RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 TMPRSS2O15393 492 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 NDUFA2O43678 99 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 CLDN14O95500 239 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 TSPAN15O95858 294 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 SFTA3P0C7M3 94 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 NPBWR1P48145 328 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 OR2B8PP59922 312 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 EIF5AP63241 154 aaKnown RBP7.3□□□□□ -1.24
SNCA-206ENST00000420646 PRB3Q04118 309 aaPredicted RBP7.3□□□□□ -1.24
SNCA-206ENST00000420646 TMEM108Q6UXF1 575 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 CCL17Q92583 94 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 CELSR2Q9HCU4 2923 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 A0A1B0GU03 582 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 SPINT2O43291 252 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 FCGR3BO75015 233 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 PRB1P04280 392 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 GNG10P50151 68 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 MRGPRGQ86SM5 289 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 THNSL2Q86YJ6 484 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 LINC01560Q8TB33 94 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 SAT2Q96F10 170 aaPredicted RBP7.3□□□□□ -1.24
SNCA-206ENST00000420646 C20orf24Q9BUV8 137 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 EIF5A2Q9GZV4 153 aaKnown RBP7.3□□□□□ -1.24
SNCA-206ENST00000420646 VSIRQ9H7M9 311 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 PSENENQ9NZ42 101 aa7.3□□□□□ -1.24
SNCA-206ENST00000420646 PLAUP00749 431 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 LOXL3P58215 753 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 SELENOVP59797 346 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 MORN2Q502X0 79 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 NKX6-2Q9C056 277 aaPredicted RBP7.29□□□□□ -1.24
SNCA-206ENST00000420646 C19orf12Q9NSK7 152 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 ZFP57Q9NU63 452 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 RNF7Q9UBF6 113 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 DNASE2O00115 360 aaPredicted RBP7.29□□□□□ -1.24
SNCA-206ENST00000420646 MGST3O14880 152 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 FBP1P09467 338 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 SEC11BP0C7V7 166 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 TUBG1P23258 451 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 COL8A2P25067 703 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 CEBPGP53567 150 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 F2RL1P55085 397 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 EIF4EBP1Q13541 118 aaPredicted RBP7.29□□□□□ -1.24
SNCA-206ENST00000420646 SLC25A24Q6NUK1 477 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 IL22RA2Q969J5 263 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 LURAP1Q96LR2 239 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 PARP11Q9NR21 331 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 TUBG2Q9NRH3 451 aa7.29□□□□□ -1.24
SNCA-206ENST00000420646 POLQO75417 2590 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 TRAV3A0A0B4J244 114 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 FAM90A27PA6NNH2 459 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 LYNX1G3V0Z9 82 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 M0R1X1 148 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 ZG16O60844 167 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 FCN3O75636 299 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 LYNX1P0DP58 116 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 DEFA4P12838 97 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 NDUFB7P17568 137 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 GPR12P47775 334 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 DLX1P56177 255 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 UBE2KP61086 200 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 ZNF273Q14593 569 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 EIF2S3LQ2VIR3 472 aaKnown RBP7.28□□□□□ -1.24
SNCA-206ENST00000420646 HIVEP3Q5T1R4 2406 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 TCF23Q7RTU1 214 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 SNX22Q96L94 193 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 SLC25A31Q9H0C2 315 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 RBKSQ9H477 322 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 CALYQ9NYX4 217 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 MSRB2Q9Y3D2 182 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 USP9XQ93008 2570 aaPredicted RBP7.28□□□□□ -1.24
SNCA-206ENST00000420646 RAI1Q7Z5J4 1906 aaPredicted RBP7.28□□□□□ -1.24
SNCA-206ENST00000420646 DUXBA0A1W2PPF3 345 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 HMGB3O15347 200 aaKnown RBP7.28□□□□□ -1.24
SNCA-206ENST00000420646 C17orf58Q2M2W7 97 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 Q8TCH9 128 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 SAV1Q9H4B6 383 aaPredicted RBP7.28□□□□□ -1.24
SNCA-206ENST00000420646 HCFC1P51610 2035 aa7.28□□□□□ -1.24
SNCA-206ENST00000420646 OR13C7P0DN81 318 aa7.27□□□□□ -1.24
SNCA-206ENST00000420646 DAOP14920 347 aa7.27□□□□□ -1.24
SNCA-206ENST00000420646 MYOD1P15172 320 aa7.27□□□□□ -1.24
SNCA-206ENST00000420646 SNCAP37840 140 aa7.27□□□□□ -1.24
SNCA-206ENST00000420646 SULT1A1P50225 295 aa7.27□□□□□ -1.24
SNCA-206ENST00000420646 RPL23AP62750 156 aaKnown RBP7.27□□□□□ -1.24
SNCA-206ENST00000420646 HAGHQ16775 308 aa7.27□□□□□ -1.24
SNCA-206ENST00000420646 CT45A1Q5HYN5 189 aa7.27□□□□□ -1.24
SNCA-206ENST00000420646 STX12Q86Y82 276 aa7.27□□□□□ -1.24
SNCA-206ENST00000420646 CT45A3Q8NHU0 189 aa7.27□□□□□ -1.24
SNCA-206ENST00000420646 RND1Q92730 232 aa7.27□□□□□ -1.24
SNCA-206ENST00000420646 LSM10Q969L4 123 aaKnown RBP7.27□□□□□ -1.24
SNCA-206ENST00000420646 GAFA1Q96PS6 74 aa7.27□□□□□ -1.24
SNCA-206ENST00000420646 IL19Q9UHD0 177 aa7.27□□□□□ -1.24
SNCA-206ENST00000420646 ZNF835Q9Y2P0 537 aa7.27□□□□□ -1.24
SNCA-206ENST00000420646 MARCH11A6NNE9 402 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 CD5P06127 495 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 OR9G9P0C7N8 305 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 GZMHP20718 246 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 DUTP33316 252 aaKnown RBP7.27□□□□□ -1.25
SNCA-206ENST00000420646 TNFRSF9Q07011 255 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 ZNF266Q14584 549 aa7.27□□□□□ -1.25
SNCA-206ENST00000420646 GUK1Q16774 197 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms