RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 KIAA1324LA8MWY0 1029 aaPredicted RBP17■□□□□ 0.31
CASC3-203ENST00000418132 SAA2P0DJI9 122 aaPredicted RBP17■□□□□ 0.31
CASC3-203ENST00000418132 IAH1Q2TAA2 248 aaPredicted RBP17■□□□□ 0.31
CASC3-203ENST00000418132 C1orf229Q6ZS94 237 aaPredicted RBP17■□□□□ 0.31
CASC3-203ENST00000418132 LYG1Q8N1E2 194 aa17■□□□□ 0.31
CASC3-203ENST00000418132 LINC00311Q8N616 119 aa17■□□□□ 0.31
CASC3-203ENST00000418132 TCTEX1D2Q8WW35 142 aa17■□□□□ 0.31
CASC3-203ENST00000418132 PIMREGQ9BSJ6 248 aa17■□□□□ 0.31
CASC3-203ENST00000418132 RNF126Q9BV68 326 aa17■□□□□ 0.31
CASC3-203ENST00000418132 TMEM133Q9H2Q1 129 aa17■□□□□ 0.31
CASC3-203ENST00000418132 PTPN13Q12923 2485 aa16.99■□□□□ 0.31
CASC3-203ENST00000418132 DOPEY2Q9Y3R5 2298 aa16.99■□□□□ 0.31
CASC3-203ENST00000418132 KCNAB3O43448 404 aa16.99■□□□□ 0.31
CASC3-203ENST00000418132 SPDEFO95238 335 aa16.99■□□□□ 0.31
CASC3-203ENST00000418132 IGKV1-39P01597 117 aa16.99■□□□□ 0.31
CASC3-203ENST00000418132 IGKV1D-39P04432 117 aa16.99■□□□□ 0.31
CASC3-203ENST00000418132 BRWD1-AS2P59051 145 aa16.99■□□□□ 0.31
CASC3-203ENST00000418132 SCARB1Q8WTV0 552 aa16.99■□□□□ 0.31
CASC3-203ENST00000418132 CELSR2Q9HCU4 2923 aa16.99■□□□□ 0.31
CASC3-203ENST00000418132 VWC2LB2RUY7 222 aa16.98■□□□□ 0.31
CASC3-203ENST00000418132 M0R1X1 148 aa16.98■□□□□ 0.31
CASC3-203ENST00000418132 VDAC1P21796 283 aa16.98■□□□□ 0.31
CASC3-203ENST00000418132 CLEC2AQ6UVW9 174 aa16.98■□□□□ 0.31
CASC3-203ENST00000418132 INO80EQ8NBZ0 244 aaPredicted RBP16.98■□□□□ 0.31
CASC3-203ENST00000418132 hCG_1809904A0A1W2PP81 198 aa16.98■□□□□ 0.31
CASC3-203ENST00000418132 A0A1W2PPE2 198 aa16.98■□□□□ 0.31
CASC3-203ENST00000418132 A0A1W2PR64 198 aa16.98■□□□□ 0.31
CASC3-203ENST00000418132 A0A1W2PRV1 198 aa16.98■□□□□ 0.31
CASC3-203ENST00000418132 A8MXK9 166 aa16.98■□□□□ 0.31
CASC3-203ENST00000418132 J3QR06 171 aa16.98■□□□□ 0.31
CASC3-203ENST00000418132 LINC00205P59089 165 aa16.98■□□□□ 0.31
CASC3-203ENST00000418132 NMSQ5H8A3 153 aa16.98■□□□□ 0.31
CASC3-203ENST00000418132 OR9G1Q8NH87 305 aa16.98■□□□□ 0.31
CASC3-203ENST00000418132 PERPQ96FX8 193 aa16.98■□□□□ 0.31
CASC3-203ENST00000418132 ZNRD1Q9P1U0 126 aa16.98■□□□□ 0.31
CASC3-203ENST00000418132 KANTRA0A1W2PQU2 76 aa16.97■□□□□ 0.31
CASC3-203ENST00000418132 H0YIZ8 118 aa16.97■□□□□ 0.31
CASC3-203ENST00000418132 ZFP36P26651 326 aaKnown RBP16.97■□□□□ 0.31
CASC3-203ENST00000418132 KRTAP10-9P60411 292 aa16.97■□□□□ 0.31
CASC3-203ENST00000418132 NCR3LG1Q68D85 454 aa16.97■□□□□ 0.31
CASC3-203ENST00000418132 COMMD7Q86VX2 200 aa16.97■□□□□ 0.31
CASC3-203ENST00000418132 SPAG16Q8N0X2 631 aa16.97■□□□□ 0.31
CASC3-203ENST00000418132 ABHD12Q8N2K0 398 aa16.97■□□□□ 0.31
CASC3-203ENST00000418132 DCUN1D4Q92564 292 aa16.97■□□□□ 0.31
CASC3-203ENST00000418132 BCL2L11O43521 198 aa16.97■□□□□ 0.31
CASC3-203ENST00000418132 RAMP3O60896 148 aa16.97■□□□□ 0.31
CASC3-203ENST00000418132 S1PR3Q99500 378 aa16.97■□□□□ 0.31
CASC3-203ENST00000418132 GSKIPQ9P0R6 139 aa16.97■□□□□ 0.31
CASC3-203ENST00000418132 ONECUT1Q9UBC0 465 aa16.97■□□□□ 0.31
CASC3-203ENST00000418132 M0R1W7 72 aa16.96■□□□□ 0.31
CASC3-203ENST00000418132 RLN2P04090 185 aa16.96■□□□□ 0.31
CASC3-203ENST00000418132 LPAR6P43657 344 aa16.96■□□□□ 0.31
CASC3-203ENST00000418132 OR2B11Q5JQS5 317 aa16.96■□□□□ 0.31
CASC3-203ENST00000418132 Q8N7P7 452 aa16.96■□□□□ 0.31
CASC3-203ENST00000418132 CD300LFQ8TDQ1 290 aa16.96■□□□□ 0.31
CASC3-203ENST00000418132 ST8SIA2Q92186 375 aa16.96■□□□□ 0.31
CASC3-203ENST00000418132 DDB2Q92466 427 aa16.96■□□□□ 0.31
CASC3-203ENST00000418132 ARHGAP32A7KAX9 2087 aa16.96■□□□□ 0.31
CASC3-203ENST00000418132 RRASP10301 218 aa16.95■□□□□ 0.3
CASC3-203ENST00000418132 UBA52P62987 128 aaKnown RBP16.95■□□□□ 0.3
CASC3-203ENST00000418132 PAX2Q02962 417 aa16.95■□□□□ 0.3
CASC3-203ENST00000418132 ZNF833PQ6ZTB9 187 aa16.95■□□□□ 0.3
CASC3-203ENST00000418132 TNFRSF14Q92956 283 aa16.95■□□□□ 0.3
CASC3-203ENST00000418132 MARVELD3Q96A59 401 aa16.95■□□□□ 0.3
CASC3-203ENST00000418132 IGHV2-26A0A0B4J1V2 119 aa16.95■□□□□ 0.3
CASC3-203ENST00000418132 NMBP08949 121 aa16.95■□□□□ 0.3
CASC3-203ENST00000418132 ZNF137PP52743 207 aa16.95■□□□□ 0.3
CASC3-203ENST00000418132 DSCR9P59020 149 aa16.95■□□□□ 0.3
CASC3-203ENST00000418132 RAB32Q13637 225 aa16.95■□□□□ 0.3
CASC3-203ENST00000418132 FAM219AQ8IW50 185 aa16.95■□□□□ 0.3
CASC3-203ENST00000418132 KIR3DL3Q8N743 410 aa16.95■□□□□ 0.3
CASC3-203ENST00000418132 LSM10Q969L4 123 aaKnown RBP16.95■□□□□ 0.3
CASC3-203ENST00000418132 ADTRPQ96IZ2 230 aa16.95■□□□□ 0.3
CASC3-203ENST00000418132 SPIN2AQ99865 258 aa16.95■□□□□ 0.3
CASC3-203ENST00000418132 SPIN2BQ9BPZ2 258 aa16.95■□□□□ 0.3
CASC3-203ENST00000418132 RBFOX2O43251 390 aaKnown RBP eCLIP16.94■□□□□ 0.31e-5■■■■□ 20.3
CASC3-203ENST00000418132 ENSAO43768 121 aaKnown RBP16.94■□□□□ 0.3
CASC3-203ENST00000418132 IGKV1-5P01602 117 aa16.94■□□□□ 0.3
CASC3-203ENST00000418132 THBS3P49746 956 aa16.94■□□□□ 0.3
CASC3-203ENST00000418132 ARF6P62330 175 aa16.94■□□□□ 0.3
CASC3-203ENST00000418132 PRSS54Q6PEW0 395 aa16.94■□□□□ 0.3
CASC3-203ENST00000418132 C1orf122Q6ZSJ8 110 aa16.94■□□□□ 0.3
CASC3-203ENST00000418132 RRNAD1Q96FB5 475 aaKnown RBP16.94■□□□□ 0.3
CASC3-203ENST00000418132 OR5AC2Q9NZP5 309 aa16.94■□□□□ 0.3
CASC3-203ENST00000418132 PRELID3BQ9Y3B1 194 aa16.94■□□□□ 0.3
CASC3-203ENST00000418132 ANKRD17O75179 2603 aaKnown RBP16.94■□□□□ 0.3
CASC3-203ENST00000418132 A0A0G2JRQ6 117 aa16.93■□□□□ 0.3
CASC3-203ENST00000418132 IGLV1-47P01700 117 aa16.93■□□□□ 0.3
CASC3-203ENST00000418132 LYL1P12980 280 aa16.93■□□□□ 0.3
CASC3-203ENST00000418132 ZNF816Q0VGE8 651 aaPredicted RBP16.93■□□□□ 0.3
CASC3-203ENST00000418132 FAM71F2Q6NXP2 309 aa16.93■□□□□ 0.3
CASC3-203ENST00000418132 OR4D5Q8NGN0 318 aa16.93■□□□□ 0.3
CASC3-203ENST00000418132 OR10X1Q8NGY0 326 aa16.93■□□□□ 0.3
CASC3-203ENST00000418132 ST6GALNAC6Q969X2 333 aa16.93■□□□□ 0.3
CASC3-203ENST00000418132 ZNF471Q9BX82 626 aaPredicted RBP16.93■□□□□ 0.3
CASC3-203ENST00000418132 CLEC7AQ9BXN2 247 aa16.93■□□□□ 0.3
CASC3-203ENST00000418132 ASH1LQ9NR48 2969 aaKnown RBP16.93■□□□□ 0.3
CASC3-203ENST00000418132 ABCA12Q86UK0 2595 aa16.93■□□□□ 0.3
CASC3-203ENST00000418132 IGHV4-30-2A0A087WSY4 118 aa16.93■□□□□ 0.3
CASC3-203ENST00000418132 IGHV4-61A0A0C4DH41 118 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms