RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 ZNF816Q0VGE8 651 aaPredicted RBP11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 KRTAP21-3Q3LHN1 58 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 ZNF585BQ52M93 769 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 MINOS1Q5TGZ0 78 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 DHRS7BQ6IAN0 325 aaPredicted RBP11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 AKAP14Q86UN6 197 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 LYG1Q8N1E2 194 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 LINC01356Q8N9X3 169 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 OR5AN1Q8NGI8 311 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 OR4P4Q8NGL7 312 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 OR10X1Q8NGY0 326 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 RBPMSQ93062 196 aaKnown RBP11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 ST6GAL2Q96JF0 529 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 PLEKHA2Q9HB19 425 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 PRELID3BQ9Y3B1 194 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 MINOS1-NBL1R4GNA1 71 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 DOCK11Q5JSL3 2073 aa11.59□□□□□ -0.55
SHMT1P1-201ENST00000419974 LINC00473A8K010 186 aa11.59□□□□□ -0.55
SHMT1P1-201ENST00000419974 PFDN1O60925 122 aa11.59□□□□□ -0.55
SHMT1P1-201ENST00000419974 ATG12O94817 140 aa11.59□□□□□ -0.55
SHMT1P1-201ENST00000419974 TOX4O94842 621 aa11.59□□□□□ -0.55
SHMT1P1-201ENST00000419974 GIPP09681 153 aaPredicted RBP11.59□□□□□ -0.55
SHMT1P1-201ENST00000419974 RRASP10301 218 aa11.59□□□□□ -0.55
SHMT1P1-201ENST00000419974 CXCL3P19876 107 aa11.59□□□□□ -0.55
SHMT1P1-201ENST00000419974 VDAC1P21796 283 aa11.59□□□□□ -0.55
SHMT1P1-201ENST00000419974 RPL30P62888 115 aaKnown RBP11.59□□□□□ -0.55
SHMT1P1-201ENST00000419974 SLC9A3R2Q15599 337 aa11.59□□□□□ -0.55
SHMT1P1-201ENST00000419974 LIN54Q6MZP7 749 aa11.59□□□□□ -0.55
SHMT1P1-201ENST00000419974 C1orf229Q6ZS94 237 aaPredicted RBP11.59□□□□□ -0.55
SHMT1P1-201ENST00000419974 VMO1Q7Z5L0 202 aa11.59□□□□□ -0.55
SHMT1P1-201ENST00000419974 CASTOR1Q8WTX7 329 aa11.59□□□□□ -0.55
SHMT1P1-201ENST00000419974 LSM10Q969L4 123 aaKnown RBP11.59□□□□□ -0.55
SHMT1P1-201ENST00000419974 ZNF436Q9C0F3 470 aaPredicted RBP11.59□□□□□ -0.55
SHMT1P1-201ENST00000419974 TBL2Q9Y4P3 447 aaKnown RBP11.59□□□□□ -0.55
SHMT1P1-201ENST00000419974 M0R1X1 148 aa11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 CCNKO75909 580 aa11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 SERPINE2P07093 398 aa11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 CT45A6P0DMU7 189 aa11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 CT45A5P0DMU8 189 aa11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 CT45A7P0DMV0 189 aa11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 CEACAM3P40198 252 aa11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 GZMKP49863 264 aa11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 GNG10P50151 68 aa11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 H2BFSP57053 126 aa11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 CYCSP99999 105 aaKnown RBP11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 HABP2Q14520 560 aaPredicted RBP11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 MIDNQ504T8 468 aa11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 RPL39P5Q59GN2 51 aa11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 FAM219AQ8IW50 185 aa11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 SELENOHQ8IZQ5 122 aaKnown RBP11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 TBX15Q96SF7 602 aa11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 NMES1Q9C002 83 aa11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 LPAR2Q9HBW0 351 aa11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 COMMD9Q9P000 198 aa11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 MGAT4CQ9UBM8 478 aa11.58□□□□□ -0.56
SHMT1P1-201ENST00000419974 FAM90A9PA6NNJ1 464 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 LEUTXA8MZ59 168 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 RNASEK-C17orf49H0YIS7 233 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 TNFSF12O43508 249 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 HPRT1P00492 218 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 IFNA21P01568 189 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 GAPDHP04406 335 aaKnown RBP11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 FGF2P09038 288 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 HOXB4P17483 251 aaPredicted RBP11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 HTR1DP28221 377 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 MC5RP33032 325 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 BPIFB3P59826 476 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 RAP2BP61225 183 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 IL15RAQ13261 267 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 POU2AF1Q16633 256 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 SP6Q3SY56 376 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 NMSQ5H8A3 153 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 ZNF695Q8IW36 515 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 PNKDQ8N490 385 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 OR51H1Q8NH63 302 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 LHFPL5Q8TAF8 219 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 NABP2Q9BQ15 211 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 AIFM2Q9BRQ8 373 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 COA4Q9NYJ1 87 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 DPM3Q9P2X0 92 aa11.57□□□□□ -0.56
SHMT1P1-201ENST00000419974 A0A1W2PPE3 182 aa11.56□□□□□ -0.56
SHMT1P1-201ENST00000419974 IGHV3-7P01780 117 aa11.56□□□□□ -0.56
SHMT1P1-201ENST00000419974 P0C879 139 aa11.56□□□□□ -0.56
SHMT1P1-201ENST00000419974 C2orf68Q2NKX9 166 aa11.56□□□□□ -0.56
SHMT1P1-201ENST00000419974 SPAG16Q8N0X2 631 aa11.56□□□□□ -0.56
SHMT1P1-201ENST00000419974 OR8H3Q8N146 312 aa11.56□□□□□ -0.56
SHMT1P1-201ENST00000419974 ZNF383Q8NA42 475 aa11.56□□□□□ -0.56
SHMT1P1-201ENST00000419974 OR4S2Q8NH73 311 aa11.56□□□□□ -0.56
SHMT1P1-201ENST00000419974 TCTEX1D2Q8WW35 142 aa11.56□□□□□ -0.56
SHMT1P1-201ENST00000419974 MALSU1Q96EH3 234 aa11.56□□□□□ -0.56
SHMT1P1-201ENST00000419974 Q96MF0 132 aa11.56□□□□□ -0.56
SHMT1P1-201ENST00000419974 RNF5Q99942 180 aa11.56□□□□□ -0.56
SHMT1P1-201ENST00000419974 RNF223E7ERA6 249 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 H0YJW9 148 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 SNAPC5O75971 98 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 IGKV1-39P01597 117 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 IGKV1D-39P04432 117 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 EPHA1P21709 976 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 RAB13P51153 203 aa11.55□□□□□ -0.56
SHMT1P1-201ENST00000419974 TMEM249Q2WGJ8 235 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms