421939 HPGDSO60760 199 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms