RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 NAA50Q9GZZ1 169 aaKnown RBP16.8■□□□□ 0.28
CPNE1-211ENST00000420363 OR51J1Q9H342 316 aa16.8■□□□□ 0.28
CPNE1-211ENST00000420363 SLC35D1Q9NTN3 355 aa16.8■□□□□ 0.28
CPNE1-211ENST00000420363 ZFP57Q9NU63 452 aa16.8■□□□□ 0.28
CPNE1-211ENST00000420363 NOTCH3Q9UM47 2321 aa16.8■□□□□ 0.28
CPNE1-211ENST00000420363 IGHV7-81A0A0B4J1V7 117 aa16.79■□□□□ 0.28
CPNE1-211ENST00000420363 TUSC2O75896 110 aa16.79■□□□□ 0.28
CPNE1-211ENST00000420363 APOA1P02647 267 aa16.79■□□□□ 0.28
CPNE1-211ENST00000420363 RORCP51449 518 aa16.79■□□□□ 0.28
CPNE1-211ENST00000420363 LUMP51884 338 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-211ENST00000420363 ARPC4P59998 168 aa16.79■□□□□ 0.28
CPNE1-211ENST00000420363 RPL23AP62750 156 aaKnown RBP16.79■□□□□ 0.28
CPNE1-211ENST00000420363 FOXE3Q13461 319 aa16.79■□□□□ 0.28
CPNE1-211ENST00000420363 KHDC1LQ5JSQ8 128 aa16.79■□□□□ 0.28
CPNE1-211ENST00000420363 LIN54Q6MZP7 749 aa16.79■□□□□ 0.28
CPNE1-211ENST00000420363 FLYWCH2Q96CP2 140 aaKnown RBP16.79■□□□□ 0.28
CPNE1-211ENST00000420363 A0A1W2PRX2 142 aa16.78■□□□□ 0.28
CPNE1-211ENST00000420363 IGHG4P01861 327 aa16.78■□□□□ 0.28
CPNE1-211ENST00000420363 ELANEP08246 267 aa16.78■□□□□ 0.28
CPNE1-211ENST00000420363 RRASP10301 218 aa16.78■□□□□ 0.28
CPNE1-211ENST00000420363 PF4V1P10720 104 aa16.78■□□□□ 0.28
CPNE1-211ENST00000420363 NFYAP23511 347 aaPredicted RBP16.78■□□□□ 0.28
CPNE1-211ENST00000420363 DUTP33316 252 aaKnown RBP16.78■□□□□ 0.28
CPNE1-211ENST00000420363 CRIP2P52943 208 aaPredicted RBP16.78■□□□□ 0.28
CPNE1-211ENST00000420363 TAS2R20P59543 309 aa16.78■□□□□ 0.28
CPNE1-211ENST00000420363 CBX3Q13185 183 aa16.78■□□□□ 0.28
CPNE1-211ENST00000420363 GPR107Q5VW38 600 aa16.78■□□□□ 0.28
CPNE1-211ENST00000420363 GVQW1Q8N7I0 195 aa16.78■□□□□ 0.28
CPNE1-211ENST00000420363 ANAPC10Q9UM13 185 aa16.78■□□□□ 0.28
CPNE1-211ENST00000420363 PLXNB1O43157 2135 aa16.78■□□□□ 0.28
CPNE1-211ENST00000420363 LINC00205P59089 165 aa16.77■□□□□ 0.28
CPNE1-211ENST00000420363 PLGLAQ15195 96 aa16.77■□□□□ 0.28
CPNE1-211ENST00000420363 RTL8BQ17RB0 113 aa16.77■□□□□ 0.28
CPNE1-211ENST00000420363 SAMD5Q5TGI4 173 aa16.77■□□□□ 0.28
CPNE1-211ENST00000420363 ZNF660Q6AZW8 331 aaPredicted RBP16.77■□□□□ 0.28
CPNE1-211ENST00000420363 DDB2Q92466 427 aa16.77■□□□□ 0.28
CPNE1-211ENST00000420363 AP3S1Q92572 193 aa16.77■□□□□ 0.28
CPNE1-211ENST00000420363 SNAPC3Q92966 411 aa16.77■□□□□ 0.28
CPNE1-211ENST00000420363 FBXL15Q9H469 300 aa16.77■□□□□ 0.28
CPNE1-211ENST00000420363 NECAP2Q9NVZ3 263 aa16.77■□□□□ 0.28
CPNE1-211ENST00000420363 COMMD3Q9UBI1 195 aa16.77■□□□□ 0.28
CPNE1-211ENST00000420363 ATP6V0E1O15342 81 aa16.76■□□□□ 0.27
CPNE1-211ENST00000420363 EIF4EP06730 217 aaKnown RBP16.76■□□□□ 0.27
CPNE1-211ENST00000420363 LGALS7P47929 136 aa16.76■□□□□ 0.27
CPNE1-211ENST00000420363 RPS16P62249 146 aaKnown RBP16.76■□□□□ 0.27
CPNE1-211ENST00000420363 PSG5Q15238 335 aa16.76■□□□□ 0.27
CPNE1-211ENST00000420363 MSMO1Q15800 293 aa16.76■□□□□ 0.27
CPNE1-211ENST00000420363 TMEM177Q53S58 311 aa16.76■□□□□ 0.27
CPNE1-211ENST00000420363 CXorf66Q5JRM2 361 aaPredicted RBP16.76■□□□□ 0.27
CPNE1-211ENST00000420363 KPRPQ5T749 579 aaPredicted RBP16.76■□□□□ 0.27
CPNE1-211ENST00000420363 BCL7BQ9BQE9 202 aa16.76■□□□□ 0.27
CPNE1-211ENST00000420363 PARP11Q9NR21 331 aa16.76■□□□□ 0.27
CPNE1-211ENST00000420363 METTL1Q9UBP6 276 aaKnown RBP16.76■□□□□ 0.27
CPNE1-211ENST00000420363 IGKV1D-13A0A0B4J2D9 117 aa16.75■□□□□ 0.27
CPNE1-211ENST00000420363 PRB2P02812 416 aaPredicted RBP16.75■□□□□ 0.27
CPNE1-211ENST00000420363 IGKV1-13P0DP09 117 aa16.75■□□□□ 0.27
CPNE1-211ENST00000420363 PTHLHP12272 177 aa16.75■□□□□ 0.27
CPNE1-211ENST00000420363 PPIFP30405 207 aaKnown RBP16.75■□□□□ 0.27
CPNE1-211ENST00000420363 NDPQ00604 133 aa16.75■□□□□ 0.27
CPNE1-211ENST00000420363 MZT2AQ6P582 158 aa16.75■□□□□ 0.27
CPNE1-211ENST00000420363 OVCH2Q7RTZ1 564 aa16.75■□□□□ 0.27
CPNE1-211ENST00000420363 REC114Q7Z4M0 266 aa16.75■□□□□ 0.27
CPNE1-211ENST00000420363 OR5AP2Q8NGF4 316 aa16.75■□□□□ 0.27
CPNE1-211ENST00000420363 IFT46Q9NQC8 304 aa16.75■□□□□ 0.27
CPNE1-211ENST00000420363 RBMX2Q9Y388 322 aaKnown RBP16.75■□□□□ 0.27
CPNE1-211ENST00000420363 IGLV2-14P01704 120 aa16.74■□□□□ 0.27
CPNE1-211ENST00000420363 PF4P02776 101 aa16.74■□□□□ 0.27
CPNE1-211ENST00000420363 ZNF182P17025 639 aaPredicted RBP16.74■□□□□ 0.27
CPNE1-211ENST00000420363 PSMB8P28062 276 aa16.74■□□□□ 0.27
CPNE1-211ENST00000420363 CX3CL1P78423 397 aa16.74■□□□□ 0.27
CPNE1-211ENST00000420363 TCTEX1D1Q8N7M0 179 aa16.74■□□□□ 0.27
CPNE1-211ENST00000420363 RAB2BQ8WUD1 216 aa16.74■□□□□ 0.27
CPNE1-211ENST00000420363 HARBI1Q96MB7 349 aa16.74■□□□□ 0.27
CPNE1-211ENST00000420363 TRAV41A0A0B4J266 112 aa16.73■□□□□ 0.27
CPNE1-211ENST00000420363 SMIM31A0A1B0GVY4 71 aa16.73■□□□□ 0.27
CPNE1-211ENST00000420363 LINC00473A8K010 186 aa16.73■□□□□ 0.27
CPNE1-211ENST00000420363 IGLV2-23P01705 113 aa16.73■□□□□ 0.27
CPNE1-211ENST00000420363 NAT1P18440 290 aa16.73■□□□□ 0.27
CPNE1-211ENST00000420363 PRSS3P35030 304 aa16.73■□□□□ 0.27
CPNE1-211ENST00000420363 C19orf54Q5BKX5 351 aa16.73■□□□□ 0.27
CPNE1-211ENST00000420363 ZNF562Q6V9R5 426 aa16.73■□□□□ 0.27
CPNE1-211ENST00000420363 BVESQ8NE79 360 aa16.73■□□□□ 0.27
CPNE1-211ENST00000420363 WFDC9Q8NEX5 89 aa16.73■□□□□ 0.27
CPNE1-211ENST00000420363 MYOZ3Q8TDC0 251 aa16.73■□□□□ 0.27
CPNE1-211ENST00000420363 HSD17B10Q99714 261 aaKnown RBP16.73■□□□□ 0.27
CPNE1-211ENST00000420363 SCPEP1Q9HB40 452 aa16.73■□□□□ 0.27
CPNE1-211ENST00000420363 ADAM30Q9UKF2 790 aa16.73■□□□□ 0.27
CPNE1-211ENST00000420363 SLC25A17O43808 307 aa16.72■□□□□ 0.27
CPNE1-211ENST00000420363 PPYP01298 95 aa16.72■□□□□ 0.27
CPNE1-211ENST00000420363 IGLV1-40P01703 118 aa16.72■□□□□ 0.27
CPNE1-211ENST00000420363 RPLP1P05386 114 aaKnown RBP16.72■□□□□ 0.27
CPNE1-211ENST00000420363 FCGR2CP31995 323 aa16.72■□□□□ 0.27
CPNE1-211ENST00000420363 CDK10Q15131 360 aa16.72■□□□□ 0.27
CPNE1-211ENST00000420363 KCTD9Q7L273 389 aa16.72■□□□□ 0.27
CPNE1-211ENST00000420363 ZNF695Q8IW36 515 aa16.72■□□□□ 0.27
CPNE1-211ENST00000420363 MINDY2Q8NBR6 621 aa16.72■□□□□ 0.27
CPNE1-211ENST00000420363 KLHL30-AS1Q8NEE0 82 aa16.72■□□□□ 0.27
CPNE1-211ENST00000420363 OSR1Q8TAX0 266 aaPredicted RBP16.72■□□□□ 0.27
CPNE1-211ENST00000420363 MRPS7Q9Y2R9 242 aaKnown RBP16.72■□□□□ 0.27
CPNE1-211ENST00000420363 PRELID3BQ9Y3B1 194 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms